CuGenDBv2

Gene ID	CcUC10G193260
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	cytochrome c oxidase subunit 6a, mitochondrial
Genome location	CicolChr10:11622930..11629642
RNA-Seq Expression	CcUC10G193260
Synteny	CcUC10G193260
Gene Ontology terms	GO:0006123 - mitochondrial electron transport, cytochrome c to oxygen (biological process) GO:0050790 - regulation of catalytic activity (biological process) GO:1902600 - proton transmembrane transport (biological process) GO:0005751 - mitochondrial respiratory chain complex IV (cellular component) GO:0004129 - cytochrome-c oxidase activity (molecular function) GO:0030234 - enzyme regulator activity (molecular function)
InterPro domains	IPR001349 - Cytochrome c oxidase, subunit VIa IPR036418 - Cytochrome c oxidase, subunit VIa superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_008450167.1 PREDICTED: cytochrome c oxidase subunit 6a, mitochondrial [Cucumis melo]

5.9e-48

95.92

Show/hide

Query:  MAMASIRSNLLRAAVRGASRNSVQPKRGFASSAHDDARETAKWEKITYAGIATCTILAFYNLSKGHPHHEEPPAYPYLHIRNKEFPWGPDGLFEVKHH
        MAMASIRSN LRAA+RGASRNSVQPKRGFASSAHDDARETAKWEKITYAGI TC+ILAFYNLSKGHPHHEEPPAYPYLHIRNKEFPWGPDGLFEVKHH
Subjt:  MAMASIRSNLLRAAVRGASRNSVQPKRGFASSAHDDARETAKWEKITYAGIATCTILAFYNLSKGHPHHEEPPAYPYLHIRNKEFPWGPDGLFEVKHH

XP_011650608.1 cytochrome c oxidase subunit 6a, mitochondrial isoform X2 [Cucumis sativus]

3.5e-48

95.92

Show/hide

Query:  MAMASIRSNLLRAAVRGASRNSVQPKRGFASSAHDDARETAKWEKITYAGIATCTILAFYNLSKGHPHHEEPPAYPYLHIRNKEFPWGPDGLFEVKHH
        MAMASIRSNLLRAA+RGASRNSVQPKRGFASSAHDDARETAKWEKITYAGI TC+ILAFYNLSKGHPHHEEPPAYPY+HIRNKEFPWGPDGLFEVKHH
Subjt:  MAMASIRSNLLRAAVRGASRNSVQPKRGFASSAHDDARETAKWEKITYAGIATCTILAFYNLSKGHPHHEEPPAYPYLHIRNKEFPWGPDGLFEVKHH

XP_023001309.1 cytochrome c oxidase subunit 6a, mitochondrial-like [Cucurbita maxima]

8.6e-47

93.88

Show/hide

Query:  MAMASIRSNLLRAAVRGASRNSVQPKRGFASSAHDDARETAKWEKITYAGIATCTILAFYNLSKGHPHHEEPPAYPYLHIRNKEFPWGPDGLFEVKHH
        MAMA+IRSNLLRAA+RGASRNS QPKRGFASSAHDDA ETAKWEKITYAGIA CT LAFYNLSKGHPHHEEPPAYPYLHIRNKEFPWGPDGLFEVKHH
Subjt:  MAMASIRSNLLRAAVRGASRNSVQPKRGFASSAHDDARETAKWEKITYAGIATCTILAFYNLSKGHPHHEEPPAYPYLHIRNKEFPWGPDGLFEVKHH

XP_023551866.1 cytochrome c oxidase subunit 6a, mitochondrial-like [Cucurbita pepo subsp. pepo]

1.9e-46

92.86

Show/hide

Query:  MAMASIRSNLLRAAVRGASRNSVQPKRGFASSAHDDARETAKWEKITYAGIATCTILAFYNLSKGHPHHEEPPAYPYLHIRNKEFPWGPDGLFEVKHH
        MAMA+IRSNLLRAA+RGASRNS QPKRGFASSAHDDARETAKWEKITYAGI +C+ILAFYNLSKGHPH+EEPPAYPYLHIRNKEFPWGPDGLFEVKHH
Subjt:  MAMASIRSNLLRAAVRGASRNSVQPKRGFASSAHDDARETAKWEKITYAGIATCTILAFYNLSKGHPHHEEPPAYPYLHIRNKEFPWGPDGLFEVKHH

XP_038905594.1 cytochrome c oxidase subunit 6a, mitochondrial [Benincasa hispida]

3.1e-49

98.98

Show/hide

Query:  MAMASIRSNLLRAAVRGASRNSVQPKRGFASSAHDDARETAKWEKITYAGIATCTILAFYNLSKGHPHHEEPPAYPYLHIRNKEFPWGPDGLFEVKHH
        MAMASIRSNLLRAAVRGASRNS QPKRGFASSAHDDARETAKWEKITYAGIATCTILAFYNLSKGHPHHEEPPAYPYLHIRNKEFPWGPDGLFEVKHH
Subjt:  MAMASIRSNLLRAAVRGASRNSVQPKRGFASSAHDDARETAKWEKITYAGIATCTILAFYNLSKGHPHHEEPPAYPYLHIRNKEFPWGPDGLFEVKHH

TrEMBL top hits

e value

%identity

Alignment

A0A0A0L3I0 Uncharacterized protein

1.4e-47

95.83

Show/hide

Query:  MASIRSNLLRAAVRGASRNSVQPKRGFASSAHDDARETAKWEKITYAGIATCTILAFYNLSKGHPHHEEPPAYPYLHIRNKEFPWGPDGLFEVKHH
        MASIRSNLLRAA+RGASRNSVQPKRGFASSAHDDARETAKWEKITYAGI TC+ILAFYNLSKGHPHHEEPPAYPY+HIRNKEFPWGPDGLFEVKHH
Subjt:  MASIRSNLLRAAVRGASRNSVQPKRGFASSAHDDARETAKWEKITYAGIATCTILAFYNLSKGHPHHEEPPAYPYLHIRNKEFPWGPDGLFEVKHH

A0A1S3BPM0 cytochrome c oxidase subunit 6a, mitochondrial

2.9e-48

95.92

Show/hide

Query:  MAMASIRSNLLRAAVRGASRNSVQPKRGFASSAHDDARETAKWEKITYAGIATCTILAFYNLSKGHPHHEEPPAYPYLHIRNKEFPWGPDGLFEVKHH
        MAMASIRSN LRAA+RGASRNSVQPKRGFASSAHDDARETAKWEKITYAGI TC+ILAFYNLSKGHPHHEEPPAYPYLHIRNKEFPWGPDGLFEVKHH
Subjt:  MAMASIRSNLLRAAVRGASRNSVQPKRGFASSAHDDARETAKWEKITYAGIATCTILAFYNLSKGHPHHEEPPAYPYLHIRNKEFPWGPDGLFEVKHH

A0A6J1ERW3 cytochrome c oxidase subunit 6a, mitochondrial-like

1.6e-46

92.86

Show/hide

Query:  MAMASIRSNLLRAAVRGASRNSVQPKRGFASSAHDDARETAKWEKITYAGIATCTILAFYNLSKGHPHHEEPPAYPYLHIRNKEFPWGPDGLFEVKHH
        MAMA+IRSNLLRAA RGASRNS QPKRGFASSAHDDARETAKWEKITYAGI +C+ILAFYNLSKGHPH+EEPPAYPYLHIRNKEFPWGPDGLFEVKHH
Subjt:  MAMASIRSNLLRAAVRGASRNSVQPKRGFASSAHDDARETAKWEKITYAGIATCTILAFYNLSKGHPHHEEPPAYPYLHIRNKEFPWGPDGLFEVKHH

A0A6J1FPI8 cytochrome c oxidase subunit 6a, mitochondrial-like

1.2e-46

93.88

Show/hide

Query:  MAMASIRSNLLRAAVRGASRNSVQPKRGFASSAHDDARETAKWEKITYAGIATCTILAFYNLSKGHPHHEEPPAYPYLHIRNKEFPWGPDGLFEVKHH
        MAMA+IRSNLLRAA RGASRNS QPKRGFASSAHDDA ETAKWEKITYAGIA CT LAFYNLSKGHPHHEEPPAYPYLHIRNKEFPWGPDGLFEVKHH
Subjt:  MAMASIRSNLLRAAVRGASRNSVQPKRGFASSAHDDARETAKWEKITYAGIATCTILAFYNLSKGHPHHEEPPAYPYLHIRNKEFPWGPDGLFEVKHH

A0A6J1KMD3 cytochrome c oxidase subunit 6a, mitochondrial-like

4.2e-47

93.88

Show/hide

Query:  MAMASIRSNLLRAAVRGASRNSVQPKRGFASSAHDDARETAKWEKITYAGIATCTILAFYNLSKGHPHHEEPPAYPYLHIRNKEFPWGPDGLFEVKHH
        MAMA+IRSNLLRAA+RGASRNS QPKRGFASSAHDDA ETAKWEKITYAGIA CT LAFYNLSKGHPHHEEPPAYPYLHIRNKEFPWGPDGLFEVKHH
Subjt:  MAMASIRSNLLRAAVRGASRNSVQPKRGFASSAHDDARETAKWEKITYAGIATCTILAFYNLSKGHPHHEEPPAYPYLHIRNKEFPWGPDGLFEVKHH

SwissProt top hits

e value

%identity

Alignment

Q9T070 Cytochrome c oxidase subunit 6a, mitochondrial

5.1e-34

71.72

Show/hide

Query:  MAMASIRSNLLRAAVRGASRNSVQPKRGFASSA-HDDARETAKWEKITYAGIATCTILAFYNLSKGHPHHEEPPAYPYLHIRNKEFPWGPDGLFEVKHH
        MA A +RS L RA  R A + SV PKR F+SSA HDDA E AKWEKITY GIA+CT LA Y LSKGH H E+PPAYP++HIRNKEFPWGPDGLFEVKH+
Subjt:  MAMASIRSNLLRAAVRGASRNSVQPKRGFASSA-HDDARETAKWEKITYAGIATCTILAFYNLSKGHPHHEEPPAYPYLHIRNKEFPWGPDGLFEVKHH

Arabidopsis top hits

e value

%identity

Alignment

AT4G37830.1 cytochrome c oxidase-related

3.6e-35

71.72

Show/hide

Query:  MAMASIRSNLLRAAVRGASRNSVQPKRGFASSA-HDDARETAKWEKITYAGIATCTILAFYNLSKGHPHHEEPPAYPYLHIRNKEFPWGPDGLFEVKHH
        MA A +RS L RA  R A + SV PKR F+SSA HDDA E AKWEKITY GIA+CT LA Y LSKGH H E+PPAYP++HIRNKEFPWGPDGLFEVKH+
Subjt:  MAMASIRSNLLRAAVRGASRNSVQPKRGFASSA-HDDARETAKWEKITYAGIATCTILAFYNLSKGHPHHEEPPAYPYLHIRNKEFPWGPDGLFEVKHH

AT4G37830.2 cytochrome c oxidase-related

6.2e-27

63.64

Show/hide

Query:  MAMASIRSNLLRAAVRGASRNSVQPKRGFASSA-HDDARETAKWEKITYAGIATCTILAFYNLSKGHPHHEEPPAYPYLHIRNKEFPWGPDGLFEVKHH
        MA A +RS L RA  R A + SV PKR F+SSA HDDA E AKWEKITY GIA+CT LA Y LSKGH H E+PP          EFPWGPDGLFEVKH+
Subjt:  MAMASIRSNLLRAAVRGASRNSVQPKRGFASSA-HDDARETAKWEKITYAGIATCTILAFYNLSKGHPHHEEPPAYPYLHIRNKEFPWGPDGLFEVKHH

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGCAATGGCGTCGATCCGATCTAATCTTCTTCGCGCCGCCGTCCGCGGTGCCTCTCGAAACTCCGTTCAGCCTAAGCGCGGCTTTGCTTCCTCTGCTCACGATGATGC
TCGTGAAACGGCAAAGTGGGAGAAGATTACTTATGCAGGCATTGCAACCTGCACTATTTTAGCATTCTATAATCTATCAAAGGGCCACCCCCACCATGAAGAGCCCCCTG
CATATCCGTATTTGCACATACGCAATAAAGAGTTCCCATGGGGTCCTGATGGGCTCTTTGAGGTGAAGCATCACTGA

mRNA sequence

Show/hide mRNA sequence

GATCATTTCAATCGACTAGTCAATTTGTGAGCGAGAACCAAAGAGAAAATGGCAATGGCGTCGATCCGATCTAATCTTCTTCGCGCCGCCGTCCGCGGTGCCTCTCGAAA
CTCCGTTCAGCCTAAGCGCGGCTTTGCTTCCTCTGCTCACGATGATGCTCGTGAAACGGCAAAGTGGGAGAAGATTACTTATGCAGGCATTGCAACCTGCACTATTTTAG
CATTCTATAATCTATCAAAGGGCCACCCCCACCATGAAGAGCCCCCTGCATATCCGTATTTGCACATACGCAATAAAGAGTTCCCATGGGGTCCTGATGGGCTCTTTGAG
GTGAAGCATCACTGAGGACTATTTTTGGTTGAAGGGGACATGGAGCATAGTAATTCTACTTCTCATTTTATTCCATATCAGAAAGACTTCATCCACTGGTTGGGTGAGAT
TTTTCTTTCCAAAGGATGGCATCGCCATTTTGCATTTGTTAAAATGCTTTCAGGGGATTATTATGTGTGGATTGTGGT

Protein sequence

Show/hide protein sequence

MAMASIRSNLLRAAVRGASRNSVQPKRGFASSAHDDARETAKWEKITYAGIATCTILAFYNLSKGHPHHEEPPAYPYLHIRNKEFPWGPDGLFEVKHH

CcUC10G193260 (gene) of Watermelon (PI 537277) v1 genome