; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CcUC10G192270 (gene) of Watermelon (PI 537277) v1 genome

Gene IDCcUC10G192270
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionRING-type domain-containing protein
Genome locationCicolChr10:9155300..9155869
RNA-Seq ExpressionCcUC10G192270
SyntenyCcUC10G192270
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR001841 - Zinc finger, RING-type
IPR013083 - Zinc finger, RING/FYVE/PHD-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ADN33914.1 hypothetical protein [Cucumis melo subsp. melo]3.7e-6283.54Show/hide
Query:  MIPQALSVPQSNPPPSILPFLTAFSIIIVVFISIIIFSVVVSFAIIIFIYIICQYLIGPTNLDGHGSDLEVGERNENQRMITRSRILVSHHQISTQGRD-
        MIPQAL+VPQSNPPPSILPFLTAFSI+IV+FISIIIFSVV SFAIIIFIYIIC+YLIG T+LD H SDLE GE NENQRMI RSRIL++HHQ S+ GRD 
Subjt:  MIPQALSVPQSNPPPSILPFLTAFSIIIVVFISIIIFSVVVSFAIIIFIYIICQYLIGPTNLDGHGSDLEVGERNENQRMITRSRILVSHHQISTQGRD-

Query:  MERSESNAWREALERTIMVEKVAEPVSYGSSEAVAKCIDCAICLEDFENGELCQIFPV
        MERSESN WRE +ERTIM+EKVA PVSYGSSE VAKCIDCAICLEDFENGELCQ FP+
Subjt:  MERSESNAWREALERTIMVEKVAEPVSYGSSEAVAKCIDCAICLEDFENGELCQIFPV

KAA0060638.1 putative RING-H2 finger protein ATL19 [Cucumis melo var. makuwa]5.3e-8586.32Show/hide
Query:  MIPQALSVPQSNPPPSILPFLTAFSIIIVVFISIIIFSVVVSFAIIIFIYIICQYLIGPTNLDGHGSDLEVGERNENQRMITRSRILVSHHQISTQGRD-
        MIPQAL+VPQSNPPPSILPFLTAFSI+IV+FISIIIFSVV SFAIIIFIYIIC+YLIG T+LD H SDLE GE NENQRMI RSRIL++HHQ S+ GRD 
Subjt:  MIPQALSVPQSNPPPSILPFLTAFSIIIVVFISIIIFSVVVSFAIIIFIYIICQYLIGPTNLDGHGSDLEVGERNENQRMITRSRILVSHHQISTQGRD-

Query:  MERSESNAWREALERTIMVEKVAEPVSYGSSEAVAKCIDCAICLEDFENGELCQIFPVCNHIFHYSCIQHWLKKNMTCPICRCSIVNEKC
        MERSESN WRE +ERTIM+EKVA PVSYGSSE VAKCIDCAICLEDFENGELCQ FPVCNHIFHYSCIQHWLKKNMTCPICRCSIVN+KC
Subjt:  MERSESNAWREALERTIMVEKVAEPVSYGSSEAVAKCIDCAICLEDFENGELCQIFPVCNHIFHYSCIQHWLKKNMTCPICRCSIVNEKC

KAG6600727.1 putative RING-H2 finger protein ATL19, partial [Cucurbita argyrosperma subsp. sororia]6.7e-5663.78Show/hide
Query:  MIPQAL-SVPQSNPPPSILPFLTAFSIIIVVFISIIIFSVVVSFAIIIFIYIICQYLIGPTNLDGHGSDLEVGERNENQRMITRSRILVSHHQISTQGRD
        MIPQAL +VPQSNPPPS LPFLTAFSI+IV+ ISI+IFS++ SF+IIIFI+++CQYLIG TNLDGH  D+E GERN+NQ    R R LVS          
Subjt:  MIPQAL-SVPQSNPPPSILPFLTAFSIIIVVFISIIIFSVVVSFAIIIFIYIICQYLIGPTNLDGHGSDLEVGERNENQRMITRSRILVSHHQISTQGRD

Query:  MERSESNAWREALERTI---------MVEKVAEPVSYGSSEAVAKCIDCAICLEDFENGELCQIFPVCNHIFHYSCIQHWLKKNMTCPICRCSIVN
          R ESN WREALERT+         +V K+A  V YG SE  AK  DCAICLE+FENGE CQIF VC HIFHYSCIQ WL++NMTCPICR  I N
Subjt:  MERSESNAWREALERTI---------MVEKVAEPVSYGSSEAVAKCIDCAICLEDFENGELCQIFPVCNHIFHYSCIQHWLKKNMTCPICRCSIVN

TYK02232.1 putative RING-H2 finger protein ATL19 [Cucumis melo var. makuwa]1.6e-6284.18Show/hide
Query:  MIPQALSVPQSNPPPSILPFLTAFSIIIVVFISIIIFSVVVSFAIIIFIYIICQYLIGPTNLDGHGSDLEVGERNENQRMITRSRILVSHHQISTQGRD-
        MIPQAL+VPQSNPPPSILPFLTAFSI+IV+FISIIIFSVV SFAIIIFIYIIC+YLIG T+LD H SDLE GE NENQRMI RSRIL++HHQ S+ GRD 
Subjt:  MIPQALSVPQSNPPPSILPFLTAFSIIIVVFISIIIFSVVVSFAIIIFIYIICQYLIGPTNLDGHGSDLEVGERNENQRMITRSRILVSHHQISTQGRD-

Query:  MERSESNAWREALERTIMVEKVAEPVSYGSSEAVAKCIDCAICLEDFENGELCQIFPV
        MERSESN WRE +ERTIM+EKVA PVSYGSSE VAKCIDCAICLEDFENGELCQ FPV
Subjt:  MERSESNAWREALERTIMVEKVAEPVSYGSSEAVAKCIDCAICLEDFENGELCQIFPV

XP_011652743.1 uncharacterized protein LOC105435076 [Cucumis sativus]8.2e-6253.73Show/hide
Query:  MIPQALSVPQSNPPPSILPFLTAFSIIIVVFISIIIFSVVVSFAIIIFIYIICQYLIGPTNLDGHGSDLEVGERNENQRMITRSRILVSHHQISTQGRD-
        MIPQAL+VPQSNPPPSILPFLTAFSI+IV+FI+IIIFSVV SFAII+ IY+IC+YLIG T+LDGH S+LE GE NENQ MITRSRIL++HHQ S+ GRD 
Subjt:  MIPQALSVPQSNPPPSILPFLTAFSIIIVVFISIIIFSVVVSFAIIIFIYIICQYLIGPTNLDGHGSDLEVGERNENQRMITRSRILVSHHQISTQGRD-

Query:  MERSESNAWREALERTIMVEKVAEPVSYGSSEAVAKCIDCAICLEDFENGELCQ----------------------------------------------
        MERSESNAWRE +ERTIM+EKVA PVSYGSSEA  KCIDCAICLEDFENGELCQ                                              
Subjt:  MERSESNAWREALERTIMVEKVAEPVSYGSSEAVAKCIDCAICLEDFENGELCQ----------------------------------------------

Query:  -------------------------------------IFPVCNHIFHYSCIQHWLKKNMTCPICRCSI
                                             +FP C HIFH  CI +WL+ N TCPICR  +
Subjt:  -------------------------------------IFPVCNHIFHYSCIQHWLKKNMTCPICRCSI

TrEMBL top hitse value%identityAlignment
A0A0A0L6M6 RING-type domain-containing protein1.5e-8284.04Show/hide
Query:  MIPQALSVPQSNPPPSILPFLTAFSIIIVVFISIIIFSVVVSFAIIIFIYIICQYLIGPTNLDGHGSDLEVGERNENQRMITRSRILVSHHQISTQGRD-
        MIPQAL+VPQSNPPPSILPFLTAFSI+IV+FI+IIIFSVV SFAII+ IY+IC+YLIG T+LDGH S+LE GE NENQ MITRSRIL++HHQ S+ GRD 
Subjt:  MIPQALSVPQSNPPPSILPFLTAFSIIIVVFISIIIFSVVVSFAIIIFIYIICQYLIGPTNLDGHGSDLEVGERNENQRMITRSRILVSHHQISTQGRD-

Query:  MERSESNAWREALERTIMVEKVAEPVSYGSSEAVAKCIDCAICLEDFENGELCQIFPVCNHIFHYSCIQHWLKKNMTCPICRCSIVNE
        MERSESNAWRE +ERTIM+EKVA PVSYGSSEA  KCIDCAICLEDFENGELCQ FPVCNHIFHYSCIQHWLKKNMTCPICRCSIVN+
Subjt:  MERSESNAWREALERTIMVEKVAEPVSYGSSEAVAKCIDCAICLEDFENGELCQIFPVCNHIFHYSCIQHWLKKNMTCPICRCSIVNE

A0A5A7UZF7 Putative RING-H2 finger protein ATL192.5e-8586.32Show/hide
Query:  MIPQALSVPQSNPPPSILPFLTAFSIIIVVFISIIIFSVVVSFAIIIFIYIICQYLIGPTNLDGHGSDLEVGERNENQRMITRSRILVSHHQISTQGRD-
        MIPQAL+VPQSNPPPSILPFLTAFSI+IV+FISIIIFSVV SFAIIIFIYIIC+YLIG T+LD H SDLE GE NENQRMI RSRIL++HHQ S+ GRD 
Subjt:  MIPQALSVPQSNPPPSILPFLTAFSIIIVVFISIIIFSVVVSFAIIIFIYIICQYLIGPTNLDGHGSDLEVGERNENQRMITRSRILVSHHQISTQGRD-

Query:  MERSESNAWREALERTIMVEKVAEPVSYGSSEAVAKCIDCAICLEDFENGELCQIFPVCNHIFHYSCIQHWLKKNMTCPICRCSIVNEKC
        MERSESN WRE +ERTIM+EKVA PVSYGSSE VAKCIDCAICLEDFENGELCQ FPVCNHIFHYSCIQHWLKKNMTCPICRCSIVN+KC
Subjt:  MERSESNAWREALERTIMVEKVAEPVSYGSSEAVAKCIDCAICLEDFENGELCQIFPVCNHIFHYSCIQHWLKKNMTCPICRCSIVNEKC

A0A5D3BTV2 Putative RING-H2 finger protein ATL198.0e-6384.18Show/hide
Query:  MIPQALSVPQSNPPPSILPFLTAFSIIIVVFISIIIFSVVVSFAIIIFIYIICQYLIGPTNLDGHGSDLEVGERNENQRMITRSRILVSHHQISTQGRD-
        MIPQAL+VPQSNPPPSILPFLTAFSI+IV+FISIIIFSVV SFAIIIFIYIIC+YLIG T+LD H SDLE GE NENQRMI RSRIL++HHQ S+ GRD 
Subjt:  MIPQALSVPQSNPPPSILPFLTAFSIIIVVFISIIIFSVVVSFAIIIFIYIICQYLIGPTNLDGHGSDLEVGERNENQRMITRSRILVSHHQISTQGRD-

Query:  MERSESNAWREALERTIMVEKVAEPVSYGSSEAVAKCIDCAICLEDFENGELCQIFPV
        MERSESN WRE +ERTIM+EKVA PVSYGSSE VAKCIDCAICLEDFENGELCQ FPV
Subjt:  MERSESNAWREALERTIMVEKVAEPVSYGSSEAVAKCIDCAICLEDFENGELCQIFPV

A0A7N2L6L4 RING-type domain-containing protein1.8e-2239.06Show/hide
Query:  MIPQALSVPQSNPPP--SILPFLTAFSIIIVVFISIIIFSVVVSFAIIIFIYIICQYLIGPTNLDGHGSDLEVGERNENQ-RMITRSRILVSHHQISTQG
        M+PQA   P   PPP   IL F+    I I+ ++ II+ SVVV   I++ I  IC     P+N +    DLE GER  +Q   I  S   + + +I    
Subjt:  MIPQALSVPQSNPPP--SILPFLTAFSIIIVVFISIIIFSVVVSFAIIIFIYIICQYLIGPTNLDGHGSDLEVGERNENQ-RMITRSRILVSHHQISTQG

Query:  RDMERSESNAWREALERTIMVEKVAEPVSYGSSEAVAKCIDCAICLEDFENGELCQIFPVCNHIFHYSCIQHWLKKNMTCPICRCSIVNEKC
        + +  +     +   E+   +EK+   V+YGS E  + C  C ICLEDF+NG+ CQ+FP CNH+FH +CI +WLKK+ TCPICR  ++ + C
Subjt:  RDMERSESNAWREALERTIMVEKVAEPVSYGSSEAVAKCIDCAICLEDFENGELCQIFPVCNHIFHYSCIQHWLKKNMTCPICRCSIVNEKC

E5GBS2 Uncharacterized protein1.8e-6283.54Show/hide
Query:  MIPQALSVPQSNPPPSILPFLTAFSIIIVVFISIIIFSVVVSFAIIIFIYIICQYLIGPTNLDGHGSDLEVGERNENQRMITRSRILVSHHQISTQGRD-
        MIPQAL+VPQSNPPPSILPFLTAFSI+IV+FISIIIFSVV SFAIIIFIYIIC+YLIG T+LD H SDLE GE NENQRMI RSRIL++HHQ S+ GRD 
Subjt:  MIPQALSVPQSNPPPSILPFLTAFSIIIVVFISIIIFSVVVSFAIIIFIYIICQYLIGPTNLDGHGSDLEVGERNENQRMITRSRILVSHHQISTQGRD-

Query:  MERSESNAWREALERTIMVEKVAEPVSYGSSEAVAKCIDCAICLEDFENGELCQIFPV
        MERSESN WRE +ERTIM+EKVA PVSYGSSE VAKCIDCAICLEDFENGELCQ FP+
Subjt:  MERSESNAWREALERTIMVEKVAEPVSYGSSEAVAKCIDCAICLEDFENGELCQIFPV

SwissProt top hitse value%identityAlignment
Q8W571 RING-H2 finger protein ATL322.6e-1042.37Show/hide
Query:  SYGSSEAVAKCIDCAICLEDFENGELCQIFPVCNHIFHYSCIQHWLKKNMTCPICRCSI
        S   S+  +K ++CAICL + E+ E  ++ P+CNH+FH  CI  WL  + TCP+CR ++
Subjt:  SYGSSEAVAKCIDCAICLEDFENGELCQIFPVCNHIFHYSCIQHWLKKNMTCPICRCSI

Q9C919 Putative RING-H2 finger protein ATL193.1e-1129.78Show/hide
Query:  SNPPPSILPFLTAFSIIIVVFISIIIFSVVVSFAIIIFIYIICQYLIGP---TNLDGHGSDLEVGERNENQRMITRSRILVSHHQISTQGR--DMER-SE
        S+     +  ++   + + + + I++  ++ + A+I+ IY+I   ++ P   T LD    DLE+G +   Q    R+RI+  H  IST  R  D ER  +
Subjt:  SNPPPSILPFLTAFSIIIVVFISIIIFSVVVSFAIIIFIYIICQYLIGP---TNLDGHGSDLEVGERNENQRMITRSRILVSHHQISTQGR--DMER-SE

Query:  SNAWREALERTIMVEKVAEPVSYGSSEAVA-KCIDCAICLEDFENGELCQIFPVCNHIFHYSCIQHWLKKNMTCPICR
            ++++  T++ + +    ++   E  + +  +CAICL  +   E C++FPVC HI+H  CI  WLK ++TCP CR
Subjt:  SNAWREALERTIMVEKVAEPVSYGSSEAVA-KCIDCAICLEDFENGELCQIFPVCNHIFHYSCIQHWLKKNMTCPICR

Q9LZV8 RING-H2 finger protein ATL745.2e-1147.46Show/hide
Query:  YGSSEAVAKCIDCAICLEDFENGELCQIFPVCNHIFHYSCIQHWLKKNMTCPICRCSIV
        YGS E      +CAICL +F +GE  ++ P CNH FH SCI  WL  + +CP CR S++
Subjt:  YGSSEAVAKCIDCAICLEDFENGELCQIFPVCNHIFHYSCIQHWLKKNMTCPICRCSIV

Q9SG96 RING-H2 finger protein ATL721.5e-1046.77Show/hide
Query:  YGSSEAVAKCIDCAICLEDFENGELCQIFPVCNHIFHYSCIQHWLKKNMTCPICRCSIVNEK
        YGS     K  +C ICL DFE+GE  ++ P CNH FH  CI  WL    +CP CR S++ E+
Subjt:  YGSSEAVAKCIDCAICLEDFENGELCQIFPVCNHIFHYSCIQHWLKKNMTCPICRCSIVNEK

Q9SJJ7 RING-H2 finger protein ATL573.4e-1044.83Show/hide
Query:  PVSYGSSEAVAKCIDCAICLEDFENGELCQIFPVCNHIFHYSCIQHWLKKNMTCPICR
        PV   +  A  +  DC ICL DFE GE  ++ P C H+FH  C+  WL   +TCP+CR
Subjt:  PVSYGSSEAVAKCIDCAICLEDFENGELCQIFPVCNHIFHYSCIQHWLKKNMTCPICR

Arabidopsis top hitse value%identityAlignment
AT1G53010.1 RING/U-box superfamily protein2.2e-1229.78Show/hide
Query:  SNPPPSILPFLTAFSIIIVVFISIIIFSVVVSFAIIIFIYIICQYLIGP---TNLDGHGSDLEVGERNENQRMITRSRILVSHHQISTQGR--DMER-SE
        S+     +  ++   + + + + I++  ++ + A+I+ IY+I   ++ P   T LD    DLE+G +   Q    R+RI+  H  IST  R  D ER  +
Subjt:  SNPPPSILPFLTAFSIIIVVFISIIIFSVVVSFAIIIFIYIICQYLIGP---TNLDGHGSDLEVGERNENQRMITRSRILVSHHQISTQGR--DMER-SE

Query:  SNAWREALERTIMVEKVAEPVSYGSSEAVA-KCIDCAICLEDFENGELCQIFPVCNHIFHYSCIQHWLKKNMTCPICR
            ++++  T++ + +    ++   E  + +  +CAICL  +   E C++FPVC HI+H  CI  WLK ++TCP CR
Subjt:  SNAWREALERTIMVEKVAEPVSYGSSEAVA-KCIDCAICLEDFENGELCQIFPVCNHIFHYSCIQHWLKKNMTCPICR

AT2G27940.1 RING/U-box superfamily protein2.4e-1144.83Show/hide
Query:  PVSYGSSEAVAKCIDCAICLEDFENGELCQIFPVCNHIFHYSCIQHWLKKNMTCPICR
        PV   +  A  +  DC ICL DFE GE  ++ P C H+FH  C+  WL   +TCP+CR
Subjt:  PVSYGSSEAVAKCIDCAICLEDFENGELCQIFPVCNHIFHYSCIQHWLKKNMTCPICR

AT3G10910.1 RING/U-box superfamily protein1.1e-1146.77Show/hide
Query:  YGSSEAVAKCIDCAICLEDFENGELCQIFPVCNHIFHYSCIQHWLKKNMTCPICRCSIVNEK
        YGS     K  +C ICL DFE+GE  ++ P CNH FH  CI  WL    +CP CR S++ E+
Subjt:  YGSSEAVAKCIDCAICLEDFENGELCQIFPVCNHIFHYSCIQHWLKKNMTCPICRCSIVNEK

AT4G40070.1 RING/U-box superfamily protein1.8e-1142.37Show/hide
Query:  SYGSSEAVAKCIDCAICLEDFENGELCQIFPVCNHIFHYSCIQHWLKKNMTCPICRCSI
        S   S+  +K ++CAICL + E+ E  ++ P+CNH+FH  CI  WL  + TCP+CR ++
Subjt:  SYGSSEAVAKCIDCAICLEDFENGELCQIFPVCNHIFHYSCIQHWLKKNMTCPICRCSI

AT5G01880.1 RING/U-box superfamily protein3.7e-1247.46Show/hide
Query:  YGSSEAVAKCIDCAICLEDFENGELCQIFPVCNHIFHYSCIQHWLKKNMTCPICRCSIV
        YGS E      +CAICL +F +GE  ++ P CNH FH SCI  WL  + +CP CR S++
Subjt:  YGSSEAVAKCIDCAICLEDFENGELCQIFPVCNHIFHYSCIQHWLKKNMTCPICRCSIV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATCCCTCAAGCTCTTAGTGTTCCACAATCCAACCCTCCTCCTTCAATCCTCCCTTTCCTCACTGCGTTTTCGATCATAATCGTTGTCTTCATCTCCATCATCATCTT
CTCCGTCGTCGTGTCCTTTGCAATCATCATCTTCATCTATATCATTTGCCAATACCTAATTGGGCCAACGAATTTAGACGGACATGGTTCCGACCTCGAAGTGGGTGAGA
GAAACGAAAACCAAAGGATGATCACACGGAGTAGGATTTTGGTATCTCATCATCAAATAAGCACTCAAGGGAGAGACATGGAGAGGTCTGAAAGCAACGCATGGAGGGAG
GCTTTGGAGAGAACAATAATGGTAGAGAAAGTGGCGGAGCCGGTGAGCTATGGGAGCTCCGAGGCGGTAGCGAAATGCATTGATTGTGCAATCTGTTTGGAGGATTTTGA
AAATGGAGAGCTTTGTCAGATTTTTCCAGTGTGTAATCACATTTTTCATTATTCTTGTATTCAACATTGGTTGAAAAAGAACATGACTTGTCCAATTTGTCGTTGTTCTA
TTGTCAATGAGAAGTGCTGA
mRNA sequenceShow/hide mRNA sequence
ATGATCCCTCAAGCTCTTAGTGTTCCACAATCCAACCCTCCTCCTTCAATCCTCCCTTTCCTCACTGCGTTTTCGATCATAATCGTTGTCTTCATCTCCATCATCATCTT
CTCCGTCGTCGTGTCCTTTGCAATCATCATCTTCATCTATATCATTTGCCAATACCTAATTGGGCCAACGAATTTAGACGGACATGGTTCCGACCTCGAAGTGGGTGAGA
GAAACGAAAACCAAAGGATGATCACACGGAGTAGGATTTTGGTATCTCATCATCAAATAAGCACTCAAGGGAGAGACATGGAGAGGTCTGAAAGCAACGCATGGAGGGAG
GCTTTGGAGAGAACAATAATGGTAGAGAAAGTGGCGGAGCCGGTGAGCTATGGGAGCTCCGAGGCGGTAGCGAAATGCATTGATTGTGCAATCTGTTTGGAGGATTTTGA
AAATGGAGAGCTTTGTCAGATTTTTCCAGTGTGTAATCACATTTTTCATTATTCTTGTATTCAACATTGGTTGAAAAAGAACATGACTTGTCCAATTTGTCGTTGTTCTA
TTGTCAATGAGAAGTGCTGA
Protein sequenceShow/hide protein sequence
MIPQALSVPQSNPPPSILPFLTAFSIIIVVFISIIIFSVVVSFAIIIFIYIICQYLIGPTNLDGHGSDLEVGERNENQRMITRSRILVSHHQISTQGRDMERSESNAWRE
ALERTIMVEKVAEPVSYGSSEAVAKCIDCAICLEDFENGELCQIFPVCNHIFHYSCIQHWLKKNMTCPICRCSIVNEKC