; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CcUC10G191900 (gene) of Watermelon (PI 537277) v1 genome

Gene IDCcUC10G191900
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionChlorophyll a-b binding protein, chloroplastic
Genome locationCicolChr10:8307989..8310017
RNA-Seq ExpressionCcUC10G191900
SyntenyCcUC10G191900
Gene Ontology termsGO:0009635 - response to herbicide (biological process)
GO:0009644 - response to high light intensity (biological process)
GO:0009737 - response to abscisic acid (biological process)
GO:0009768 - photosynthesis, light harvesting in photosystem I (biological process)
GO:0009769 - photosynthesis, light harvesting in photosystem II (biological process)
GO:0010119 - regulation of stomatal movement (biological process)
GO:0018298 - protein-chromophore linkage (biological process)
GO:0009517 - PSII associated light-harvesting complex II (cellular component)
GO:0009522 - photosystem I (cellular component)
GO:0009523 - photosystem II (cellular component)
GO:0016168 - chlorophyll binding (molecular function)
GO:0019904 - protein domain specific binding (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR001344 - Chlorophyll A-B binding protein, plant and chromista
IPR022796 - Chlorophyll A-B binding protein
IPR023329 - Chlorophyll a/b binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6577394.1 Chlorophyll a-b binding protein 3, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]1.2e-14696.95Show/hide
Query:  ATATSATLLRATPFLGQTRGSSQNSLRDVVAMGTGKYTMGNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWA
        ATATS  LLRATPFLGQTR S QN LRDVVAMGT KYTMGNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWA
Subjt:  ATATSATLLRATPFLGQTRGSSQNSLRDVVAMGTGKYTMGNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWA

Query:  MLGALGCITPEVLEKWLKVDFKEPVWFKAGAQIFTEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLADDP
        MLGA GCITPEVLEKWLKVDFKEPVWFKAGAQIF+EGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLADDP
Subjt:  MLGALGCITPEVLEKWLKVDFKEPVWFKAGAQIFTEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLADDP

Query:  VTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPGS
        VTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPGS
Subjt:  VTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPGS

XP_008452292.1 PREDICTED: chlorophyll a-b binding protein 13, chloroplastic [Cucumis melo]1.5e-14998.47Show/hide
Query:  ATATSATLLRATPFLGQTRGSSQNSLRDVVAMGTGKYTMGNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWA
        +TATSATLLRATPFLGQTRGS QN LRD VAMGTGKYTMGNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWA
Subjt:  ATATSATLLRATPFLGQTRGSSQNSLRDVVAMGTGKYTMGNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWA

Query:  MLGALGCITPEVLEKWLKVDFKEPVWFKAGAQIFTEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLADDP
        MLGALGCITPEVLEKWLKVDFKEPVWFKAGAQIFTEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLADDP
Subjt:  MLGALGCITPEVLEKWLKVDFKEPVWFKAGAQIFTEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLADDP

Query:  VTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPGS
        VTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPGS
Subjt:  VTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPGS

XP_022929511.1 chlorophyll a-b binding protein 13, chloroplastic [Cucurbita moschata]1.2e-14696.95Show/hide
Query:  ATATSATLLRATPFLGQTRGSSQNSLRDVVAMGTGKYTMGNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWA
        ATATS  LLRATPFLGQTR S QN LRDVVAMGT KYTMGNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWA
Subjt:  ATATSATLLRATPFLGQTRGSSQNSLRDVVAMGTGKYTMGNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWA

Query:  MLGALGCITPEVLEKWLKVDFKEPVWFKAGAQIFTEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLADDP
        MLGA GCITPEVLEKWLKVDFKEPVWFKAGAQIF+EGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLADDP
Subjt:  MLGALGCITPEVLEKWLKVDFKEPVWFKAGAQIFTEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLADDP

Query:  VTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPGS
        VTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPGS
Subjt:  VTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPGS

XP_022985252.1 chlorophyll a-b binding protein 13, chloroplastic [Cucurbita maxima]6.8e-14796.62Show/hide
Query:  MAATATATSATLLRATPFLGQTRGSSQNSLRDVVAMGTGKYTMGNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIH
        MAATATAT   LLRATPFLGQTR S QN LRDVVAMGT KYTMGNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIH
Subjt:  MAATATATSATLLRATPFLGQTRGSSQNSLRDVVAMGTGKYTMGNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIH

Query:  GRWAMLGALGCITPEVLEKWLKVDFKEPVWFKAGAQIFTEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGL
        GRWAMLGA GCITPEVLEKWLKVDFKEPVWFKAGAQIF+EGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGL
Subjt:  GRWAMLGALGCITPEVLEKWLKVDFKEPVWFKAGAQIFTEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGL

Query:  ADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPGS
        ADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPGS
Subjt:  ADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPGS

XP_023553506.1 chlorophyll a-b binding protein 3, chloroplastic [Cucurbita pepo subsp. pepo]8.0e-14896.62Show/hide
Query:  MAATATATSATLLRATPFLGQTRGSSQNSLRDVVAMGTGKYTMGNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIH
        MAATATA S  LLRATPFLGQTR S QN LRDVVAMGT KYTMGNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIH
Subjt:  MAATATATSATLLRATPFLGQTRGSSQNSLRDVVAMGTGKYTMGNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIH

Query:  GRWAMLGALGCITPEVLEKWLKVDFKEPVWFKAGAQIFTEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGL
        GRWAMLGA GCITPEVLEKWLKVDFKEPVWFKAGAQIF+EGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGL
Subjt:  GRWAMLGALGCITPEVLEKWLKVDFKEPVWFKAGAQIFTEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGL

Query:  ADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPGS
        ADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPGS
Subjt:  ADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPGS

TrEMBL top hitse value%identityAlignment
A0A0A0L6I8 Chlorophyll a-b binding protein, chloroplastic5.6e-14796.56Show/hide
Query:  ATATSATLLRATPFLGQTRGSSQNSLRDVVAMGTGKYTMGNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWA
        ATA +ATLLRATPFLGQ R S QN LRDVVAMGTGKYTM NDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWA
Subjt:  ATATSATLLRATPFLGQTRGSSQNSLRDVVAMGTGKYTMGNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWA

Query:  MLGALGCITPEVLEKWLKVDFKEPVWFKAGAQIFTEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLADDP
        MLGALGCITPEVLEKWLKVDFKEPVWFKAG+QIFTEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLADDP
Subjt:  MLGALGCITPEVLEKWLKVDFKEPVWFKAGAQIFTEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLADDP

Query:  VTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPGS
        VTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLD+PVANNAWVYATKFAPGS
Subjt:  VTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPGS

A0A1S3BUM8 Chlorophyll a-b binding protein, chloroplastic7.1e-15098.47Show/hide
Query:  ATATSATLLRATPFLGQTRGSSQNSLRDVVAMGTGKYTMGNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWA
        +TATSATLLRATPFLGQTRGS QN LRD VAMGTGKYTMGNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWA
Subjt:  ATATSATLLRATPFLGQTRGSSQNSLRDVVAMGTGKYTMGNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWA

Query:  MLGALGCITPEVLEKWLKVDFKEPVWFKAGAQIFTEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLADDP
        MLGALGCITPEVLEKWLKVDFKEPVWFKAGAQIFTEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLADDP
Subjt:  MLGALGCITPEVLEKWLKVDFKEPVWFKAGAQIFTEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLADDP

Query:  VTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPGS
        VTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPGS
Subjt:  VTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPGS

A0A5A7TY25 Chlorophyll a-b binding protein, chloroplastic7.1e-15098.47Show/hide
Query:  ATATSATLLRATPFLGQTRGSSQNSLRDVVAMGTGKYTMGNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWA
        +TATSATLLRATPFLGQTRGS QN LRD VAMGTGKYTMGNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWA
Subjt:  ATATSATLLRATPFLGQTRGSSQNSLRDVVAMGTGKYTMGNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWA

Query:  MLGALGCITPEVLEKWLKVDFKEPVWFKAGAQIFTEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLADDP
        MLGALGCITPEVLEKWLKVDFKEPVWFKAGAQIFTEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLADDP
Subjt:  MLGALGCITPEVLEKWLKVDFKEPVWFKAGAQIFTEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLADDP

Query:  VTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPGS
        VTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPGS
Subjt:  VTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPGS

A0A6J1ENC1 Chlorophyll a-b binding protein, chloroplastic5.6e-14796.95Show/hide
Query:  ATATSATLLRATPFLGQTRGSSQNSLRDVVAMGTGKYTMGNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWA
        ATATS  LLRATPFLGQTR S QN LRDVVAMGT KYTMGNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWA
Subjt:  ATATSATLLRATPFLGQTRGSSQNSLRDVVAMGTGKYTMGNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWA

Query:  MLGALGCITPEVLEKWLKVDFKEPVWFKAGAQIFTEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLADDP
        MLGA GCITPEVLEKWLKVDFKEPVWFKAGAQIF+EGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLADDP
Subjt:  MLGALGCITPEVLEKWLKVDFKEPVWFKAGAQIFTEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLADDP

Query:  VTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPGS
        VTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPGS
Subjt:  VTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPGS

A0A6J1J4D4 Chlorophyll a-b binding protein, chloroplastic3.3e-14796.62Show/hide
Query:  MAATATATSATLLRATPFLGQTRGSSQNSLRDVVAMGTGKYTMGNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIH
        MAATATAT   LLRATPFLGQTR S QN LRDVVAMGT KYTMGNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIH
Subjt:  MAATATATSATLLRATPFLGQTRGSSQNSLRDVVAMGTGKYTMGNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIH

Query:  GRWAMLGALGCITPEVLEKWLKVDFKEPVWFKAGAQIFTEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGL
        GRWAMLGA GCITPEVLEKWLKVDFKEPVWFKAGAQIF+EGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGL
Subjt:  GRWAMLGALGCITPEVLEKWLKVDFKEPVWFKAGAQIFTEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGL

Query:  ADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPGS
        ADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPGS
Subjt:  ADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPGS

SwissProt top hitse value%identityAlignment
P12328 Chlorophyll a-b binding protein of LHCII type I, chloroplastic3.8e-10069.06Show/hide
Query:  SATLLRATPFLGQTRGSSQNSLRDVVAMGTGKYTM-------GNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHG
        +A+ ++++ F GQT    ++ L   V +  G+++M          +WYG DR K+LGPFS QTPSYL GEFPGDYGWDTAGLSADPE FAKNR LEVIH 
Subjt:  SATLLRATPFLGQTRGSSQNSLRDVVAMGTGKYTM-------GNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHG

Query:  RWAMLGALGCITPEVLEKWLKVDFKEPVWFKAGAQIFTEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGND-LYPGGQYFDPLGL
        RWAMLGALGCI PE+L K   V F E VWFKAGAQIF+EGGLDYLGNPNLVHAQSILA+   QVVLMGL+EG+R+ G   +GEG D LYPGG  FDPLGL
Subjt:  RWAMLGALGCITPEVLEKWLKVDFKEPVWFKAGAQIFTEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGND-LYPGGQYFDPLGL

Query:  ADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPG
        ADDP  FAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP+ENL DH+ +PVANNAW +AT F PG
Subjt:  ADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPG

P14278 Chlorophyll a-b binding protein 4, chloroplastic5.9e-10170.61Show/hide
Query:  LRATPFLGQTRGSSQNS-LRDVVAMGTGKYTM-------GNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWA
        ++ + F+GQ  G SQN  +R V   G G+ TM          +WYG DR KYLGPFS QTPSYL GEFPGDYGWDTAGLSADPE FA+NR LEVIH RWA
Subjt:  LRATPFLGQTRGSSQNS-LRDVVAMGTGKYTM-------GNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWA

Query:  MLGALGCITPEVLEKWLKVDFKEPVWFKAGAQIFTEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGND-LYPGGQYFDPLGLADD
        MLGALGC+ PE+L K   V F E VWFKAG+QIF+EGGLDYLGNPNLVHAQSILA+   QVVLMG VEG+R+ G   +GEG D +YPGG  FDPLGLADD
Subjt:  MLGALGCITPEVLEKWLKVDFKEPVWFKAGAQIFTEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGND-LYPGGQYFDPLGLADD

Query:  PVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPG
        P  FAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP+ENL DH+++PVANNAW YAT F PG
Subjt:  PVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPG

P27489 Chlorophyll a-b binding protein 13, chloroplastic4.4e-14190.46Show/hide
Query:  ATATSATLLRATPFLGQTRGSSQNSLRDVVAMGTGKYTMGNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWA
        ATA+S T+++ATPFLGQT+ +  N LRDVVAMG+ ++TM NDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWA
Subjt:  ATATSATLLRATPFLGQTRGSSQNSLRDVVAMGTGKYTMGNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWA

Query:  MLGALGCITPEVLEKWLKVDFKEPVWFKAGAQIFTEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLADDP
        MLGALGCI PEVLEKW+KVDFKEPVWFKAG+QIF++GGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGL GVGEGNDLYPGGQYFDPLGLADDP
Subjt:  MLGALGCITPEVLEKWLKVDFKEPVWFKAGAQIFTEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLADDP

Query:  VTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPGS
         TFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKF PG+
Subjt:  VTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPGS

P27523 Chlorophyll a-b binding protein of LHCII type III, chloroplastic1.4e-13485.82Show/hide
Query:  MAAT-ATATSATLLRATPFL-GQTRGSSQNSLRDVVAMGTGKYTMGNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEV
        MA+T   A S  ++  TPFL GQ R +S + LRD+ A   G+ TMGNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFA+NRALEV
Subjt:  MAAT-ATATSATLLRATPFL-GQTRGSSQNSLRDVVAMGTGKYTMGNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEV

Query:  IHGRWAMLGALGCITPEVLEKWLKVDFKEPVWFKAGAQIFTEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPL
        IHGRWAMLGALGC+ PEVL+KW+ V+FKEPVWFKAG+QIF+EGGLDYLGNPNLVHAQSILAVLGFQV+LMGLVEGFRINGLDGVGEGNDLYPGGQYFDPL
Subjt:  IHGRWAMLGALGCITPEVLEKWLKVDFKEPVWFKAGAQIFTEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPL

Query:  GLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPGS
        GLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENL DHLD+PVANNAWV+ATKFAPGS
Subjt:  GLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPGS

Q9S7M0 Chlorophyll a-b binding protein 3, chloroplastic3.8e-14088.72Show/hide
Query:  MAATATATSATLLRATPFLGQTRGSSQNSLRDVVAMGTGKYTMGNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIH
        MA+T T +S+++L  T FLGQT+ SS N LRDVV++G+ KYTMGNDLWYGPDRVKYLGPFS QTPSYL GEFPGDYGWDTAGLSADPEAFAKNRALEVIH
Subjt:  MAATATATSATLLRATPFLGQTRGSSQNSLRDVVAMGTGKYTMGNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIH

Query:  GRWAMLGALGCITPEVLEKWLKVDFKEPVWFKAGAQIFTEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGL
        GRWAMLGA GCITPEVL+KW++VDFKEPVWFKAG+QIF+EGGLDYLGNPNLVHAQSILAVLGFQV+LMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGL
Subjt:  GRWAMLGALGCITPEVLEKWLKVDFKEPVWFKAGAQIFTEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGL

Query:  ADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPGS
        ADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAW +ATKFAPG+
Subjt:  ADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPGS

Arabidopsis top hitse value%identityAlignment
AT1G29930.1 chlorophyll A/B binding protein 19.0e-9765.41Show/hide
Query:  MAATATATSATLLRATPFLGQTRGSSQNSLRDVVAMGTGKYTMGNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIH
        MA ++ A +   ++ +P   +  GS + ++R  VA   G        WYG DRVKYLGPFS ++PSYL GEFPGDYGWDTAGLSADPE FA+NR LEVIH
Subjt:  MAATATATSATLLRATPFLGQTRGSSQNSLRDVVAMGTGKYTMGNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIH

Query:  GRWAMLGALGCITPEVLEKWLKVDFKEPVWFKAGAQIFTEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGND-LYPGGQYFDPLG
         RWAMLGALGC+ PE+L +   V F E VWFKAG+QIF++GGLDYLGNP+LVHAQSILA+   QV+LMG VEG+R+ G   +GE  D LYPGG  FDPLG
Subjt:  GRWAMLGALGCITPEVLEKWLKVDFKEPVWFKAGAQIFTEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGND-LYPGGQYFDPLG

Query:  LADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPG
        LA DP  FAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGP+ENL DHL +PV NNAW +AT F PG
Subjt:  LADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPG

AT2G05070.1 photosystem II light harvesting complex gene 2.29.6e-9968.28Show/hide
Query:  ATSATLLRATPFLGQTR-GSSQNSLRDVVAMGTGKYTM-------GNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEV
        ATSA  ++ + F GQT    S + ++ V  +G G+ TM          +WYGPDR KYLGPFS  TPSYL GE+PGDYGWDTAGLSADPE FAKNR LEV
Subjt:  ATSATLLRATPFLGQTR-GSSQNSLRDVVAMGTGKYTM-------GNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEV

Query:  IHGRWAMLGALGCITPEVLEKWLKVDFKEPVWFKAGAQIFTEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGND-LYPGGQYFDP
        IH RWAMLGALGC  PE+L K   V F E VWFKAG+QIF+EGGLDYLGNPNL+HAQSILA+   QVVLMG +EG+RI G   +GEG D LYPGG  FDP
Subjt:  IHGRWAMLGALGCITPEVLEKWLKVDFKEPVWFKAGAQIFTEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGND-LYPGGQYFDP

Query:  LGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPG
        L LA+DP  F+ELKVKE+KNGRLAMFSMFGFFVQAIVTGKGP+ENL DHL +PVANNAW YAT F PG
Subjt:  LGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPG

AT2G05100.1 photosystem II light harvesting complex gene 2.12.5e-9968.77Show/hide
Query:  ATSATLLRATPFLGQTRGSSQNS-LRDVVAMGTGKYTM-------GNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEV
        ATSA  ++ + F GQT     N  LR V   G G+ TM          +WYGPDR KYLGPFS  TPSYL GE+PGDYGWDTAGLSADPE FAKNR LEV
Subjt:  ATSATLLRATPFLGQTRGSSQNS-LRDVVAMGTGKYTM-------GNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEV

Query:  IHGRWAMLGALGCITPEVLEKWLKVDFKEPVWFKAGAQIFTEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGND-LYPGGQYFDP
        IH RWAMLGALGC  PE+L K   V F E VWFKAG+QIF+EGGLDYLGNPNL+HAQSILA+   QVVLMG +EG+RI G   +GEG D LYPGG  FDP
Subjt:  IHGRWAMLGALGCITPEVLEKWLKVDFKEPVWFKAGAQIFTEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGND-LYPGGQYFDP

Query:  LGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPGS
        L LA+DP  F+ELKVKE+KNGRLAMFSMFGFFVQAIVTGKGP+ENL DHL +PVANNAW YAT F PG+
Subjt:  LGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPGS

AT3G27690.1 photosystem II light harvesting complex gene 2.33.1e-9767.29Show/hide
Query:  ATSATLLRATPFLGQTRGSSQNSLRDVV--AMGTGKYTM-------GNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALE
        ATSA  ++ + F GQT     N L   +  + G G+  M          +WYGPDR KYLGPFS  TPSYL GE+PGDYGWDTAGLSADPE FAKNR LE
Subjt:  ATSATLLRATPFLGQTRGSSQNSLRDVV--AMGTGKYTM-------GNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALE

Query:  VIHGRWAMLGALGCITPEVLEKWLKVDFKEPVWFKAGAQIFTEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGND-LYPGGQYFD
        VIH RWAMLGALGC  PE+L K   V F E VWFKAG+QIF+EGGLDYLGNPNL+HAQSILA+   QVVLMG +EG+RI G   +GEG D LYPGG  FD
Subjt:  VIHGRWAMLGALGCITPEVLEKWLKVDFKEPVWFKAGAQIFTEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGND-LYPGGQYFD

Query:  PLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPG
        PL LA+DP  F+ELKVKE+KNGRLAMFSMFGFFVQAIVTGKGP+ENL DH+ +PVANNAW YAT F PG
Subjt:  PLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPG

AT5G54270.1 light-harvesting chlorophyll B-binding protein 32.7e-14188.72Show/hide
Query:  MAATATATSATLLRATPFLGQTRGSSQNSLRDVVAMGTGKYTMGNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIH
        MA+T T +S+++L  T FLGQT+ SS N LRDVV++G+ KYTMGNDLWYGPDRVKYLGPFS QTPSYL GEFPGDYGWDTAGLSADPEAFAKNRALEVIH
Subjt:  MAATATATSATLLRATPFLGQTRGSSQNSLRDVVAMGTGKYTMGNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIH

Query:  GRWAMLGALGCITPEVLEKWLKVDFKEPVWFKAGAQIFTEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGL
        GRWAMLGA GCITPEVL+KW++VDFKEPVWFKAG+QIF+EGGLDYLGNPNLVHAQSILAVLGFQV+LMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGL
Subjt:  GRWAMLGALGCITPEVLEKWLKVDFKEPVWFKAGAQIFTEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGL

Query:  ADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPGS
        ADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAW +ATKFAPG+
Subjt:  ADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPGS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCGCCACCGCCACCGCCACCTCCGCCACCCTCCTCCGGGCTACTCCCTTTCTTGGCCAGACCAGAGGCTCTTCCCAGAACTCCCTCAGAGATGTCGTCGCCATGGG
AACTGGCAAATACACCATGGGAAATGATCTGTGGTATGGACCAGACCGAGTGAAGTACTTGGGGCCGTTTTCAGCTCAGACTCCATCCTACTTGAACGGTGAATTCCCCG
GCGATTATGGATGGGACACTGCTGGCTTGTCCGCCGATCCCGAGGCCTTCGCCAAGAACAGAGCTCTCGAGGTGATCCACGGGAGGTGGGCCATGTTGGGAGCATTGGGT
TGCATAACACCCGAAGTGCTAGAAAAATGGCTTAAAGTGGACTTCAAGGAGCCAGTGTGGTTCAAGGCAGGGGCCCAAATCTTCACAGAAGGTGGCCTAGACTACCTAGG
CAACCCCAACCTGGTCCACGCCCAGAGCATCCTAGCCGTCTTGGGGTTCCAAGTGGTCCTAATGGGTCTTGTCGAAGGCTTCCGCATCAACGGCCTCGACGGTGTCGGCG
AGGGCAACGACCTCTACCCGGGCGGTCAGTACTTTGACCCTCTCGGACTGGCCGATGACCCAGTCACCTTCGCGGAGCTGAAGGTCAAGGAGATCAAGAATGGCCGTCTT
GCCATGTTTTCCATGTTTGGGTTCTTTGTTCAGGCCATTGTCACTGGAAAGGGCCCTCTTGAGAACCTTCTTGACCATCTTGATAACCCTGTGGCTAACAATGCCTGGGT
TTATGCTACCAAGTTTGCCCCTGGCTCATAA
mRNA sequenceShow/hide mRNA sequence
CTTCCTCGTTTCCCCATAATATTCCCCCACTTTCCCTTCTCTATCACACAATTGCAACAGCAGTGGCCCTTCCTCAGTCCTTTCTCACAAACTCAAACACAGAGCCTCAA
CTAGCAATGGCCGCCACCGCCACCGCCACCTCCGCCACCCTCCTCCGGGCTACTCCCTTTCTTGGCCAGACCAGAGGCTCTTCCCAGAACTCCCTCAGAGATGTCGTCGC
CATGGGAACTGGCAAATACACCATGGGAAATGATCTGTGGTATGGACCAGACCGAGTGAAGTACTTGGGGCCGTTTTCAGCTCAGACTCCATCCTACTTGAACGGTGAAT
TCCCCGGCGATTATGGATGGGACACTGCTGGCTTGTCCGCCGATCCCGAGGCCTTCGCCAAGAACAGAGCTCTCGAGGTGATCCACGGGAGGTGGGCCATGTTGGGAGCA
TTGGGTTGCATAACACCCGAAGTGCTAGAAAAATGGCTTAAAGTGGACTTCAAGGAGCCAGTGTGGTTCAAGGCAGGGGCCCAAATCTTCACAGAAGGTGGCCTAGACTA
CCTAGGCAACCCCAACCTGGTCCACGCCCAGAGCATCCTAGCCGTCTTGGGGTTCCAAGTGGTCCTAATGGGTCTTGTCGAAGGCTTCCGCATCAACGGCCTCGACGGTG
TCGGCGAGGGCAACGACCTCTACCCGGGCGGTCAGTACTTTGACCCTCTCGGACTGGCCGATGACCCAGTCACCTTCGCGGAGCTGAAGGTCAAGGAGATCAAGAATGGC
CGTCTTGCCATGTTTTCCATGTTTGGGTTCTTTGTTCAGGCCATTGTCACTGGAAAGGGCCCTCTTGAGAACCTTCTTGACCATCTTGATAACCCTGTGGCTAACAATGC
CTGGGTTTATGCTACCAAGTTTGCCCCTGGCTCATAAGTATATTACATTAATCATGGAAATTCAACAAGTGATCTGTTGTGTAAATTGTTGGTAGCTTTCTGTTTTTTTG
GGTGTGGGTTGGTGTGATTATAATTAGATGGTTGAGTATTGAGGTGGATCAATGGACATTAATTCCCACTTGATCTGATGGATAATGTTCTTAATCTTAATTACATCATT
TGATTTACTTTAAG
Protein sequenceShow/hide protein sequence
MAATATATSATLLRATPFLGQTRGSSQNSLRDVVAMGTGKYTMGNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALG
CITPEVLEKWLKVDFKEPVWFKAGAQIFTEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLADDPVTFAELKVKEIKNGRL
AMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPGS