; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CcUC10G193440 (gene) of Watermelon (PI 537277) v1 genome

Gene IDCcUC10G193440
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionNAD(P)H-quinone oxidoreductase subunit K, chloroplastic
Genome locationCicolChr10:12368657..12369985
RNA-Seq ExpressionCcUC10G193440
SyntenyCcUC10G193440
Gene Ontology termsGO:0009060 - aerobic respiration (biological process)
GO:0015990 - electron transport coupled proton transport (biological process)
GO:0022900 - electron transport chain (biological process)
GO:0046034 - ATP metabolic process (biological process)
GO:0009507 - chloroplast (cellular component)
GO:0009579 - thylakoid (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0031966 - mitochondrial membrane (cellular component)
GO:0008137 - NADH dehydrogenase (ubiquinone) activity (molecular function)
GO:0046872 - metal ion binding (molecular function)
GO:0048038 - quinone binding (molecular function)
GO:0051539 - 4 iron, 4 sulfur cluster binding (molecular function)
InterPro domainsIPR000440 - NADH:ubiquinone/plastoquinone oxidoreductase, chain 3
IPR038430 - NADH:ubiquinone oxidoreductase, subunit 3 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
BBN68609.1 hypothetical protein Prudu_498S000400, partial [Prunus dulcis]7.1e-5273.91Show/hide
Query:  MGDAWVQFRIRYYMFALVFVVFDVETVFLYPWAMSFDVLGT-------------IKKN-------IETVMNS-LEFPLLNRTTQTSVISTTSNDLSNWSR
        +GDAW+QFRIRYYMFALVFVVFDVETVFLYPWAMSFDVLG              I  N       IETVMNS +EFPLL+RTTQ SVISTTS+DLSNWSR
Subjt:  MGDAWVQFRIRYYMFALVFVVFDVETVFLYPWAMSFDVLGT-------------IKKN-------IETVMNS-LEFPLLNRTTQTSVISTTSNDLSNWSR

Query:  LSTLWSLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADFILTAGGMFSTDSYSTVR
        LS+LW LLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQAD ILTAG +    + S VR
Subjt:  LSTLWSLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADFILTAGGMFSTDSYSTVR

KAG6540670.1 hypothetical protein Mapa_018002 [Marchantia paleacea]1.2e-4661.02Show/hide
Query:  MGDAWVQFRIRYYMFALVFVVFDVETVFLYPWAMSFDVLGTIKKNIETVMNSLEFPLLNRTTQTSVISTTSNDLSNWSRLSTLWSLLYGTSCCFIEFASL
        MG+A +QF+IRYYMFALVFV+FDVETVFLYPWAMSF       K+   + NS+E  +LN+T   S+I TT ND SNW+RLS+LW LLYGTSCCFIEFASL
Subjt:  MGDAWVQFRIRYYMFALVFVVFDVETVFLYPWAMSFDVLGTIKKNIETVMNSLEFPLLNRTTQTSVISTTSNDLSNWSRLSTLWSLLYGTSCCFIEFASL

Query:  IGSRFDFDRYGLVPRSSPRQADFILTA---------------------------------GGMFSTDSYSTVRGVDK
        IGSRFDFDRYGLVPRSSPRQAD I+TA                                 GGMFSTDSY+TVRGVDK
Subjt:  IGSRFDFDRYGLVPRSSPRQADFILTA---------------------------------GGMFSTDSYSTVRGVDK

OTF84306.1 putative NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 [Helianthus annuus]1.3e-5666.32Show/hide
Query:  MGDAWVQFRIRYYMFALVFVVFDVETVFLYPWAMSFDVLGTI----------------KKNIETVMNSLEFPLLNRTTQTSVISTTSNDLSNWSRLSTLW
        +GDAW+QFRIRYYMFALVFVVFDVETVFLYPWAMSFDVLG                   + IE VMNS+EFPL +RTTQ SVISTT NDLSNWSRLS+LW
Subjt:  MGDAWVQFRIRYYMFALVFVVFDVETVFLYPWAMSFDVLGTI----------------KKNIETVMNSLEFPLLNRTTQTSVISTTSNDLSNWSRLSTLW

Query:  SLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADFILTA---------------------------------GGMFSTDSYSTVRGVDK
         LLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQAD ILTA                                 GGMFSTDSYSTVRGVDK
Subjt:  SLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADFILTA---------------------------------GGMFSTDSYSTVRGVDK

RDY14683.1 ATP synthase subunit beta, chloroplastic, partial [Mucuna pruriens]5.1e-5863.86Show/hide
Query:  MGDAWVQFRIRYYMFALVFVVFDVETVFLYPWAMSFDVL-------------------------GTIKKNIETVMNSLEFPLLNRTTQTSVISTTSNDLS
        +GDAW+QFRIRYYMFAL+FVVFDVETVFLYPWAMSFDVL                         GTIKKNIET+MNS+EFPLL++TT+ SVISTT NDLS
Subjt:  MGDAWVQFRIRYYMFALVFVVFDVETVFLYPWAMSFDVL-------------------------GTIKKNIETVMNSLEFPLLNRTTQTSVISTTSNDLS

Query:  NWSRLSTLWSLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADFILTA---------------------------------GGMFSTDSYSTVRGV
        NWS+LS+LW LLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQAD ILTA                                 GGMFSTDSYST+RGV
Subjt:  NWSRLSTLWSLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADFILTA---------------------------------GGMFSTDSYSTVRGV

Query:  DK
        DK
Subjt:  DK

YP_010010436.1 NADH-plastoquinone oxidoreductase subunit 3 [Hippeastrum rutilum]3.4e-5458.64Show/hide
Query:  MGDAWVQFRIRYYMFALVFVVFDVETVFLYPWAMSFDVLGTI-------------------------------------------KKNIETVMNSLEFPL
        MGDAW+QFRIRYYMFALVFVVFDVETVFLYPWAMSFDVLG                                             K +IETVMN ++FPL
Subjt:  MGDAWVQFRIRYYMFALVFVVFDVETVFLYPWAMSFDVLGTI-------------------------------------------KKNIETVMNSLEFPL

Query:  LNRTTQTSVISTTSNDLSNWSRLSTLWSLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADFILTA------------------------------
        L++TT  SVISTTSNDLSNWSRLS+LW LLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQAD ILTA                              
Subjt:  LNRTTQTSVISTTSNDLSNWSRLSTLWSLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADFILTA------------------------------

Query:  ---GGMFSTDSYSTVRGVDK
           GGMFSTDSYSTVRGVDK
Subjt:  ---GGMFSTDSYSTVRGVDK

TrEMBL top hitse value%identityAlignment
A0A1Y3BXB0 NADH-quinone oxidoreductase subunit B5.2e-5667.2Show/hide
Query:  MGDAWVQFRIRYYMFALVFVVFDVETVFLYPWAMSFDVLGTIKKNIET------------VMNSLEFPLLNRTTQTSVISTTSNDLSNWSRLSTLWSLLY
        +GDAW+QFRIRYYMFALVFVVFDVETVFLYPWAMSFDVLG +   +E             VMNS+EFPL +RTTQ SVISTT NDLSNWSRLS+LW LLY
Subjt:  MGDAWVQFRIRYYMFALVFVVFDVETVFLYPWAMSFDVLGTIKKNIET------------VMNSLEFPLLNRTTQTSVISTTSNDLSNWSRLSTLWSLLY

Query:  GTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADFILTA---------------------------------GGMFSTDSYSTVRGVDK
        GTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQAD ILTA                                 GGMFSTDSYSTVRGVDK
Subjt:  GTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADFILTA---------------------------------GGMFSTDSYSTVRGVDK

A0A1Y3BXS1 NADH dehydrogenase subunit 36.1e-5766.32Show/hide
Query:  MGDAWVQFRIRYYMFALVFVVFDVETVFLYPWAMSFDVLGTI----------------KKNIETVMNSLEFPLLNRTTQTSVISTTSNDLSNWSRLSTLW
        +GDAW+QFRIRYYMFALVFVVFDVETVFLYPWAMSFDVLG                   + IE VMNS+EFPL +RTTQ SVISTT NDLSNWSRLS+LW
Subjt:  MGDAWVQFRIRYYMFALVFVVFDVETVFLYPWAMSFDVLGTI----------------KKNIETVMNSLEFPLLNRTTQTSVISTTSNDLSNWSRLSTLW

Query:  SLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADFILTA---------------------------------GGMFSTDSYSTVRGVDK
         LLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQAD ILTA                                 GGMFSTDSYSTVRGVDK
Subjt:  SLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADFILTA---------------------------------GGMFSTDSYSTVRGVDK

A0A371II26 NADH dehydrogenase subunit 3 (Fragment)2.5e-5863.86Show/hide
Query:  MGDAWVQFRIRYYMFALVFVVFDVETVFLYPWAMSFDVL-------------------------GTIKKNIETVMNSLEFPLLNRTTQTSVISTTSNDLS
        +GDAW+QFRIRYYMFAL+FVVFDVETVFLYPWAMSFDVL                         GTIKKNIET+MNS+EFPLL++TT+ SVISTT NDLS
Subjt:  MGDAWVQFRIRYYMFALVFVVFDVETVFLYPWAMSFDVL-------------------------GTIKKNIETVMNSLEFPLLNRTTQTSVISTTSNDLS

Query:  NWSRLSTLWSLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADFILTA---------------------------------GGMFSTDSYSTVRGV
        NWS+LS+LW LLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQAD ILTA                                 GGMFSTDSYST+RGV
Subjt:  NWSRLSTLWSLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADFILTA---------------------------------GGMFSTDSYSTVRGV

Query:  DK
        DK
Subjt:  DK

A0A5H2XP40 NADH dehydrogenase subunit 3 (Fragment)3.5e-5273.91Show/hide
Query:  MGDAWVQFRIRYYMFALVFVVFDVETVFLYPWAMSFDVLGT-------------IKKN-------IETVMNS-LEFPLLNRTTQTSVISTTSNDLSNWSR
        +GDAW+QFRIRYYMFALVFVVFDVETVFLYPWAMSFDVLG              I  N       IETVMNS +EFPLL+RTTQ SVISTTS+DLSNWSR
Subjt:  MGDAWVQFRIRYYMFALVFVVFDVETVFLYPWAMSFDVLGT-------------IKKN-------IETVMNS-LEFPLLNRTTQTSVISTTSNDLSNWSR

Query:  LSTLWSLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADFILTAGGMFSTDSYSTVR
        LS+LW LLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQAD ILTAG +    + S VR
Subjt:  LSTLWSLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADFILTAGGMFSTDSYSTVR

A0A7L8HZ13 NAD(P)H-quinone oxidoreductase subunit K, chloroplastic1.7e-5458.64Show/hide
Query:  MGDAWVQFRIRYYMFALVFVVFDVETVFLYPWAMSFDVLGTI-------------------------------------------KKNIETVMNSLEFPL
        MGDAW+QFRIRYYMFALVFVVFDVETVFLYPWAMSFDVLG                                             K +IETVMN ++FPL
Subjt:  MGDAWVQFRIRYYMFALVFVVFDVETVFLYPWAMSFDVLGTI-------------------------------------------KKNIETVMNSLEFPL

Query:  LNRTTQTSVISTTSNDLSNWSRLSTLWSLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADFILTA------------------------------
        L++TT  SVISTTSNDLSNWSRLS+LW LLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQAD ILTA                              
Subjt:  LNRTTQTSVISTTSNDLSNWSRLSTLWSLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADFILTA------------------------------

Query:  ---GGMFSTDSYSTVRGVDK
           GGMFSTDSYSTVRGVDK
Subjt:  ---GGMFSTDSYSTVRGVDK

SwissProt top hitse value%identityAlignment
A1XGP2 NAD(P)H-quinone oxidoreductase subunit K, chloroplastic1.1e-3969.53Show/hide
Query:  MNSLEFPLLNRTTQTSVISTTSNDLSNWSRLSTLWSLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADFILTA----------------------
        MNS+EFPLLN+TTQ SVISTTSNDLSNWSRLS+LW LLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQAD ILTA                      
Subjt:  MNSLEFPLLNRTTQTSVISTTSNDLSNWSRLSTLWSLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADFILTA----------------------

Query:  -----------GGMFSTDSYSTVRGVDK
                   GGMFSTDSYSTVRGVDK
Subjt:  -----------GGMFSTDSYSTVRGVDK

Q06GZ3 NAD(P)H-quinone oxidoreductase subunit K, chloroplastic1.5e-3969.53Show/hide
Query:  MNSLEFPLLNRTTQTSVISTTSNDLSNWSRLSTLWSLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADFILTA----------------------
        MNS+EFPLL+RTTQ SVISTTSNDLSNWSRLS+LW LLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQAD ILTA                      
Subjt:  MNSLEFPLLNRTTQTSVISTTSNDLSNWSRLSTLWSLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADFILTA----------------------

Query:  -----------GGMFSTDSYSTVRGVDK
                   GGMFSTDSYSTVRGVDK
Subjt:  -----------GGMFSTDSYSTVRGVDK

Q0G9L5 NAD(P)H-quinone oxidoreductase subunit K, chloroplastic1.5e-3969.53Show/hide
Query:  MNSLEFPLLNRTTQTSVISTTSNDLSNWSRLSTLWSLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADFILTA----------------------
        MNS+EFPLL+RTTQ SVISTTSNDLSNWSRLS+LW LLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQAD ILTA                      
Subjt:  MNSLEFPLLNRTTQTSVISTTSNDLSNWSRLSTLWSLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADFILTA----------------------

Query:  -----------GGMFSTDSYSTVRGVDK
                   GGMFSTDSYSTVRGVDK
Subjt:  -----------GGMFSTDSYSTVRGVDK

Q0G9V8 NAD(P)H-quinone oxidoreductase subunit K, chloroplastic1.5e-3969.53Show/hide
Query:  MNSLEFPLLNRTTQTSVISTTSNDLSNWSRLSTLWSLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADFILTA----------------------
        MNS+EFPLL+RTTQ SVISTTSNDLSNWSRLS+LW LLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQAD ILTA                      
Subjt:  MNSLEFPLLNRTTQTSVISTTSNDLSNWSRLSTLWSLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADFILTA----------------------

Query:  -----------GGMFSTDSYSTVRGVDK
                   GGMFSTDSYSTVRGVDK
Subjt:  -----------GGMFSTDSYSTVRGVDK

Q4VZH1 NAD(P)H-quinone oxidoreductase subunit K, chloroplastic3.8e-4070.31Show/hide
Query:  MNSLEFPLLNRTTQTSVISTTSNDLSNWSRLSTLWSLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADFILTA----------------------
        MNS+EFPLL+RTTQTSVISTTSNDLSNWSRLS+LW LLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQAD ILTA                      
Subjt:  MNSLEFPLLNRTTQTSVISTTSNDLSNWSRLSTLWSLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADFILTA----------------------

Query:  -----------GGMFSTDSYSTVRGVDK
                   GGMFSTDSYSTVRGVDK
Subjt:  -----------GGMFSTDSYSTVRGVDK

Arabidopsis top hitse value%identityAlignment
AT5G11770.1 NADH-ubiquinone oxidoreductase 20 kDa subunit, mitochondrial4.2e-1040.35Show/hide
Query:  NDLSNWSRLSTLWSLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADFILTAG
        +DL NW+R  ++W + +G +CC +E      +R+D DR+G++ R SPRQ+D ++ AG
Subjt:  NDLSNWSRLSTLWSLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADFILTAG

ATCG00430.1 photosystem II reaction center protein G7.4e-3966.41Show/hide
Query:  MNSLEFPLLNRTTQTSVISTTSNDLSNWSRLSTLWSLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADFILTA----------------------
        MNS++FP+L+RTT+ SVISTT NDLSNWSRLS+LW LLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQAD ILTA                      
Subjt:  MNSLEFPLLNRTTQTSVISTTSNDLSNWSRLSTLWSLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADFILTA----------------------

Query:  -----------GGMFSTDSYSTVRGVDK
                   GGMFSTDSYSTVRGVDK
Subjt:  -----------GGMFSTDSYSTVRGVDK

ATCG00440.1 NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 protein6.7e-1695Show/hide
Query:  MGDAWVQFRIRYYMFALVFVVFDVETVFLYPWAMSFDVLG
        +GDAW+QFRIRYYMFALVFVVFDVETVFLYPWAMSFDVLG
Subjt:  MGDAWVQFRIRYYMFALVFVVFDVETVFLYPWAMSFDVLG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGCGATGCTTGGGTACAATTTAGAATCCGTTATTATATGTTTGCTCTAGTTTTTGTTGTTTTTGATGTTGAAACGGTTTTTCTTTATCCATGGGCAATGAGTTTTGA
TGTATTAGGGACAATTAAAAAAAACATTGAGACAGTTATGAATTCCCTTGAGTTTCCCTTACTTAATCGAACAACCCAAACTTCCGTTATTTCAACTACATCAAATGATC
TTTCAAATTGGTCAAGACTCTCCACTTTATGGTCGCTTCTCTATGGTACCAGTTGTTGCTTCATTGAATTTGCTTCATTAATAGGTTCACGATTCGACTTTGATCGTTAT
GGACTGGTACCAAGATCTAGTCCTAGACAAGCAGACTTCATTTTAACAGCGGGAGGGATGTTCAGTACCGATTCTTATAGTACTGTTCGGGGAGTCGATAAAAGTGGTGG
AACGTGCGGAACCACATATTGGATTACTTTAGTGCGGCACGAAGCTGCTGACACCGAGTCGGCTCCTATGCCACGCAAATCAATCATGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGGCGATGCTTGGGTACAATTTAGAATCCGTTATTATATGTTTGCTCTAGTTTTTGTTGTTTTTGATGTTGAAACGGTTTTTCTTTATCCATGGGCAATGAGTTTTGA
TGTATTAGGGACAATTAAAAAAAACATTGAGACAGTTATGAATTCCCTTGAGTTTCCCTTACTTAATCGAACAACCCAAACTTCCGTTATTTCAACTACATCAAATGATC
TTTCAAATTGGTCAAGACTCTCCACTTTATGGTCGCTTCTCTATGGTACCAGTTGTTGCTTCATTGAATTTGCTTCATTAATAGGTTCACGATTCGACTTTGATCGTTAT
GGACTGGTACCAAGATCTAGTCCTAGACAAGCAGACTTCATTTTAACAGCGGGAGGGATGTTCAGTACCGATTCTTATAGTACTGTTCGGGGAGTCGATAAAAGTGGTGG
AACGTGCGGAACCACATATTGGATTACTTTAGTGCGGCACGAAGCTGCTGACACCGAGTCGGCTCCTATGCCACGCAAATCAATCATGTAG
Protein sequenceShow/hide protein sequence
MGDAWVQFRIRYYMFALVFVVFDVETVFLYPWAMSFDVLGTIKKNIETVMNSLEFPLLNRTTQTSVISTTSNDLSNWSRLSTLWSLLYGTSCCFIEFASLIGSRFDFDRY
GLVPRSSPRQADFILTAGGMFSTDSYSTVRGVDKSGGTCGTTYWITLVRHEAADTESAPMPRKSIM