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CcUC10G191780 (gene) of Watermelon (PI 537277) v1 genome

Gene IDCcUC10G191780
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionNADH-ubiquinone oxidoreductase chain 1
Genome locationCicolChr10:8043359..8049639
RNA-Seq ExpressionCcUC10G191780
SyntenyCcUC10G191780
Gene Ontology termsGO:0009060 - aerobic respiration (biological process)
GO:0017004 - cytochrome complex assembly (biological process)
GO:0022900 - electron transport chain (biological process)
GO:0005747 - mitochondrial respiratory chain complex I (cellular component)
GO:0005886 - plasma membrane (cellular component)
GO:0008137 - NADH dehydrogenase (ubiquinone) activity (molecular function)
InterPro domainsIPR001694 - NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H
IPR018086 - NADH:ubiquinone oxidoreductase, subunit 1, conserved site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GAU48502.1 hypothetical protein TSUD_291880 [Trifolium subterraneum]7.2e-1373.77Show/hide
Query:  DQETNRAPFDLSEAEAESVAGYNVEYARDAILNIRLLAEANVPGLQHLKLLSFR--CFLNC
        D ETNRAPFDL EAEAESVAGYNVEYARDAILN  LLAEANVPG + L L   R  C+++C
Subjt:  DQETNRAPFDLSEAEAESVAGYNVEYARDAILNIRLLAEANVPGLQHLKLLSFR--CFLNC

KAG8362740.1 hypothetical protein BUALT_BualtUnG0037000 [Buddleja alternifolia]8.0e-1279.63Show/hide
Query:  DQETNRAPFDLSEAEAESVAGYNVEYARDAILNIRLLAEANVPGLQHLKLLSFR
        D ETNRAPFDL EAEAESVAGYNVEYARDAILN  LLAEANVPG + L L   R
Subjt:  DQETNRAPFDLSEAEAESVAGYNVEYARDAILNIRLLAEANVPGLQHLKLLSFR

KAG8363147.1 hypothetical protein BUALT_BualtMtG0000600 [Buddleja alternifolia]8.0e-1279.63Show/hide
Query:  DQETNRAPFDLSEAEAESVAGYNVEYARDAILNIRLLAEANVPGLQHLKLLSFR
        D ETNRAPFDL EAEAESVAGYNVEYARDAILN  LLAEANVPG + L L   R
Subjt:  DQETNRAPFDLSEAEAESVAGYNVEYARDAILNIRLLAEANVPGLQHLKLLSFR

KAG8363198.1 hypothetical protein BUALT_BualtMtG0008600 [Buddleja alternifolia]8.0e-1279.63Show/hide
Query:  DQETNRAPFDLSEAEAESVAGYNVEYARDAILNIRLLAEANVPGLQHLKLLSFR
        D ETNRAPFDL EAEAESVAGYNVEYARDAILN  LLAEANVPG + L L   R
Subjt:  DQETNRAPFDLSEAEAESVAGYNVEYARDAILNIRLLAEANVPGLQHLKLLSFR

PHT91423.1 hypothetical protein T459_06536 [Capsicum annuum]6.1e-1275.44Show/hide
Query:  GNEDQETNRAPFDLSEAEAESVAGYNVEYARDAILNIRLLAEANVPGLQHLKLLSFR
        G   +ETNRAPFDL EAEAESVAGYNVEYARDAILN  LLAEANVPG + L L   R
Subjt:  GNEDQETNRAPFDLSEAEAESVAGYNVEYARDAILNIRLLAEANVPGLQHLKLLSFR

TrEMBL top hitse value%identityAlignment
A0A2G2Y443 Uncharacterized protein3.9e-1279.63Show/hide
Query:  DQETNRAPFDLSEAEAESVAGYNVEYARDAILNIRLLAEANVPGLQHLKLLSFR
        D ETNRAPFDL EAEAESVAGYNVEYARDAILN  LLAEANVPG + L L   R
Subjt:  DQETNRAPFDLSEAEAESVAGYNVEYARDAILNIRLLAEANVPGLQHLKLLSFR

A0A2G3AB70 Uncharacterized protein3.0e-1275.44Show/hide
Query:  GNEDQETNRAPFDLSEAEAESVAGYNVEYARDAILNIRLLAEANVPGLQHLKLLSFR
        G   +ETNRAPFDL EAEAESVAGYNVEYARDAILN  LLAEANVPG + L L   R
Subjt:  GNEDQETNRAPFDLSEAEAESVAGYNVEYARDAILNIRLLAEANVPGLQHLKLLSFR

A0A2Z6PFE9 Uncharacterized protein3.5e-1373.77Show/hide
Query:  DQETNRAPFDLSEAEAESVAGYNVEYARDAILNIRLLAEANVPGLQHLKLLSFR--CFLNC
        D ETNRAPFDL EAEAESVAGYNVEYARDAILN  LLAEANVPG + L L   R  C+++C
Subjt:  DQETNRAPFDLSEAEAESVAGYNVEYARDAILNIRLLAEANVPGLQHLKLLSFR--CFLNC

A0A6S7MSI8 Uncharacterized protein8.6e-1280.77Show/hide
Query:  ETNRAPFDLSEAEAESVAGYNVEYARDAILNIRLLAEANVPGLQHLKLLSFR
        ETNRAPFDL EAEAESVAGYNVEYARDAILN  LLAEANVPG + L L   R
Subjt:  ETNRAPFDLSEAEAESVAGYNVEYARDAILNIRLLAEANVPGLQHLKLLSFR

A0A7J6DW66 NADH-ubiquinone oxidoreductase chain 18.6e-1262.67Show/hide
Query:  ETNRAPFDLSEAEAESVAGYNVEYARDAILNIRLLAEANVPGLQHLKLLSFR----CF---LNCVYIRIFGVESG
        ETNRAPFDL EAEAESVAGYNVEYARDAILN  LLAEANVPG + L L   R    C+   L  +++++  V SG
Subjt:  ETNRAPFDLSEAEAESVAGYNVEYARDAILNIRLLAEANVPGLQHLKLLSFR----CF---LNCVYIRIFGVESG

SwissProt top hitse value%identityAlignment
O78711 NADH-ubiquinone oxidoreductase chain 12.0e-0542.65Show/hide
Query:  ETNRAPFDLSEAEAESVAGYNVEY-----------------ARDAILNIRLLAEANVPGLQHLKLLSF
        ETNRAPFDL+E E+E V+G+NVEY                 A +AI  I  L  + +P L HL  +SF
Subjt:  ETNRAPFDLSEAEAESVAGYNVEY-----------------ARDAILNIRLLAEANVPGLQHLKLLSF

P08834 NADH-ubiquinone oxidoreductase chain 19.8e-1390.48Show/hide
Query:  ETNRAPFDLSEAEAESVAGYNVEYARDAILNIRLLAEANVPG
        ETNRAPFDL EAEAESVAGYNVEYA DAILN  LLAEANVPG
Subjt:  ETNRAPFDLSEAEAESVAGYNVEYARDAILNIRLLAEANVPG

P23650 NADH-ubiquinone oxidoreductase chain 19.8e-0549.02Show/hide
Query:  ETNRAPFDLSEAEAESVAGYNVEYARDAILNIRLLAEANVPGLQHLKLLSF
        ETNRAPFDL+E E+E V+GYNVEYA        +   AN+  +  L +L F
Subjt:  ETNRAPFDLSEAEAESVAGYNVEYARDAILNIRLLAEANVPGLQHLKLLSF

P26845 NADH-ubiquinone oxidoreductase chain 14.4e-0550Show/hide
Query:  ETNRAPFDLSEAEAESVAGYNVEYARDAILNIRLLAEANVPGLQHL-KLLSFRCFLNCVYIRIFGVESGS
        ETNRAPFDL EAEAE VAGYNVEY+        L   AN+  +  L  LL    +L  + I IF V  GS
Subjt:  ETNRAPFDLSEAEAESVAGYNVEYARDAILNIRLLAEANVPGLQHL-KLLSFRCFLNCVYIRIFGVESGS

Q01300 NADH-ubiquinone oxidoreductase chain 13.4e-0592Show/hide
Query:  ETNRAPFDLSEAEAESVAGYNVEYA
        ETNRAPFDL EAEAESVAGYNVEY+
Subjt:  ETNRAPFDLSEAEAESVAGYNVEYA

Arabidopsis top hitse value%identityAlignment
ATMG00516.1 NADH dehydrogenase 1C2.4e-0692Show/hide
Query:  ETNRAPFDLSEAEAESVAGYNVEYA
        ETNRAPFDL EAEAESVAGYNVEY+
Subjt:  ETNRAPFDLSEAEAESVAGYNVEYA

ATMG01120.1 NADH dehydrogenase 1B2.4e-0692Show/hide
Query:  ETNRAPFDLSEAEAESVAGYNVEYA
        ETNRAPFDL EAEAESVAGYNVEY+
Subjt:  ETNRAPFDLSEAEAESVAGYNVEYA

ATMG01275.1 NADH dehydrogenase 1A2.4e-0692Show/hide
Query:  ETNRAPFDLSEAEAESVAGYNVEYA
        ETNRAPFDL EAEAESVAGYNVEY+
Subjt:  ETNRAPFDLSEAEAESVAGYNVEYA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACCGCTCAGAGGAATGCTCAAAATATCTTCGACGTTATGAGGGATGAAAACATATTTAATCAACTCACTATTCCAACCACCATTAGAGGAGAGAAGATCAGCCACTT
GTTTTTGGAAGAATTCATTCCTAATCACACATGGCTTAAGGTTACCAGAGTTAGGGATCTAAAGATCTTCTGCGATGTAAATGTGTCTGTCATTTCCAACACGCCATCTT
TAACCCTTAAAAAACAAATTTCTTCCCCAGAGTATGTGCTTATCCACATGCGCAAAGAAGTTTCCAACTACTCCATGGATTTTCTTCTTGAACTCTTTGAACACCAAATT
CCCTATTTCTGCAAATTTGGGAATGAAGACCAAGAAACTAATCGAGCTCCGTTTGATCTCTCAGAAGCGGAAGCTGAATCAGTTGCAGGCTATAATGTAGAATATGCGCG
GGATGCAATCCTTAATATTCGACTATTGGCAGAAGCCAATGTCCCGGGGCTCCAGCATCTTAAGTTGTTAAGCTTCCGTTGTTTTTTAAATTGTGTTTACATTAGAATTT
TTGGGGTTGAGAGTGGCTCATTTAAGTATCCA
mRNA sequenceShow/hide mRNA sequence
ATGACCGCTCAGAGGAATGCTCAAAATATCTTCGACGTTATGAGGGATGAAAACATATTTAATCAACTCACTATTCCAACCACCATTAGAGGAGAGAAGATCAGCCACTT
GTTTTTGGAAGAATTCATTCCTAATCACACATGGCTTAAGGTTACCAGAGTTAGGGATCTAAAGATCTTCTGCGATGTAAATGTGTCTGTCATTTCCAACACGCCATCTT
TAACCCTTAAAAAACAAATTTCTTCCCCAGAGTATGTGCTTATCCACATGCGCAAAGAAGTTTCCAACTACTCCATGGATTTTCTTCTTGAACTCTTTGAACACCAAATT
CCCTATTTCTGCAAATTTGGGAATGAAGACCAAGAAACTAATCGAGCTCCGTTTGATCTCTCAGAAGCGGAAGCTGAATCAGTTGCAGGCTATAATGTAGAATATGCGCG
GGATGCAATCCTTAATATTCGACTATTGGCAGAAGCCAATGTCCCGGGGCTCCAGCATCTTAAGTTGTTAAGCTTCCGTTGTTTTTTAAATTGTGTTTACATTAGAATTT
TTGGGGTTGAGAGTGGCTCATTTAAGTATCCA
Protein sequenceShow/hide protein sequence
MTAQRNAQNIFDVMRDENIFNQLTIPTTIRGEKISHLFLEEFIPNHTWLKVTRVRDLKIFCDVNVSVISNTPSLTLKKQISSPEYVLIHMRKEVSNYSMDFLLELFEHQI
PYFCKFGNEDQETNRAPFDLSEAEAESVAGYNVEYARDAILNIRLLAEANVPGLQHLKLLSFRCFLNCVYIRIFGVESGSFKYP