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CcUC10G192540 (gene) of Watermelon (PI 537277) v1 genome

Gene IDCcUC10G192540
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionThioredoxin
Genome locationCicolChr10:9681429..9720908
RNA-Seq ExpressionCcUC10G192540
SyntenyCcUC10G192540
Gene Ontology termsNA
InterPro domainsIPR013766 - Thioredoxin domain
IPR036249 - Thioredoxin-like superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7029409.1 Thioredoxin H5, partial [Cucurbita argyrosperma subsp. argyrosperma]5.8e-1753.54Show/hide
Query:  LREHRILLEPMAEEMQVIEIRNPEEFDSQVKRGDDALKLIVSNFTASQCPPCRFIAPIFIQLAKKSPNA------------IAERLNVTAMPTFVFLKG
        L++   L EPMA E QVI +R  +EFD+ VK+G +A KLIV +FTAS CPPCRFIAP+F ++AK   N             IA++  VTAMPTFVFLKG
Subjt:  LREHRILLEPMAEEMQVIEIRNPEEFDSQVKRGDDALKLIVSNFTASQCPPCRFIAPIFIQLAKKSPNA------------IAERLNVTAMPTFVFLKG

XP_004152672.3 thioredoxin H1 [Cucumis sativus]5.8e-1758.89Show/hide
Query:  MAEEMQVIEIRNPEEFDSQVKRGDDALKLIVSNFTASQCPPCRFIAPIFIQLAKKSPN------------AIAERLNVTAMPTFVFLKGE
        MAEE QVI I N +EFD QV+ G +A KLIV +FTAS CPPCRFIAPIF +LAKK+P+            AIA R NV AMPTF F++ E
Subjt:  MAEEMQVIEIRNPEEFDSQVKRGDDALKLIVSNFTASQCPPCRFIAPIFIQLAKKSPN------------AIAERLNVTAMPTFVFLKGE

XP_022997319.1 thioredoxin H5-like [Cucurbita maxima]5.8e-1752.53Show/hide
Query:  LREHRILLEPMAEEMQVIEIRNPEEFDSQVKRGDDALKLIVSNFTASQCPPCRFIAPIFIQLAKKSPNA------------IAERLNVTAMPTFVFLKG
        L++   L EPMA E Q I +R  +EFD+ VK+G +A KLIV +FTAS CPPCRFIAP+F ++AK   N             IA++  VTAMPTFVFLKG
Subjt:  LREHRILLEPMAEEMQVIEIRNPEEFDSQVKRGDDALKLIVSNFTASQCPPCRFIAPIFIQLAKKSPNA------------IAERLNVTAMPTFVFLKG

XP_023545550.1 thioredoxin H5-like [Cucurbita pepo subsp. pepo]1.9e-1556.18Show/hide
Query:  MAEEMQVIEIRNPEEFDSQVKRGDDALKLIVSNFTASQCPPCRFIAPIFIQLAKKSPNA------------IAERLNVTAMPTFVFLKG
        MA E QVI +R  EEFD+ VK+G +A KLIV +FTAS CPPCRFIAP+F ++AK   N             IA++ +VTAMPTFVFLKG
Subjt:  MAEEMQVIEIRNPEEFDSQVKRGDDALKLIVSNFTASQCPPCRFIAPIFIQLAKKSPNA------------IAERLNVTAMPTFVFLKG

XP_038884374.1 thioredoxin H-type-like [Benincasa hispida]1.1e-1558.89Show/hide
Query:  MAEEMQVIEIRNPEEFDSQVKRGDDALKLIVSNFTASQCPPCRFIAPIFIQLAKKSPNA------------IAERLNVTAMPTFVFLKGE
        MAEE QVI I   EEFD+ VK G++A KLIV +FTAS CPPCRFIAPIF +LAK + N             IAE+  V AMPTFVFLK E
Subjt:  MAEEMQVIEIRNPEEFDSQVKRGDDALKLIVSNFTASQCPPCRFIAPIFIQLAKKSPNA------------IAERLNVTAMPTFVFLKGE

TrEMBL top hitse value%identityAlignment
A0A0A0LLJ2 Thioredoxin6.9e-1657.78Show/hide
Query:  MAEEMQVIEIRNPEEFDSQVKRGDDALKLIVSNFTASQCPPCRFIAPIFIQLAKKSPN------------AIAERLNVTAMPTFVFLKGE
        MAEE QVI I N +EFD QV+ G +A KLIV +FTAS  PPCRFIAPIF +LAKK+P+            AIA R NV AMPTF F++ E
Subjt:  MAEEMQVIEIRNPEEFDSQVKRGDDALKLIVSNFTASQCPPCRFIAPIFIQLAKKSPN------------AIAERLNVTAMPTFVFLKGE

A0A0A0LPD3 Thioredoxin domain-containing protein8.4e-1452.22Show/hide
Query:  MAEEMQVIEIRNPEEFDSQVKRGDDALKLIVSNFTASQCPPCRFIAPIFIQLAKKSPN------------AIAERLNVTAMPTFVFLKGE
        MA+E +VI I + EEFD+QV+ G +  K+IV +FTAS CPPCRFIAPIF  LAKK+ +            AIA R +V AMPTF F++ E
Subjt:  MAEEMQVIEIRNPEEFDSQVKRGDDALKLIVSNFTASQCPPCRFIAPIFIQLAKKSPN------------AIAERLNVTAMPTFVFLKGE

A0A6J1CST8 thioredoxin H-type 1-like4.9e-1453.41Show/hide
Query:  MAEEMQVIEIRNPEEFDSQVKRGDDALKLIVSNFTASQCPPCRFIAPIFIQLAK------------KSPNAIAERLNVTAMPTFVFLK
        MAEE QVI + N E FD  +K+G ++ KLIV +FTAS CPPCRFIAPIF +LAK                 ++E+  VTAMPTFVFLK
Subjt:  MAEEMQVIEIRNPEEFDSQVKRGDDALKLIVSNFTASQCPPCRFIAPIFIQLAK------------KSPNAIAERLNVTAMPTFVFLK

A0A6J1HFK3 thioredoxin H5-like1.2e-1556.18Show/hide
Query:  MAEEMQVIEIRNPEEFDSQVKRGDDALKLIVSNFTASQCPPCRFIAPIFIQLAKKSPNA------------IAERLNVTAMPTFVFLKG
        MA E QVI +R  EEFD+ VK+G +A KLIV +FTAS CPPCRFIAP+F ++AK   N             IA++  VTAMPTFVFLKG
Subjt:  MAEEMQVIEIRNPEEFDSQVKRGDDALKLIVSNFTASQCPPCRFIAPIFIQLAKKSPNA------------IAERLNVTAMPTFVFLKG

A0A6J1KB35 thioredoxin H5-like2.8e-1752.53Show/hide
Query:  LREHRILLEPMAEEMQVIEIRNPEEFDSQVKRGDDALKLIVSNFTASQCPPCRFIAPIFIQLAKKSPNA------------IAERLNVTAMPTFVFLKG
        L++   L EPMA E Q I +R  +EFD+ VK+G +A KLIV +FTAS CPPCRFIAP+F ++AK   N             IA++  VTAMPTFVFLKG
Subjt:  LREHRILLEPMAEEMQVIEIRNPEEFDSQVKRGDDALKLIVSNFTASQCPPCRFIAPIFIQLAKKSPNA------------IAERLNVTAMPTFVFLKG

SwissProt top hitse value%identityAlignment
A2YIW7 Thioredoxin H-type1.2e-1447.13Show/hide
Query:  AEEMQVIEIRNPEEFDSQVKRGDDALKLIVSNFTASQCPPCRFIAPIFIQLAKKSPNA------------IAERLNVTAMPTFVFLK
        AEE  VI   N +EFD+Q+ +  +A K+++ +FTAS C PCRFIAP+F + AKK P A            +AE+ NV AMPTF+F+K
Subjt:  AEEMQVIEIRNPEEFDSQVKRGDDALKLIVSNFTASQCPPCRFIAPIFIQLAKKSPNA------------IAERLNVTAMPTFVFLK

P68177 Thioredoxin H-type 16.8e-1343.68Show/hide
Query:  QVIEIRNPEEFDSQVKRGDDALKLIVSNFTASQCPPCRFIAPIFIQLAKKSPN------------AIAERLNVTAMPTFVFLKGEWK
        +VI     E++++++K   ++ KLIV +FTA  CPPCRFIAPIF++LAKK  +             +A+  +V AMPTFV++KGE K
Subjt:  QVIEIRNPEEFDSQVKRGDDALKLIVSNFTASQCPPCRFIAPIFIQLAKKSPN------------AIAERLNVTAMPTFVFLKGEWK

Q0D840 Thioredoxin H11.2e-1447.13Show/hide
Query:  AEEMQVIEIRNPEEFDSQVKRGDDALKLIVSNFTASQCPPCRFIAPIFIQLAKKSPNA------------IAERLNVTAMPTFVFLK
        AEE  VI   N +EFD+Q+ +  +A K+++ +FTAS C PCRFIAP+F + AKK P A            +AE+ NV AMPTF+F+K
Subjt:  AEEMQVIEIRNPEEFDSQVKRGDDALKLIVSNFTASQCPPCRFIAPIFIQLAKKSPNA------------IAERLNVTAMPTFVFLK

Q39241 Thioredoxin H52.4e-1346.59Show/hide
Query:  MAEEMQVIEIRNPEEFDSQVKRGDDALKLIVSNFTASQCPPCRFIAPIFIQLAKKSPN------------AIAERLNVTAMPTFVFLK
        MA E +VI     E ++ +VK  +++ KLIV +FTAS CPPCRFIAP+F ++AKK  N            A+A+   V AMPTFVF+K
Subjt:  MAEEMQVIEIRNPEEFDSQVKRGDDALKLIVSNFTASQCPPCRFIAPIFIQLAKKSPN------------AIAERLNVTAMPTFVFLK

Q42403 Thioredoxin H33.1e-1345.16Show/hide
Query:  MAEEMQVIEIRNPEEFDSQVKRGDDALKLIVSNFTASQCPPCRFIAPIFIQLAKK------------SPNAIAERLNVTAMPTFVFLK-GEWK
        MA E +VI     E++  ++K  +++ KLIV +FTA+ CPPCRFIAP+F  LAKK              N +AE   V AMPTF+F+K GE K
Subjt:  MAEEMQVIEIRNPEEFDSQVKRGDDALKLIVSNFTASQCPPCRFIAPIFIQLAKK------------SPNAIAERLNVTAMPTFVFLK-GEWK

Arabidopsis top hitse value%identityAlignment
AT1G19730.1 Thioredoxin superfamily protein1.0e-1144.32Show/hide
Query:  AEEMQVIEIRNPEEFDSQVKRGDDALKLIVSNFTASQCPPCRFIAPIFIQLAKK-------------SPNAIAERLNVTAMPTFVFLK
        AEE QVI     + +  Q+ +  ++ KLIV +FTAS CPPCR IAPIF  LAKK                ++A+   V AMPTFVF+K
Subjt:  AEEMQVIEIRNPEEFDSQVKRGDDALKLIVSNFTASQCPPCRFIAPIFIQLAKK-------------SPNAIAERLNVTAMPTFVFLK

AT1G45145.1 thioredoxin H-type 51.7e-1446.59Show/hide
Query:  MAEEMQVIEIRNPEEFDSQVKRGDDALKLIVSNFTASQCPPCRFIAPIFIQLAKKSPN------------AIAERLNVTAMPTFVFLK
        MA E +VI     E ++ +VK  +++ KLIV +FTAS CPPCRFIAP+F ++AKK  N            A+A+   V AMPTFVF+K
Subjt:  MAEEMQVIEIRNPEEFDSQVKRGDDALKLIVSNFTASQCPPCRFIAPIFIQLAKKSPN------------AIAERLNVTAMPTFVFLK

AT2G35010.1 thioredoxin O18.0e-0931.37Show/hide
Query:  NLREHRILLEPMAEEMQVIEIRNPEEFDSQVKRGDDALKLIVSNFTASQCPPCRFIAPIFIQLAKKSPNAIA--------------ERLNVTAMPTFVFL
        +L   R L      E  V+ +++ EEF + + +  D     V  FTA+ C PCRFI+P+ ++L+K+ P+                  +LN+TA+PT  F 
Subjt:  NLREHRILLEPMAEEMQVIEIRNPEEFDSQVKRGDDALKLIVSNFTASQCPPCRFIAPIFIQLAKKSPNAIA--------------ERLNVTAMPTFVFL

Query:  KG
        KG
Subjt:  KG

AT3G51030.1 thioredoxin H-type 12.7e-1242.53Show/hide
Query:  AEEMQVIEIRNPEEFDSQVKRGDDALKLIVSNFTASQCPPCRFIAPIFIQLAKKSPN------------AIAERLNVTAMPTFVFLK
        +EE QVI     E ++ Q+++ +++  L+V +FTAS C PCRFIAP F  LAKK PN            ++A    + AMPTF+FLK
Subjt:  AEEMQVIEIRNPEEFDSQVKRGDDALKLIVSNFTASQCPPCRFIAPIFIQLAKKSPN------------AIAERLNVTAMPTFVFLK

AT5G42980.1 thioredoxin 32.2e-1445.16Show/hide
Query:  MAEEMQVIEIRNPEEFDSQVKRGDDALKLIVSNFTASQCPPCRFIAPIFIQLAKK------------SPNAIAERLNVTAMPTFVFLK-GEWK
        MA E +VI     E++  ++K  +++ KLIV +FTA+ CPPCRFIAP+F  LAKK              N +AE   V AMPTF+F+K GE K
Subjt:  MAEEMQVIEIRNPEEFDSQVKRGDDALKLIVSNFTASQCPPCRFIAPIFIQLAKK------------SPNAIAERLNVTAMPTFVFLK-GEWK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TGGAATATATATTTTATAACAATAGTCACATTTTTGCCAGATACGCTTGCGTTAAGATCCACACAATTAGAGCGCGTAATAAAAGCAAACTTAAGGGAACACCGAATTTT
GTTGGAACCAATGGCTGAAGAAATGCAAGTGATTGAGATTCGTAACCCTGAGGAATTCGATTCGCAAGTCAAGCGTGGAGACGATGCCCTTAAACTGATTGTGTCGAATT
TTACTGCTTCCCAATGTCCGCCATGCCGTTTCATTGCTCCAATTTTCATACAATTGGCTAAGAAGTCCCCCAATGCAATCGCTGAGAGGTTGAATGTTACTGCAATGCCG
ACCTTTGTTTTCCTGAAAGGAGAGTGGAAGTTCATAGGATTGTGGATGCTGACAAAGTGGCATAAATATACGGTCAGCTAA
mRNA sequenceShow/hide mRNA sequence
TGGAATATATATTTTATAACAATAGTCACATTTTTGCCAGATACGCTTGCGTTAAGATCCACACAATTAGAGCGCGTAATAAAAGCAAACTTAAGGGAACACCGAATTTT
GTTGGAACCAATGGCTGAAGAAATGCAAGTGATTGAGATTCGTAACCCTGAGGAATTCGATTCGCAAGTCAAGCGTGGAGACGATGCCCTTAAACTGATTGTGTCGAATT
TTACTGCTTCCCAATGTCCGCCATGCCGTTTCATTGCTCCAATTTTCATACAATTGGCTAAGAAGTCCCCCAATGCAATCGCTGAGAGGTTGAATGTTACTGCAATGCCG
ACCTTTGTTTTCCTGAAAGGAGAGTGGAAGTTCATAGGATTGTGGATGCTGACAAAGTGGCATAAATATACGGTCAGCTAATTCGAAGATCGTTCTCCCTTTTATTATTG
GTGGTGTATTGATGATTCTGGTTTTGAGTTTGTCCTACTTGTGAATTTTCATCACATTGTGTTTCAGTTGTTTACTTGTTTGATGAATGTATGTAGAACAATCAATGTAT
AATAAGATTTAACATATATGATAAATTAGTTGCTTAAGCTTTTGAATTCTAATCTTTGGCTCATTTAGGCTAAATGATAAAAAATGCC
Protein sequenceShow/hide protein sequence
WNIYFITIVTFLPDTLALRSTQLERVIKANLREHRILLEPMAEEMQVIEIRNPEEFDSQVKRGDDALKLIVSNFTASQCPPCRFIAPIFIQLAKKSPNAIAERLNVTAMP
TFVFLKGEWKFIGLWMLTKWHKYTVS