; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CcUC10G193170 (gene) of Watermelon (PI 537277) v1 genome

Gene IDCcUC10G193170
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionS locus-related glycoprotein 1 binding pollen coat
Genome locationCicolChr10:11517640..11518238
RNA-Seq ExpressionCcUC10G193170
SyntenyCcUC10G193170
Gene Ontology termsGO:0031640 - killing of cells of other organism (biological process)
GO:0050832 - defense response to fungus (biological process)
InterPro domainsIPR010851 - Defensin-like protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0042348.1 S locus-related glycoprotein 1 binding pollen coat [Cucumis melo var. makuwa]9.6e-1873.21Show/hide
Query:  ISLILVPQGASAAPRCQDILYNNGCTLDDCGKKCWEKHHSISHQCIPTNPAQTIYA
        +++ILVPQGA A  RCQD LY+ GCTL DCG+KCWEKHH  SHQCIPT+P QTIYA
Subjt:  ISLILVPQGASAAPRCQDILYNNGCTLDDCGKKCWEKHHSISHQCIPTNPAQTIYA

KAE8649772.1 hypothetical protein Csa_012405, partial [Cucumis sativus]5.1e-1976.36Show/hide
Query:  SLILVPQGASAAPRCQDILYNNGCTLDDCGKKCWEKHHSISHQCIPTNPAQTIYA
        +L+L  Q  SAA RCQD+LYN GC L+DCGKKCWEKHH+ISHQCIPTNP+QTIYA
Subjt:  SLILVPQGASAAPRCQDILYNNGCTLDDCGKKCWEKHHSISHQCIPTNPAQTIYA

KGN64987.1 hypothetical protein Csa_022748 [Cucumis sativus]1.4e-1665.08Show/hide
Query:  SFLFLNTISLILVPQGASAAPRCQDILYNNGCTLDDCGKKCWEKHHSISHQCIPTNPAQTIYA
        + + +  +++I +PQGA AA RCQDILYN+GCTL DCG+KCWEKHH  S QCIPT+P QTIYA
Subjt:  SFLFLNTISLILVPQGASAAPRCQDILYNNGCTLDDCGKKCWEKHHSISHQCIPTNPAQTIYA

OMO53797.1 S locus-related glycoprotein 1 binding pollen coat [Corchorus capsularis]1.4e-0855.17Show/hide
Query:  LNTISLILVPQGASAAPRCQDILYNNGCTLDDCGKKCWEKHHSISHQCIPTNPAQTIY
        +N++++ +  Q A A  RCQ ILY  GCTL DC KKC++K  S+  QCIPTN AQTIY
Subjt:  LNTISLILVPQGASAAPRCQDILYNNGCTLDDCGKKCWEKHHSISHQCIPTNPAQTIY

OMO95288.1 S locus-related glycoprotein 1 binding pollen coat [Corchorus olitorius]1.4e-0857.38Show/hide
Query:  LFLNTISLIL-VPQGASAAPRCQDILYNNGCTLDDCGKKCWEKHHSISHQCIPTNPAQTIY
        L  + IS+ + V   A A  RCQ ILY  GCTL DC KKC++K  SI  QCIPTN AQTIY
Subjt:  LFLNTISLIL-VPQGASAAPRCQDILYNNGCTLDDCGKKCWEKHHSISHQCIPTNPAQTIY

TrEMBL top hitse value%identityAlignment
A0A0A0L2R3 Uncharacterized protein8.5e-2067.74Show/hide
Query:  FLFLNTISLILVPQGASAAPRCQDILYNNGCTLDDCGKKCWEKHHSISHQCIPTNPAQTIYA
        F  +  ++L+L  Q  SAA RCQD+LYN GC L+DCGKKCWEKHH++SHQCIPTNP+QTIYA
Subjt:  FLFLNTISLILVPQGASAAPRCQDILYNNGCTLDDCGKKCWEKHHSISHQCIPTNPAQTIYA

A0A0A0LVZ5 Uncharacterized protein6.7e-1765.08Show/hide
Query:  SFLFLNTISLILVPQGASAAPRCQDILYNNGCTLDDCGKKCWEKHHSISHQCIPTNPAQTIYA
        + + +  +++I +PQGA AA RCQDILYN+GCTL DCG+KCWEKHH  S QCIPT+P QTIYA
Subjt:  SFLFLNTISLILVPQGASAAPRCQDILYNNGCTLDDCGKKCWEKHHSISHQCIPTNPAQTIYA

A0A1R3G6W7 S locus-related glycoprotein 1 binding pollen coat6.7e-0955.17Show/hide
Query:  LNTISLILVPQGASAAPRCQDILYNNGCTLDDCGKKCWEKHHSISHQCIPTNPAQTIY
        +N++++ +  Q A A  RCQ ILY  GCTL DC KKC++K  S+  QCIPTN AQTIY
Subjt:  LNTISLILVPQGASAAPRCQDILYNNGCTLDDCGKKCWEKHHSISHQCIPTNPAQTIY

A0A1R3JKF5 S locus-related glycoprotein 1 binding pollen coat6.7e-0957.38Show/hide
Query:  LFLNTISLIL-VPQGASAAPRCQDILYNNGCTLDDCGKKCWEKHHSISHQCIPTNPAQTIY
        L  + IS+ + V   A A  RCQ ILY  GCTL DC KKC++K  SI  QCIPTN AQTIY
Subjt:  LFLNTISLIL-VPQGASAAPRCQDILYNNGCTLDDCGKKCWEKHHSISHQCIPTNPAQTIY

A0A5A7THQ7 S locus-related glycoprotein 1 binding pollen coat4.7e-1873.21Show/hide
Query:  ISLILVPQGASAAPRCQDILYNNGCTLDDCGKKCWEKHHSISHQCIPTNPAQTIYA
        +++ILVPQGA A  RCQD LY+ GCTL DCG+KCWEKHH  SHQCIPT+P QTIYA
Subjt:  ISLILVPQGASAAPRCQDILYNNGCTLDDCGKKCWEKHHSISHQCIPTNPAQTIYA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGTTTTCCTTCTTGTTCCTGAATACTATTTCATTGATCTTGGTGCCTCAAGGAGCCTCAGCTGCCCCAAGATGTCAAGATATATTGTATAACAATGGGTGC
ACTCTTGATGATTGCGGAAAGAAATGTTGGGAGAAGCACCATAGTATTTCACATCAATGCATTCCAACTAATCCTGCTCAAACCATCTATGCT
mRNA sequenceShow/hide mRNA sequence
ATGGAGTTTTCCTTCTTGTTCCTGAATACTATTTCATTGATCTTGGTGCCTCAAGGAGCCTCAGCTGCCCCAAGATGTCAAGATATATTGTATAACAATGGGTGC
ACTCTTGATGATTGCGGAAAGAAATGTTGGGAGAAGCACCATAGTATTTCACATCAATGCATTCCAACTAATCCTGCTCAAACCATCTATGCT
Protein sequenceShow/hide protein sequence
MEFSFLFLNTISLILVPQGASAAPRCQDILYNNGCTLDDCGKKCWEKHHSISHQCIPTNPAQTIYA