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CcUC10G193200 (gene) of Watermelon (PI 537277) v1 genome

Gene IDCcUC10G193200
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionS locus-related glycoprotein 1 binding pollen coat
Genome locationCicolChr10:11535020..11535565
RNA-Seq ExpressionCcUC10G193200
SyntenyCcUC10G193200
Gene Ontology termsGO:0031640 - killing of cells of other organism (biological process)
GO:0050832 - defense response to fungus (biological process)
InterPro domainsIPR010851 - Defensin-like protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
BBH07492.1 hypothetical protein Prudu_019451 [Prunus dulcis]8.3e-1262.07Show/hide
Query:  VPQGASAAPRCQDILYNNGCTLDDCGKKCWEKHHSISHQCIPTNPTQTIYACYCFFDC
        VPQ A A  RC + LY +GCTL DCGKKCWEKHH   ++CI  N  QT YACYC F+C
Subjt:  VPQGASAAPRCQDILYNNGCTLDDCGKKCWEKHHSISHQCIPTNPTQTIYACYCFFDC

KAA0042348.1 S locus-related glycoprotein 1 binding pollen coat [Cucumis melo var. makuwa]5.0e-2569.88Show/hide
Query:  MAKLVPSSSIIFIALIFAVSLILVPQGASAAPRCQDILYNNGCTLDDCGKKCWEKHHSISHQCIPTNPTQTIYACYCFFDCGK
        M KL  SS I+ IAL  AV++ILVPQGA A  RCQD LY+ GCTL DCG+KCWEKHH  SHQCIPT+P QTIYACYCF++CG+
Subjt:  MAKLVPSSSIIFIALIFAVSLILVPQGASAAPRCQDILYNNGCTLDDCGKKCWEKHHSISHQCIPTNPTQTIYACYCFFDCGK

KAE8649772.1 hypothetical protein Csa_012405, partial [Cucumis sativus]5.0e-2579.37Show/hide
Query:  SLILVPQGASAAPRCQDILYNNGCTLDDCGKKCWEKHHSISHQCIPTNPTQTIYACYCFFDCG
        +L+L  Q  SAA RCQD+LYN GC L+DCGKKCWEKHH+ISHQCIPTNP+QTIYACYCFFDCG
Subjt:  SLILVPQGASAAPRCQDILYNNGCTLDDCGKKCWEKHHSISHQCIPTNPTQTIYACYCFFDCG

KGN64987.1 hypothetical protein Csa_022748 [Cucumis sativus]9.5e-2470.73Show/hide
Query:  MAKLVPSSSIIFIALIFAVSLILVPQGASAAPRCQDILYNNGCTLDDCGKKCWEKHHSISHQCIPTNPTQTIYACYCFFDCG
        M KL  SS I+ I LI AV++I +PQGA AA RCQDILYN+GCTL DCG+KCWEKHH  S QCIPT+P QTIYACYCF+ CG
Subjt:  MAKLVPSSSIIFIALIFAVSLILVPQGASAAPRCQDILYNNGCTLDDCGKKCWEKHHSISHQCIPTNPTQTIYACYCFFDCG

OMO95288.1 S locus-related glycoprotein 1 binding pollen coat [Corchorus olitorius]8.3e-1249.4Show/hide
Query:  MAKLVPSSSIIFIALIFAVSLILVPQG--ASAAPRCQDILYNNGCTLDDCGKKCWEKHHSISHQCIPTNPTQTIYACYCFFDC
        MAK   +  ++ I L+F+V  + +P    A A  RCQ ILY  GCTL DC KKC++K  SI  QCIPTN  QTIY C C ++C
Subjt:  MAKLVPSSSIIFIALIFAVSLILVPQG--ASAAPRCQDILYNNGCTLDDCGKKCWEKHHSISHQCIPTNPTQTIYACYCFFDC

TrEMBL top hitse value%identityAlignment
A0A0A0KYP7 Uncharacterized protein4.3e-1454.67Show/hide
Query:  SSSIIFIALIFAVSLILVPQGASAAPRCQDILYNNGCTLDDCGKKCWEKHHSISHQCIPTNPTQTIYACYCFFDC
        S  +  I +IFAVS+ILVPQG SA  +CQD LY  GC   +CG+KC + HH  + +CI T+PT T YACYCF++C
Subjt:  SSSIIFIALIFAVSLILVPQGASAAPRCQDILYNNGCTLDDCGKKCWEKHHSISHQCIPTNPTQTIYACYCFFDC

A0A0A0L2R3 Uncharacterized protein3.6e-2977.63Show/hide
Query:  SSSIIFIALIFAVSLILVPQGASAAPRCQDILYNNGCTLDDCGKKCWEKHHSISHQCIPTNPTQTIYACYCFFDCG
        SS II  ALIFAV+L+L  Q  SAA RCQD+LYN GC L+DCGKKCWEKHH++SHQCIPTNP+QTIYACYCFFDCG
Subjt:  SSSIIFIALIFAVSLILVPQGASAAPRCQDILYNNGCTLDDCGKKCWEKHHSISHQCIPTNPTQTIYACYCFFDCG

A0A0A0LVZ5 Uncharacterized protein4.6e-2470.73Show/hide
Query:  MAKLVPSSSIIFIALIFAVSLILVPQGASAAPRCQDILYNNGCTLDDCGKKCWEKHHSISHQCIPTNPTQTIYACYCFFDCG
        M KL  SS I+ I LI AV++I +PQGA AA RCQDILYN+GCTL DCG+KCWEKHH  S QCIPT+P QTIYACYCF+ CG
Subjt:  MAKLVPSSSIIFIALIFAVSLILVPQGASAAPRCQDILYNNGCTLDDCGKKCWEKHHSISHQCIPTNPTQTIYACYCFFDCG

A0A1R3JKF5 S locus-related glycoprotein 1 binding pollen coat4.0e-1249.4Show/hide
Query:  MAKLVPSSSIIFIALIFAVSLILVPQG--ASAAPRCQDILYNNGCTLDDCGKKCWEKHHSISHQCIPTNPTQTIYACYCFFDC
        MAK   +  ++ I L+F+V  + +P    A A  RCQ ILY  GCTL DC KKC++K  SI  QCIPTN  QTIY C C ++C
Subjt:  MAKLVPSSSIIFIALIFAVSLILVPQG--ASAAPRCQDILYNNGCTLDDCGKKCWEKHHSISHQCIPTNPTQTIYACYCFFDC

A0A5A7THQ7 S locus-related glycoprotein 1 binding pollen coat2.4e-2569.88Show/hide
Query:  MAKLVPSSSIIFIALIFAVSLILVPQGASAAPRCQDILYNNGCTLDDCGKKCWEKHHSISHQCIPTNPTQTIYACYCFFDCGK
        M KL  SS I+ IAL  AV++ILVPQGA A  RCQD LY+ GCTL DCG+KCWEKHH  SHQCIPT+P QTIYACYCF++CG+
Subjt:  MAKLVPSSSIIFIALIFAVSLILVPQGASAAPRCQDILYNNGCTLDDCGKKCWEKHHSISHQCIPTNPTQTIYACYCFFDCGK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGAAGCTAGTTCCTTCTTCCAGTATTATTTTCATTGCCCTTATTTTTGCAGTTTCCTTGATCTTGGTGCCTCAAGGAGCCTCAGCTGCCCCGAGATGTCAAGATAT
ATTGTATAACAATGGGTGCACTCTTGATGATTGCGGAAAGAAATGTTGGGAAAAGCACCATAGTATTTCACATCAATGCATTCCAACGAATCCTACTCAAACCATCTATG
CTTGTTATTGTTTCTTTGATTGCGGTAAAAAAAATGATTTTGTGACATCATTCTAA
mRNA sequenceShow/hide mRNA sequence
AAATTAACAAAACCAAACTACTTTCTTGAGAATATGGCGAAGCTAGTTCCTTCTTCCAGTATTATTTTCATTGCCCTTATTTTTGCAGTTTCCTTGATCTTGGTGCCTCA
AGGAGCCTCAGCTGCCCCGAGATGTCAAGATATATTGTATAACAATGGGTGCACTCTTGATGATTGCGGAAAGAAATGTTGGGAAAAGCACCATAGTATTTCACATCAAT
GCATTCCAACGAATCCTACTCAAACCATCTATGCTTGTTATTGTTTCTTTGATTGCGGTAAAAAAAATGATTTTGTGACATCATTCTAATTTTATGTAATGCT
Protein sequenceShow/hide protein sequence
MAKLVPSSSIIFIALIFAVSLILVPQGASAAPRCQDILYNNGCTLDDCGKKCWEKHHSISHQCIPTNPTQTIYACYCFFDCGKKNDFVTSF