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CcUC10G193410 (gene) of Watermelon (PI 537277) v1 genome

Gene IDCcUC10G193410
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionOrf112b protein
Genome locationCicolChr10:12359594..12364321
RNA-Seq ExpressionCcUC10G193410
SyntenyCcUC10G193410
Gene Ontology termsGO:0005739 - mitochondrion (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
NP_064070.1 orf112b gene product [Beta vulgaris subsp. vulgaris]9.1e-0568.89Show/hide
Query:  MSIQSLIPVHNFLEFSSYCSSLAKMSQRWPSFLKPQVVLKPISLV
        MSIQSLIPVHNFLE+SS CSSLA+ S  WPSFL    ++K ISL+
Subjt:  MSIQSLIPVHNFLEFSSYCSSLAKMSQRWPSFLKPQVVLKPISLV
TrEMBL top hitse value%identityAlignment
E6ZE16 Uncharacterized protein orf112b4.4e-0568.89Show/hide
Query:  MSIQSLIPVHNFLEFSSYCSSLAKMSQRWPSFLKPQVVLKPISLV
        MSIQSLIPVHNFLE+SS CSSLA+ S  WPSFL    ++K ISL+
Subjt:  MSIQSLIPVHNFLEFSSYCSSLAKMSQRWPSFLKPQVVLKPISLV
G2XLR4 Uncharacterized protein4.4e-0568.89Show/hide
Query:  MSIQSLIPVHNFLEFSSYCSSLAKMSQRWPSFLKPQVVLKPISLV
        MSIQSLIPVHNFLE+SS CSSLA+ S  WPSFL    ++K ISL+
Subjt:  MSIQSLIPVHNFLEFSSYCSSLAKMSQRWPSFLKPQVVLKPISLV
Q9MF72 Orf112b protein4.4e-0568.89Show/hide
Query:  MSIQSLIPVHNFLEFSSYCSSLAKMSQRWPSFLKPQVVLKPISLV
        MSIQSLIPVHNFLE+SS CSSLA+ S  WPSFL    ++K ISL+
Subjt:  MSIQSLIPVHNFLEFSSYCSSLAKMSQRWPSFLKPQVVLKPISLV
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCCATCCAATCTCTGATTCCAGTCCATAACTTCCTTGAATTTAGCTCCTATTGCTCTTCTCTGGCTAAGATGTCACAACGTTGGCCATCTTTTCTTAAGCCTCAGGT
TGTGTTAAAGCCTATCTCTCTAGTTGATGGGTTAGCCCAGAAGATTCATAAGAACCCGTTTTCGGATGTTCTTCTTCTTTCGCCAAGAGATCCCGTTTATCCCCGAAGCC
AATTGTTCTTGAATTTCGCATATTGGGCTTACTTTTCCAGTAGTTATCAGGCTGGAACTATCCCTGAGGAGGTTTATGAGCCTCTCGTTTTCTTCTCTCATCTCCCCGGG
AGCTTGGGGTTCGCGGTGGTGGAGGAACTGGATCGGAAAAAAGAGGGATTCCAGTTTAGCAACTCCGAGTTAGCTGGCTCTGCCGTGCCTATAGCAAGTTTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGTCCATCCAATCTCTGATTCCAGTCCATAACTTCCTTGAATTTAGCTCCTATTGCTCTTCTCTGGCTAAGATGTCACAACGTTGGCCATCTTTTCTTAAGCCTCAGGT
TGTGTTAAAGCCTATCTCTCTAGTTGATGGGTTAGCCCAGAAGATTCATAAGAACCCGTTTTCGGATGTTCTTCTTCTTTCGCCAAGAGATCCCGTTTATCCCCGAAGCC
AATTGTTCTTGAATTTCGCATATTGGGCTTACTTTTCCAGTAGTTATCAGGCTGGAACTATCCCTGAGGAGGTTTATGAGCCTCTCGTTTTCTTCTCTCATCTCCCCGGG
AGCTTGGGGTTCGCGGTGGTGGAGGAACTGGATCGGAAAAAAGAGGGATTCCAGTTTAGCAACTCCGAGTTAGCTGGCTCTGCCGTGCCTATAGCAAGTTTTTAA
Protein sequenceShow/hide protein sequence
MSIQSLIPVHNFLEFSSYCSSLAKMSQRWPSFLKPQVVLKPISLVDGLAQKIHKNPFSDVLLLSPRDPVYPRSQLFLNFAYWAYFSSSYQAGTIPEEVYEPLVFFSHLPG
SLGFAVVEELDRKKEGFQFSNSELAGSAVPIASF