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CcUC10G193670 (gene) of Watermelon (PI 537277) v1 genome

Gene IDCcUC10G193670
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionRING-type domain-containing protein
Genome locationCicolChr10:15143798..15144256
RNA-Seq ExpressionCcUC10G193670
SyntenyCcUC10G193670
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
EOY33660.1 RING/U-box superfamily protein, putative [Theobroma cacao]4.7e-0544.29Show/hide
Query:  FAYRYDNKFQVDCMICLSKFVVDESQIDT-----------CIDTWLFSPVSCLVCKSTKFFSEKGGVGAG
        ++Y  D K+Q+DC ICLS+F   E  + T           CIDTWL S VSC VC+ T+    KGG G G
Subjt:  FAYRYDNKFQVDCMICLSKFVVDESQIDT-----------CIDTWLFSPVSCLVCKSTKFFSEKGGVGAG

KAE8037553.1 hypothetical protein FH972_010134 [Carpinus fangiana]6.6e-0745.68Show/hide
Query:  PSICRAPPLGVDFAYRYDNKFQVDCMICLSKFVVDESQ----------IDTCIDTWLFSPVSCLVCKSTKFFSEKGGVGAG
        P   RA P+   ++YR D K Q+DC ICLS+F   E+             TCIDTWL S V+C VC+ST+FF E  G G G
Subjt:  PSICRAPPLGVDFAYRYDNKFQVDCMICLSKFVVDESQ----------IDTCIDTWLFSPVSCLVCKSTKFFSEKGGVGAG

XP_007016041.2 PREDICTED: RING-H2 finger protein ATL57 [Theobroma cacao]4.7e-0544.29Show/hide
Query:  FAYRYDNKFQVDCMICLSKFVVDESQIDT-----------CIDTWLFSPVSCLVCKSTKFFSEKGGVGAG
        ++Y  D K+Q+DC ICLS+F   E  + T           CIDTWL S VSC VC+ T+    KGG G G
Subjt:  FAYRYDNKFQVDCMICLSKFVVDESQIDT-----------CIDTWLFSPVSCLVCKSTKFFSEKGGVGAG

XP_021278965.1 RING-H2 finger protein ATL57 [Herrania umbratica]2.1e-0545.71Show/hide
Query:  FAYRYDNKFQVDCMICLSKFVVDESQIDT-----------CIDTWLFSPVSCLVCKSTKFFSEKGGVGAG
        ++Y  D K+Q+DC ICLS+F   E  + T           CIDTWL S VSC VC+ T+ F  KGG G G
Subjt:  FAYRYDNKFQVDCMICLSKFVVDESQIDT-----------CIDTWLFSPVSCLVCKSTKFFSEKGGVGAG

XP_039004910.1 RING-H2 finger protein ATL57-like [Hibiscus syriacus]2.8e-0539.29Show/hide
Query:  LHPSICRAPPLGVDFAYRYDNKFQVDCMICLSKFVVDESQIDT-----------CIDTWLFSPVSCLVCKSTKFFSEKGGVGAG
        L P   R+ P+   ++YR + K+Q+DC ICLS+F  ++ ++ T           CIDTWL S VSC VC+ T+ F    G G+G
Subjt:  LHPSICRAPPLGVDFAYRYDNKFQVDCMICLSKFVVDESQIDT-----------CIDTWLFSPVSCLVCKSTKFFSEKGGVGAG

TrEMBL top hitse value%identityAlignment
A0A061GV29 RING/U-box superfamily protein, putative2.3e-0544.29Show/hide
Query:  FAYRYDNKFQVDCMICLSKFVVDESQIDT-----------CIDTWLFSPVSCLVCKSTKFFSEKGGVGAG
        ++Y  D K+Q+DC ICLS+F   E  + T           CIDTWL S VSC VC+ T+    KGG G G
Subjt:  FAYRYDNKFQVDCMICLSKFVVDESQIDT-----------CIDTWLFSPVSCLVCKSTKFFSEKGGVGAG

A0A2N9IUR4 RING-type domain-containing protein7.1e-0744.74Show/hide
Query:  FAYRYDNKFQVDCMICLSKFVVDESQI------------DTCIDTWLFSPVSCLVCKSTKFFSEKGGVGAGTAFGG
        ++YR D K+Q+DC ICLS+F  DE++               CIDTWL + V+C VC+ST+FF  KGG G     GG
Subjt:  FAYRYDNKFQVDCMICLSKFVVDESQI------------DTCIDTWLFSPVSCLVCKSTKFFSEKGGVGAGTAFGG

A0A660KMD1 RING-type domain-containing protein3.2e-0745.68Show/hide
Query:  PSICRAPPLGVDFAYRYDNKFQVDCMICLSKFVVDESQ----------IDTCIDTWLFSPVSCLVCKSTKFFSEKGGVGAG
        P   RA P+   ++YR D K Q+DC ICLS+F   E+             TCIDTWL S V+C VC+ST+FF E  G G G
Subjt:  PSICRAPPLGVDFAYRYDNKFQVDCMICLSKFVVDESQ----------IDTCIDTWLFSPVSCLVCKSTKFFSEKGGVGAG

A0A6A3AB45 Ring/U-Box superfamily protein, putative isoform 11.3e-0539.29Show/hide
Query:  LHPSICRAPPLGVDFAYRYDNKFQVDCMICLSKFVVDESQIDT-----------CIDTWLFSPVSCLVCKSTKFFSEKGGVGAG
        L P   R+ P+   ++YR + K+Q+DC ICLS+F  ++ ++ T           CIDTWL S VSC VC+ T+ F    G G+G
Subjt:  LHPSICRAPPLGVDFAYRYDNKFQVDCMICLSKFVVDESQIDT-----------CIDTWLFSPVSCLVCKSTKFFSEKGGVGAG

A0A6J0ZW96 RING-H2 finger protein ATL571.0e-0545.71Show/hide
Query:  FAYRYDNKFQVDCMICLSKFVVDESQIDT-----------CIDTWLFSPVSCLVCKSTKFFSEKGGVGAG
        ++Y  D K+Q+DC ICLS+F   E  + T           CIDTWL S VSC VC+ T+ F  KGG G G
Subjt:  FAYRYDNKFQVDCMICLSKFVVDESQIDT-----------CIDTWLFSPVSCLVCKSTKFFSEKGGVGAG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G27940.1 RING/U-box superfamily protein1.9e-0441.51Show/hide
Query:  DCMICLSKFVVDES-----------QIDTCIDTWLFSPVSCLVCKSTKFFSEK
        DC+ICLS F   E+            +D C+DTWL S V+C +C+S + FS+K
Subjt:  DCMICLSKFVVDES-----------QIDTCIDTWLFSPVSCLVCKSTKFFSEK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TTCCAATTTTGTAAATCTCTCATCGCTCGATATTCCCCTTTAAACCACCACCCAACAATCCTCTTCCCCTCATTCCTTCAACCTTATAACGGCCTTCGTACTCCTCGCAA
TTCTCCTCGTTTTCTTTCTCTTCACCATTTTTTCCATCTACATCCGTCGATTTGTCGAGCGCCACCTCTGGGGGTAGATTTTGCTTACCGTTACGACAACAAGTTTCAGG
TGGATTGTATGATTTGTCTGAGCAAGTTTGTGGTGGATGAGAGTCAGATAGATACGTGCATTGACACATGGCTATTTTCGCCCGTGTCTTGTCTAGTTTGCAAGTCGACG
AAATTCTTTTCGGAAAAGGGTGGCGTTGGTGCGGGAACGGCGTTTGGAGGA
mRNA sequenceShow/hide mRNA sequence
TTCCAATTTTGTAAATCTCTCATCGCTCGATATTCCCCTTTAAACCACCACCCAACAATCCTCTTCCCCTCATTCCTTCAACCTTATAACGGCCTTCGTACTCCTCGCAA
TTCTCCTCGTTTTCTTTCTCTTCACCATTTTTTCCATCTACATCCGTCGATTTGTCGAGCGCCACCTCTGGGGGTAGATTTTGCTTACCGTTACGACAACAAGTTTCAGG
TGGATTGTATGATTTGTCTGAGCAAGTTTGTGGTGGATGAGAGTCAGATAGATACGTGCATTGACACATGGCTATTTTCGCCCGTGTCTTGTCTAGTTTGCAAGTCGACG
AAATTCTTTTCGGAAAAGGGTGGCGTTGGTGCGGGAACGGCGTTTGGAGGA
Protein sequenceShow/hide protein sequence
FQFCKSLIARYSPLNHHPTILFPSFLQPYNGLRTPRNSPRFLSLHHFFHLHPSICRAPPLGVDFAYRYDNKFQVDCMICLSKFVVDESQIDTCIDTWLFSPVSCLVCKST
KFFSEKGGVGAGTAFGG