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CcUC10G192830 (gene) of Watermelon (PI 537277) v1 genome

Gene IDCcUC10G192830
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationCicolChr10:10441610..10444636
RNA-Seq ExpressionCcUC10G192830
SyntenyCcUC10G192830
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
DAD30368.1 TPA_asm: hypothetical protein HUJ06_009219 [Nelumbo nucifera]2.8e-0641.98Show/hide
Query:  IWHYGNMGEYSVKSGYKCAILHRILSWRYGSIVGSTWWNRLWKLPIPAKVAFRIMGVLRHRGIVVRPSCQVCRRKEESVSH
        IWH+   G YSVKSGY+ A   R L+      V S+ W++LWKLPIP KV   +  V R    +   SC +C    E++SH
Subjt:  IWHYGNMGEYSVKSGYKCAILHRILSWRYGSIVGSTWWNRLWKLPIPAKVAFRIMGVLRHRGIVVRPSCQVCRRKEESVSH

GAY61101.1 hypothetical protein CUMW_207140, partial [Citrus unshiu]3.6e-0632.97Show/hide
Query:  IWHYGNMGEYSVKSGYKCAILHRILSWRYGSIVGSTWWNRLWKLPIPAKVAFRIMGVLRH----------RGIVVRPSCQVCRRKEESVSH
        IWH+G  G+Y+VKSGY+ A+  R  +    S      WN +W L +P K+   +    ++          R IV  P+CQ+C+   E+V H
Subjt:  IWHYGNMGEYSVKSGYKCAILHRILSWRYGSIVGSTWWNRLWKLPIPAKVAFRIMGVLRH----------RGIVVRPSCQVCRRKEESVSH

XP_030479077.1 uncharacterized protein LOC115696311 [Cannabis sativa]5.6e-0738.46Show/hide
Query:  IWHYGNMGEYSVKSGYKCAILHRILSWRYGSIVGSTWWNRLWKLPIPAKV---AFRIMG-------VLRHRGIVVRPSCQVCRRKEESVSH
        IWH+ + G Y+VKSGY  A+    ++    S +   WWNRLW L +P KV   A+R++         L HR I V  SC +C    ES  H
Subjt:  IWHYGNMGEYSVKSGYKCAILHRILSWRYGSIVGSTWWNRLWKLPIPAKV---AFRIMG-------VLRHRGIVVRPSCQVCRRKEESVSH

XP_030487384.1 uncharacterized protein LOC115704310 [Cannabis sativa]2.5e-0737.63Show/hide
Query:  IWHYGNMGEYSVKSGYKCAILHRILSWRYGSIVGSTWWNRLWKLPIPAKVAFRIM----------GVLRHRGIVVRPSCQVCRRKE-ESVSHK
        +WHY   GEYSV+SGY+ A   ++   +  +     WW  LWKL IP KV   +            VL HR I V P C  C   E E+V H+
Subjt:  IWHYGNMGEYSVKSGYKCAILHRILSWRYGSIVGSTWWNRLWKLPIPAKVAFRIM----------GVLRHRGIVVRPSCQVCRRKE-ESVSHK

XP_030505314.1 uncharacterized protein LOC115720302 [Cannabis sativa]4.3e-0737.36Show/hide
Query:  IWHYGNMGEYSVKSGYKCAILHRILSWRYGSIVGSTWWNRLWKLPIPAKV----------AFRIMGVLRHRGIVVRPSCQVCRRKEESVSH
        IWH+   G YSVKSGY  A   R       S   ++WWNR WKL +P K+          A  +   L HR I+  P C  C    ES++H
Subjt:  IWHYGNMGEYSVKSGYKCAILHRILSWRYGSIVGSTWWNRLWKLPIPAKV----------AFRIMGVLRHRGIVVRPSCQVCRRKEESVSH

TrEMBL top hitse value%identityAlignment
A0A2H5Q8Y3 Uncharacterized protein1.7e-0632.97Show/hide
Query:  IWHYGNMGEYSVKSGYKCAILHRILSWRYGSIVGSTWWNRLWKLPIPAKVAFRIMGVLRH----------RGIVVRPSCQVCRRKEESVSH
        IWH+G  G+Y+VKSGY+ A+  R  +    S      WN +W L +P K+   +    ++          R IV  P+CQ+C+   E+V H
Subjt:  IWHYGNMGEYSVKSGYKCAILHRILSWRYGSIVGSTWWNRLWKLPIPAKVAFRIMGVLRH----------RGIVVRPSCQVCRRKEESVSH

A0A2H5Q972 Uncharacterized protein (Fragment)1.7e-0632.97Show/hide
Query:  IWHYGNMGEYSVKSGYKCAILHRILSWRYGSIVGSTWWNRLWKLPIPAKVAFRIMGVLRH----------RGIVVRPSCQVCRRKEESVSH
        IWH+G  G+Y+VKSGY+ A+  R  +    S      WN +W L +P K+   +    ++          R IV  P+CQ+C+   E+V H
Subjt:  IWHYGNMGEYSVKSGYKCAILHRILSWRYGSIVGSTWWNRLWKLPIPAKVAFRIMGVLRH----------RGIVVRPSCQVCRRKEESVSH

A0A803P5E3 Uncharacterized protein4.6e-0731.87Show/hide
Query:  IWHYGNMGEYSVKSGYKCAILHRILSWRYGSIVGSTWWNRLWKLPIPAK----------VAFRIMGVLRHRGIVVRPSCQVCRRKEESVSH
        IWH+ N G Y++KSGYK A+L         +    TWW + W L IP+K          V   ++  L  R I     C +C R+++++ H
Subjt:  IWHYGNMGEYSVKSGYKCAILHRILSWRYGSIVGSTWWNRLWKLPIPAK----------VAFRIMGVLRHRGIVVRPSCQVCRRKEESVSH

A0A803QG02 Uncharacterized protein2.7e-0738.46Show/hide
Query:  IWHYGNMGEYSVKSGYKCAILHRILSWRYGSIVGSTWWNRLWKLPIPAKV---AFRIMG-------VLRHRGIVVRPSCQVCRRKEESVSH
        IWH+ + G Y+VKSGY  A+    ++    S +   WWNRLW L +P KV   A+R++         L HR I V  SC +C    ES  H
Subjt:  IWHYGNMGEYSVKSGYKCAILHRILSWRYGSIVGSTWWNRLWKLPIPAKV---AFRIMG-------VLRHRGIVVRPSCQVCRRKEESVSH

A0A803QNF7 Uncharacterized protein7.8e-0734.78Show/hide
Query:  IWHYGNMGEYSVKSGYKCAILHRILSWRYGSIVGSTWWNRLWKLPIPAKVA----------FRIMGVLRHRGIVVRPSCQVCRR-KEESVSH
        +WHY   GEYSV+SGY+ A   R    +   +    WW  +W+L IP+K+                VL  R + + P CQ C   K E VSH
Subjt:  IWHYGNMGEYSVKSGYKCAILHRILSWRYGSIVGSTWWNRLWKLPIPAKVA----------FRIMGVLRHRGIVVRPSCQVCRR-KEESVSH

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATTTGGCACTATGGTAACATGGGTGAGTACTCGGTGAAGAGCGGCTATAAATGTGCTATTCTTCATAGAATTTTGAGTTGGAGGTACGGGTCGATCGTAGGGTCAACGTG
GTGGAATCGTCTTTGGAAGCTTCCTATTCCTGCTAAAGTTGCTTTTCGTATCATGGGAGTACTACGACATAGGGGTATTGTAGTTCGTCCTTCGTGTCAGGTGTGTAGGC
GTAAGGAGGAATCCGTGAGTCATAAGTAA
mRNA sequenceShow/hide mRNA sequence
ATTTGGCACTATGGTAACATGGGTGAGTACTCGGTGAAGAGCGGCTATAAATGTGCTATTCTTCATAGAATTTTGAGTTGGAGGTACGGGTCGATCGTAGGGTCAACGTG
GTGGAATCGTCTTTGGAAGCTTCCTATTCCTGCTAAAGTTGCTTTTCGTATCATGGGAGTACTACGACATAGGGGTATTGTAGTTCGTCCTTCGTGTCAGGTGTGTAGGC
GTAAGGAGGAATCCGTGAGTCATAAGTAA
Protein sequenceShow/hide protein sequence
IWHYGNMGEYSVKSGYKCAILHRILSWRYGSIVGSTWWNRLWKLPIPAKVAFRIMGVLRHRGIVVRPSCQVCRRKEESVSHK