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CcUC10G193660 (gene) of Watermelon (PI 537277) v1 genome

Gene IDCcUC10G193660
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionNAD(P)H-quinone oxidoreductase subunit H, chloroplastic
Genome locationCicolChr10:14955254..14955647
RNA-Seq ExpressionCcUC10G193660
SyntenyCcUC10G193660
Gene Ontology termsGO:0019684 - photosynthesis, light reaction (biological process)
GO:0009535 - chloroplast thylakoid membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0016655 - oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor (molecular function)
GO:0048038 - quinone binding (molecular function)
GO:0051287 - NAD binding (molecular function)
InterPro domainsIPR022885 - NAD(P)H-quinone oxidoreductase subunit D/H
IPR029014 - [NiFe]-hydrogenase, large subunit


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG4109411.1 hypothetical protein ERO13_1Z049694v2 [Gossypium hirsutum]2.1e-1591.49Show/hide
Query:  MLELSRITSHLLWLGPFMVDIGAQTPFFYIFRERELVYDLFEATTAI
        MLELSRI SHLLWLGPFM DIGAQTPFFYIFRERELVYDLFEATT +
Subjt:  MLELSRITSHLLWLGPFMVDIGAQTPFFYIFRERELVYDLFEATTAI
QCE14651.1 NADH dehydrogenase I subunit 7 [Vigna unguiculata]1.6e-1564.29Show/hide
Query:  MLELSRITSHLLWLGPFMVDIGAQTPFFYIFRERELVYDLFEATTAIH--------GKINRGKTYEWTSY
        MLELSRI SHLLWLGPFM DIGAQTPFFYIFREREL+YDLFEA T +         G + + K Y++ +Y
Subjt:  MLELSRITSHLLWLGPFMVDIGAQTPFFYIFRERELVYDLFEATTAIH--------GKINRGKTYEWTSY
TYJ00663.1 hypothetical protein E1A91_A13G100700v1 [Gossypium mustelinum]2.1e-1591.49Show/hide
Query:  MLELSRITSHLLWLGPFMVDIGAQTPFFYIFRERELVYDLFEATTAI
        MLELSRITSHLLWLGPFM DIGAQTPFFYIFRERELVYDLFEA T +
Subjt:  MLELSRITSHLLWLGPFMVDIGAQTPFFYIFRERELVYDLFEATTAI
YP_009462576.1 NADH-plastoquinone oxidoreductase subunit 7 [Boehmeria spicata]2.1e-1591.49Show/hide
Query:  MLELSRITSHLLWLGPFMVDIGAQTPFFYIFRERELVYDLFEATTAI
        MLELSRI SHLLWLGPFM DIGAQTPFFYIFRERELVYDLFEATT +
Subjt:  MLELSRITSHLLWLGPFMVDIGAQTPFFYIFRERELVYDLFEATTAI
YP_009462675.1 NADH-plastoquinone oxidoreductase subunit 7 [Boehmeria umbrosa]2.1e-1591.49Show/hide
Query:  MLELSRITSHLLWLGPFMVDIGAQTPFFYIFRERELVYDLFEATTAI
        MLELSRI SHLLWLGPFM DIGAQTPFFYIFRERELVYDLFEATT +
Subjt:  MLELSRITSHLLWLGPFMVDIGAQTPFFYIFRERELVYDLFEATTAI
TrEMBL top hitse value%identityAlignment
A0A2K9VR14 NAD(P)H-quinone oxidoreductase subunit H, chloroplastic1.0e-1591.49Show/hide
Query:  MLELSRITSHLLWLGPFMVDIGAQTPFFYIFRERELVYDLFEATTAI
        MLELSRI SHLLWLGPFM DIGAQTPFFYIFRERELVYDLFEATT +
Subjt:  MLELSRITSHLLWLGPFMVDIGAQTPFFYIFRERELVYDLFEATTAI
A0A411AV18 NAD(P)H-quinone oxidoreductase subunit H, chloroplastic1.0e-1591.49Show/hide
Query:  MLELSRITSHLLWLGPFMVDIGAQTPFFYIFRERELVYDLFEATTAI
        MLELSRI SHLLWLGPFM DIGAQTPFFYIFRERELVYDLFEATT +
Subjt:  MLELSRITSHLLWLGPFMVDIGAQTPFFYIFRERELVYDLFEATTAI
A0A4D6NNY3 NADH dehydrogenase I subunit 77.8e-1664.29Show/hide
Query:  MLELSRITSHLLWLGPFMVDIGAQTPFFYIFRERELVYDLFEATTAIH--------GKINRGKTYEWTSY
        MLELSRI SHLLWLGPFM DIGAQTPFFYIFREREL+YDLFEA T +         G + + K Y++ +Y
Subjt:  MLELSRITSHLLWLGPFMVDIGAQTPFFYIFRERELVYDLFEATTAIH--------GKINRGKTYEWTSY
A0A5D2QRS9 Complex1_49kDa domain-containing protein1.0e-1591.49Show/hide
Query:  MLELSRITSHLLWLGPFMVDIGAQTPFFYIFRERELVYDLFEATTAI
        MLELSRI SHLLWLGPFM DIGAQTPFFYIFRERELVYDLFEATT +
Subjt:  MLELSRITSHLLWLGPFMVDIGAQTPFFYIFRERELVYDLFEATTAI
A0A5J5VW89 Complex1_49kDa domain-containing protein1.0e-1591.49Show/hide
Query:  MLELSRITSHLLWLGPFMVDIGAQTPFFYIFRERELVYDLFEATTAI
        MLELSRI SHLLWLGPFM DIGAQTPFFYIFRERELVYDLFEATT +
Subjt:  MLELSRITSHLLWLGPFMVDIGAQTPFFYIFRERELVYDLFEATTAI
SwissProt top hitse value%identityAlignment
A0ZZ91 NAD(P)H-quinone oxidoreductase subunit H, chloroplastic1.0e-1789.36Show/hide
Query:  MLELSRITSHLLWLGPFMVDIGAQTPFFYIFRERELVYDLFEATTAI
        MLELSRI SHLLWLGPFM DIGAQTPFFYIFRERELVYDLFEA T +
Subjt:  MLELSRITSHLLWLGPFMVDIGAQTPFFYIFRERELVYDLFEATTAI
B1A990 NAD(P)H-quinone oxidoreductase subunit H, chloroplastic1.0e-1789.36Show/hide
Query:  MLELSRITSHLLWLGPFMVDIGAQTPFFYIFRERELVYDLFEATTAI
        MLELSRI SHLLWLGPFM DIGAQTPFFYIFRERELVYDLFEA T +
Subjt:  MLELSRITSHLLWLGPFMVDIGAQTPFFYIFRERELVYDLFEATTAI
Q09MC0 NAD(P)H-quinone oxidoreductase subunit H, chloroplastic1.0e-1789.36Show/hide
Query:  MLELSRITSHLLWLGPFMVDIGAQTPFFYIFRERELVYDLFEATTAI
        MLELSRI SHLLWLGPFM DIGAQTPFFYIFRERELVYDLFEA T +
Subjt:  MLELSRITSHLLWLGPFMVDIGAQTPFFYIFRERELVYDLFEATTAI
Q49KU2 NAD(P)H-quinone oxidoreductase subunit H, chloroplastic1.0e-1789.36Show/hide
Query:  MLELSRITSHLLWLGPFMVDIGAQTPFFYIFRERELVYDLFEATTAI
        MLELSRI SHLLWLGPFM DIGAQTPFFYIFRERELVYDLFEA T +
Subjt:  MLELSRITSHLLWLGPFMVDIGAQTPFFYIFRERELVYDLFEATTAI
Q4VZL2 NAD(P)H-quinone oxidoreductase subunit H, chloroplastic1.0e-1789.36Show/hide
Query:  MLELSRITSHLLWLGPFMVDIGAQTPFFYIFRERELVYDLFEATTAI
        MLELSRI SHLLWLGPFM DIGAQTPFFYIFRERELVYDLFEA T +
Subjt:  MLELSRITSHLLWLGPFMVDIGAQTPFFYIFRERELVYDLFEATTAI
Arabidopsis top hitse value%identityAlignment
ATCG01110.1 NAD(P)H dehydrogenase subunit H2.2e-1887.23Show/hide
Query:  MLELSRITSHLLWLGPFMVDIGAQTPFFYIFRERELVYDLFEATTAI
        MLELSRI SHLLWLGPFM DIGAQTPFFYIFRERE VYDLFEA T +
Subjt:  MLELSRITSHLLWLGPFMVDIGAQTPFFYIFRERELVYDLFEATTAI

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTGGAGTTGAGTCGTATAACTTCTCATCTGTTATGGCTTGGCCCTTTTATGGTGGATATTGGGGCACAGACTCCTTTCTTCTATATTTTCAGAGAAAGAGAATTAGT
ATATGATTTATTCGAAGCAACCACCGCAATTCATGGAAAGATTAATCGAGGAAAAACTTATGAATGGACCAGCTACAAGCAAAGACCTCATGATAGTGAATATGGGACCT
CACCACCCATCAATGCACGGTGTTCTTCAGCTCATCCTTACTTTGGATGG
mRNA sequenceShow/hide mRNA sequence
AAGCAACAACCGTAAATGGTCCAGAACAGTTGGGAAATATTCAAGTACCTAAAAGAGCCAGCTATATCAGAGTAATTATGTTGGAGTTGAGTCGTATAACTTCTCATCTG
TTATGGCTTGGCCCTTTTATGGTGGATATTGGGGCACAGACTCCTTTCTTCTATATTTTCAGAGAAAGAGAATTAGTATATGATTTATTCGAAGCAACCACCGCAATTCA
TGGAAAGATTAATCGAGGAAAAACTTATGAATGGACCAGCTACAAGCAAAGACCTCATGATAGTGAATATGGGACCTCACCACCCATCAATGCACGGTGTTCTTCAGCTC
ATCCTTACTTTGGATGG
Protein sequenceShow/hide protein sequence
MLELSRITSHLLWLGPFMVDIGAQTPFFYIFRERELVYDLFEATTAIHGKINRGKTYEWTSYKQRPHDSEYGTSPPINARCSSAHPYFGW