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CcUC10G193090 (gene) of Watermelon (PI 537277) v1 genome

Gene IDCcUC10G193090
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionYcf15
Genome locationCicolChr10:11136678..11136984
RNA-Seq ExpressionCcUC10G193090
SyntenyCcUC10G193090
Gene Ontology termsGO:0009507 - chloroplast (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
QIB71551.1 Ycf15 [Siraitia grosvenorii]1.6e-0896.67Show/hide
Query:  LIFTTKKHWILFRVGPERRRKAGMPTGLYY
        LIFTTKKHWILFRVGPERRRKAGMPTG+YY
Subjt:  LIFTTKKHWILFRVGPERRRKAGMPTGLYY

QTT58051.1 hypothetical protein RF15 [Clethra fargesii]2.8e-0882.35Show/hide
Query:  NNESLIFTTKKHWILFRVGPERRRKAGMPTGLYY
        N+E  IFTTKK+WILFR+GPERRRKAGMPTG+YY
Subjt:  NNESLIFTTKKHWILFRVGPERRRKAGMPTGLYY

RWR98153.1 hypothetical protein CKAN_02765500 [Cinnamomum micranthum f. kanehirae]6.6e-1063.64Show/hide
Query:  MPDEMVVAICYNNES----------LIFTTKKHWILFRVGPERRRKAGMPTGLYY
        M DEMVVAIC NNE            IFTT+++WILFR+GPERRRKAGMPT +YY
Subjt:  MPDEMVVAICYNNES----------LIFTTKKHWILFRVGPERRRKAGMPTGLYY

YP_009653461.1 Ycf15 protein [Forestiera angustifolia]2.8e-0882.35Show/hide
Query:  NNESLIFTTKKHWILFRVGPERRRKAGMPTGLYY
        N+E  IFTTKK+WILFR+GPERRRKAGMPTG+YY
Subjt:  NNESLIFTTKKHWILFRVGPERRRKAGMPTGLYY

YP_009676143.1 hypothetical chloroplast RF15 [Berchemiella wilsonii]4.7e-0887.5Show/hide
Query:  ESLIFTTKKHWILFRVGPERRRKAGMPTGLYY
        E LIFTTKK+WILFR+GPERRRKAGMPTG+YY
Subjt:  ESLIFTTKKHWILFRVGPERRRKAGMPTGLYY

TrEMBL top hitse value%identityAlignment
A0A443Q561 Uncharacterized protein3.2e-1063.64Show/hide
Query:  MPDEMVVAICYNNES----------LIFTTKKHWILFRVGPERRRKAGMPTGLYY
        M DEMVVAIC NNE            IFTT+++WILFR+GPERRRKAGMPT +YY
Subjt:  MPDEMVVAICYNNES----------LIFTTKKHWILFRVGPERRRKAGMPTGLYY

A0A4D6SVT8 Uncharacterized protein ycf151.3e-0882.35Show/hide
Query:  NNESLIFTTKKHWILFRVGPERRRKAGMPTGLYY
        N+E  IFTTKK+WILFR+GPERRRKAGMPTG+YY
Subjt:  NNESLIFTTKKHWILFRVGPERRRKAGMPTGLYY

A0A4D6SWX7 Uncharacterized protein ycf151.3e-0882.35Show/hide
Query:  NNESLIFTTKKHWILFRVGPERRRKAGMPTGLYY
        N+E  IFTTKK+WILFR+GPERRRKAGMPTG+YY
Subjt:  NNESLIFTTKKHWILFRVGPERRRKAGMPTGLYY

A0A4D6T395 Uncharacterized protein ycf151.3e-0882.35Show/hide
Query:  NNESLIFTTKKHWILFRVGPERRRKAGMPTGLYY
        N+E  IFTTKK+WILFR+GPERRRKAGMPTG+YY
Subjt:  NNESLIFTTKKHWILFRVGPERRRKAGMPTGLYY

A0A6C0U8L9 Ycf157.8e-0996.67Show/hide
Query:  LIFTTKKHWILFRVGPERRRKAGMPTGLYY
        LIFTTKKHWILFRVGPERRRKAGMPTG+YY
Subjt:  LIFTTKKHWILFRVGPERRRKAGMPTGLYY

SwissProt top hitse value%identityAlignment
Q2MIE3 Putative uncharacterized protein ycf154.0e-1089.66Show/hide
Query:  IFTTKKHWILFRVGPERRRKAGMPTGLYY
        IFTTKK+WILFR+GPERRRKAGMPTG+YY
Subjt:  IFTTKKHWILFRVGPERRRKAGMPTGLYY

Q2VED6 Putative uncharacterized protein ycf154.0e-1089.66Show/hide
Query:  IFTTKKHWILFRVGPERRRKAGMPTGLYY
        IFTTKK+WILFR+GPERRRKAGMPTG+YY
Subjt:  IFTTKKHWILFRVGPERRRKAGMPTGLYY

Q33BV4 Putative uncharacterized protein ycf154.0e-1089.66Show/hide
Query:  IFTTKKHWILFRVGPERRRKAGMPTGLYY
        IFTTKK+WILFR+GPERRRKAGMPTG+YY
Subjt:  IFTTKKHWILFRVGPERRRKAGMPTGLYY

Q3C1N3 Putative uncharacterized protein ycf154.0e-1089.66Show/hide
Query:  IFTTKKHWILFRVGPERRRKAGMPTGLYY
        IFTTKK+WILFR+GPERRRKAGMPTG+YY
Subjt:  IFTTKKHWILFRVGPERRRKAGMPTGLYY

Q7FNR5 Putative uncharacterized protein ycf154.0e-1089.66Show/hide
Query:  IFTTKKHWILFRVGPERRRKAGMPTGLYY
        IFTTKK+WILFR+GPERRRKAGMPTG+YY
Subjt:  IFTTKKHWILFRVGPERRRKAGMPTGLYY

Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCGGATGAAATGGTTGTTGCTATCTGTTACAATAACGAATCATTGATATTCACGACCAAGAAACACTGGATTCTCTTTCGGGTAGGCCCTGAAAGGAGAAGGAAGGC
TGGAATGCCAACAGGCCTCTATTATTGA
mRNA sequenceShow/hide mRNA sequence
ATGCCGGATGAAATGGTTGTTGCTATCTGTTACAATAACGAATCATTGATATTCACGACCAAGAAACACTGGATTCTCTTTCGGGTAGGCCCTGAAAGGAGAAGGAAGGC
TGGAATGCCAACAGGCCTCTATTATTGA
Protein sequenceShow/hide protein sequence
MPDEMVVAICYNNESLIFTTKKHWILFRVGPERRRKAGMPTGLYY