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CcUC10G193850 (gene) of Watermelon (PI 537277) v1 genome

Gene IDCcUC10G193850
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionClassical arabinogalactan protein 9
Genome locationCicolChr10:15765526..15766029
RNA-Seq ExpressionCcUC10G193850
SyntenyCcUC10G193850
Gene Ontology termsNA
InterPro domainsIPR044959 - Classical arabinogalactan protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0053440.1 classical arabinogalactan protein 9 [Cucumis melo var. makuwa]1.3e-5085.03Show/hide
Query:  MKMGFQFVMVLALFATSCMAQAPGSAPAQPPTTPAVPPPSTPPPAATPPPATPPSATPPVATPPPATPPVATPPPASTPPLSPPASPPTSPAPASPTSSP
        MKMGFQFVM LALFATSCMAQAPG+APAQPP+TPAVPPPSTPPPAA+PPPATPP ATPP ATPPPATPP A+ PP S+PP  PPASPPTSP P+SP+S P
Subjt:  MKMGFQFVMVLALFATSCMAQAPGSAPAQPPTTPAVPPPSTPPPAATPPPATPPSATPPVATPPPATPPVATPPPASTPPLSPPASPPTSPAPASPTSSP

Query:  SAPPKEGPTSSPTSSPPSPPPEGNVPMGSPGPSPPPPPPEGNGAASVSRVMMVGGAVAGALLAMVFA
        +APPKEGP S PTSSPPSPPPEGNVP  SPGPSPPPPPPEGNGAASVSR MMVGGAVAGA LAM+FA
Subjt:  SAPPKEGPTSSPTSSPPSPPPEGNVPMGSPGPSPPPPPPEGNGAASVSRVMMVGGAVAGALLAMVFA

KAG6600667.1 hypothetical protein SDJN03_05900, partial [Cucurbita argyrosperma subsp. sororia]1.1e-3873.48Show/hide
Query:  MKMGFQFVMVLALFATSCMAQAPGSAPAQPPTTPAVPPPSTPPPAATPPPATPPSA-TPPVATPPPATPPVATPPPA----STPPLSPPASPPTSPAPAS
        MKMG QF+MVLA  ATS MAQAPG+APAQPPTTPAVPPPSTPPPAA+PPPATPP A TPP ATPPPATPP ATPPPA    +TPP  PPA+PPTSPA   
Subjt:  MKMGFQFVMVLALFATSCMAQAPGSAPAQPPTTPAVPPPSTPPPAATPPPATPPSA-TPPVATPPPATPPVATPPPA----STPPLSPPASPPTSPAPAS

Query:  PTSSPSAPPKEGPTSSP---------TSSPPSPPPEGNVPMGSPGPSPPPPPPEGNGAASVSRVMMVGGAVAGALLAMVFA
        PTSSP+ PPKEGP SSP         T+SPPSPP EGNVP G+PGP+  PPPPE NGA S+SRV MVG AV+G LLAMVFA
Subjt:  PTSSPSAPPKEGPTSSP---------TSSPPSPPPEGNVPMGSPGPSPPPPPPEGNGAASVSRVMMVGGAVAGALLAMVFA

TYK14854.1 vegetative cell wall protein gp1 [Cucumis melo var. makuwa]1.3e-5085.03Show/hide
Query:  MKMGFQFVMVLALFATSCMAQAPGSAPAQPPTTPAVPPPSTPPPAATPPPATPPSATPPVATPPPATPPVATPPPASTPPLSPPASPPTSPAPASPTSSP
        MKMGFQFVM LALFATSCMAQAPG+APAQPP+TPAVPPPSTPPPAA+PPPATPP ATPP ATPPPATPP A+ PP S+PP  PPASPPTSP P+SP+S P
Subjt:  MKMGFQFVMVLALFATSCMAQAPGSAPAQPPTTPAVPPPSTPPPAATPPPATPPSATPPVATPPPATPPVATPPPASTPPLSPPASPPTSPAPASPTSSP

Query:  SAPPKEGPTSSPTSSPPSPPPEGNVPMGSPGPSPPPPPPEGNGAASVSRVMMVGGAVAGALLAMVFA
        +APPKEGP S PTSSPPSPPPEGNVP  SPGPSPPPPPPEGNGAASVSR MMVGGAVAGA LAM+FA
Subjt:  SAPPKEGPTSSPTSSPPSPPPEGNVPMGSPGPSPPPPPPEGNGAASVSRVMMVGGAVAGALLAMVFA

XP_008455676.1 PREDICTED: vegetative cell wall protein gp1 [Cucumis melo]1.4e-4984.85Show/hide
Query:  MGFQFVMVLALFATSCMAQAPGSAPAQPPTTPAVPPPSTPPPAATPPPATPPSATPPVATPPPATPPVATPPPASTPPLSPPASPPTSPAPASPTSSPSA
        MGFQFVM LALFATSCMAQAPG+APAQPP+TPAVPPPSTPPPAA+PPPATPP ATPP ATPPPATPP A+ PP S+PP  PPASPPTSP P+SP+S P+A
Subjt:  MGFQFVMVLALFATSCMAQAPGSAPAQPPTTPAVPPPSTPPPAATPPPATPPSATPPVATPPPATPPVATPPPASTPPLSPPASPPTSPAPASPTSSPSA

Query:  PPKEGPTSSPTSSPPSPPPEGNVPMGSPGPSPPPPPPEGNGAASVSRVMMVGGAVAGALLAMVFA
        PPKEGP S PTSSPPSPPPEGNVP  SPGPSPPPPPPEGNGAASVSR MMVGGAVAGA LAM+FA
Subjt:  PPKEGPTSSPTSSPPSPPPEGNVPMGSPGPSPPPPPPEGNGAASVSRVMMVGGAVAGALLAMVFA

XP_023545089.1 classical arabinogalactan protein 4-like [Cucurbita pepo subsp. pepo]1.2e-3773.45Show/hide
Query:  MGFQFVMVLALFATSCMAQAPGSAPAQPPTTPAVPPPSTPPPAATPPPAT-PPSATPPVATPPPATPPVATPPPA--------STPPLSPPASPPTSPAP
        MG QF+M+LA  ATS MAQAPG+APAQPPTTPAVPPPSTPPPAA+PPPAT PP+ATPP ATPPPATPP ATPPPA        S+PP  PPA+PPTSPA 
Subjt:  MGFQFVMVLALFATSCMAQAPGSAPAQPPTTPAVPPPSTPPPAATPPPAT-PPSATPPVATPPPATPPVATPPPA--------STPPLSPPASPPTSPAP

Query:  ASPTSSPSAPPKEGPTSSP---TSSPPSPPPEGNVPMGSPGPSPPPPPPEGNGAASVSRVMMVGGAVAGALLAMVFA
          PTSSP+ PPKEGP SSP   T+SPPSPP EGNVP G+PGP+  PPPPE NGA S+SRV MVG AV+G LLAMVFA
Subjt:  ASPTSSPSAPPKEGPTSSP---TSSPPSPPPEGNVPMGSPGPSPPPPPPEGNGAASVSRVMMVGGAVAGALLAMVFA

TrEMBL top hitse value%identityAlignment
A0A0A0L0L1 Uncharacterized protein4.7e-5185.63Show/hide
Query:  MKMGFQFVMVLALFATSCMAQAPGSAPAQPPTTPAVPPPSTPPPAATPPPATPPSATPPVATPPPATPPVATPPPASTPPLSPPASPPTSPAPASPTSSP
        MKMGFQFVM LALFATSCMAQAPG+APAQPP+TPAVPPPSTPPPAA+PPPATPP ATPP ATPPPATPP A+ PP S+PP  PPASPPTSP P+SP+S P
Subjt:  MKMGFQFVMVLALFATSCMAQAPGSAPAQPPTTPAVPPPSTPPPAATPPPATPPSATPPVATPPPATPPVATPPPASTPPLSPPASPPTSPAPASPTSSP

Query:  SAPPKEGPTSSPTSSPPSPPPEGNVPMGSPGPSPPPPPPEGNGAASVSRVMMVGGAVAGALLAMVFA
        +APPKEGP S PTSSPPSPPPEGNVP  SPGPSPPPPPPEGNGAASVSR MMVGGAVAGA LAMVFA
Subjt:  SAPPKEGPTSSPTSSPPSPPPEGNVPMGSPGPSPPPPPPEGNGAASVSRVMMVGGAVAGALLAMVFA

A0A1S3C1K1 vegetative cell wall protein gp16.8e-5084.85Show/hide
Query:  MGFQFVMVLALFATSCMAQAPGSAPAQPPTTPAVPPPSTPPPAATPPPATPPSATPPVATPPPATPPVATPPPASTPPLSPPASPPTSPAPASPTSSPSA
        MGFQFVM LALFATSCMAQAPG+APAQPP+TPAVPPPSTPPPAA+PPPATPP ATPP ATPPPATPP A+ PP S+PP  PPASPPTSP P+SP+S P+A
Subjt:  MGFQFVMVLALFATSCMAQAPGSAPAQPPTTPAVPPPSTPPPAATPPPATPPSATPPVATPPPATPPVATPPPASTPPLSPPASPPTSPAPASPTSSPSA

Query:  PPKEGPTSSPTSSPPSPPPEGNVPMGSPGPSPPPPPPEGNGAASVSRVMMVGGAVAGALLAMVFA
        PPKEGP S PTSSPPSPPPEGNVP  SPGPSPPPPPPEGNGAASVSR MMVGGAVAGA LAM+FA
Subjt:  PPKEGPTSSPTSSPPSPPPEGNVPMGSPGPSPPPPPPEGNGAASVSRVMMVGGAVAGALLAMVFA

A0A5A7UE17 Classical arabinogalactan protein 96.2e-5185.03Show/hide
Query:  MKMGFQFVMVLALFATSCMAQAPGSAPAQPPTTPAVPPPSTPPPAATPPPATPPSATPPVATPPPATPPVATPPPASTPPLSPPASPPTSPAPASPTSSP
        MKMGFQFVM LALFATSCMAQAPG+APAQPP+TPAVPPPSTPPPAA+PPPATPP ATPP ATPPPATPP A+ PP S+PP  PPASPPTSP P+SP+S P
Subjt:  MKMGFQFVMVLALFATSCMAQAPGSAPAQPPTTPAVPPPSTPPPAATPPPATPPSATPPVATPPPATPPVATPPPASTPPLSPPASPPTSPAPASPTSSP

Query:  SAPPKEGPTSSPTSSPPSPPPEGNVPMGSPGPSPPPPPPEGNGAASVSRVMMVGGAVAGALLAMVFA
        +APPKEGP S PTSSPPSPPPEGNVP  SPGPSPPPPPPEGNGAASVSR MMVGGAVAGA LAM+FA
Subjt:  SAPPKEGPTSSPTSSPPSPPPEGNVPMGSPGPSPPPPPPEGNGAASVSRVMMVGGAVAGALLAMVFA

A0A5D3CV77 Vegetative cell wall protein gp16.2e-5185.03Show/hide
Query:  MKMGFQFVMVLALFATSCMAQAPGSAPAQPPTTPAVPPPSTPPPAATPPPATPPSATPPVATPPPATPPVATPPPASTPPLSPPASPPTSPAPASPTSSP
        MKMGFQFVM LALFATSCMAQAPG+APAQPP+TPAVPPPSTPPPAA+PPPATPP ATPP ATPPPATPP A+ PP S+PP  PPASPPTSP P+SP+S P
Subjt:  MKMGFQFVMVLALFATSCMAQAPGSAPAQPPTTPAVPPPSTPPPAATPPPATPPSATPPVATPPPATPPVATPPPASTPPLSPPASPPTSPAPASPTSSP

Query:  SAPPKEGPTSSPTSSPPSPPPEGNVPMGSPGPSPPPPPPEGNGAASVSRVMMVGGAVAGALLAMVFA
        +APPKEGP S PTSSPPSPPPEGNVP  SPGPSPPPPPPEGNGAASVSR MMVGGAVAGA LAM+FA
Subjt:  SAPPKEGPTSSPTSSPPSPPPEGNVPMGSPGPSPPPPPPEGNGAASVSRVMMVGGAVAGALLAMVFA

A0A6J1J5L5 classical arabinogalactan protein 4-like2.8e-3574.12Show/hide
Query:  MKMGFQFVMVLALFATSCMAQAPGSAPAQPPTTPAVPPPSTPPPAATPPPATPPSATPPVATPPPATPPVATPPPASTPPLSPPASPPTSPAPASPTSSP
        MKMGFQFVMVLALFATS MAQAPG+APAQPPTTPAVPPPSTPPP     PATP    PP ATPPPATPP A  P    PP  PP+SPPT P PASP +SP
Subjt:  MKMGFQFVMVLALFATSCMAQAPGSAPAQPPTTPAVPPPSTPPPAATPPPATPPSATPPVATPPPATPPVATPPPASTPPLSPPASPPTSPAPASPTSSP

Query:  SAPPKEGPTSSPT---SSPPSPPPEGNVPMGSPGPSPPPPPPEGNGAASVSRVMMVGGAVAGALLAMVFA
        + PPKEGP SSPT   +SPPSPP EG VP  SPGP+ PPPPP  NGAA+VSR +MVGGAVAGALLAMVFA
Subjt:  SAPPKEGPTSSPT---SSPPSPPPEGNVPMGSPGPSPPPPPPEGNGAASVSRVMMVGGAVAGALLAMVFA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAATGGGTTTCCAATTTGTGATGGTTTTAGCCTTATTTGCCACTTCTTGTATGGCTCAGGCTCCCGGTAGCGCTCCGGCTCAGCCGCCCACCACCCCCGCTGTCCC
TCCGCCATCTACTCCTCCCCCAGCCGCCACCCCTCCTCCTGCAACCCCACCATCGGCCACCCCTCCAGTCGCAACCCCACCACCAGCCACCCCTCCAGTCGCCACCCCAC
CACCAGCTTCGACCCCACCATTATCACCGCCAGCTTCACCTCCTACATCTCCCGCCCCAGCATCACCTACATCGTCTCCGAGCGCGCCACCAAAGGAGGGTCCGACCTCA
TCTCCAACTTCATCACCGCCATCACCACCACCGGAAGGAAATGTCCCCATGGGAAGCCCGGGACCGAGCCCGCCACCACCCCCACCAGAAGGAAATGGCGCAGCCAGCGT
TAGCCGGGTAATGATGGTGGGTGGCGCAGTGGCTGGAGCTTTGTTGGCAATGGTATTTGCTTAG
mRNA sequenceShow/hide mRNA sequence
ATGAAAATGGGTTTCCAATTTGTGATGGTTTTAGCCTTATTTGCCACTTCTTGTATGGCTCAGGCTCCCGGTAGCGCTCCGGCTCAGCCGCCCACCACCCCCGCTGTCCC
TCCGCCATCTACTCCTCCCCCAGCCGCCACCCCTCCTCCTGCAACCCCACCATCGGCCACCCCTCCAGTCGCAACCCCACCACCAGCCACCCCTCCAGTCGCCACCCCAC
CACCAGCTTCGACCCCACCATTATCACCGCCAGCTTCACCTCCTACATCTCCCGCCCCAGCATCACCTACATCGTCTCCGAGCGCGCCACCAAAGGAGGGTCCGACCTCA
TCTCCAACTTCATCACCGCCATCACCACCACCGGAAGGAAATGTCCCCATGGGAAGCCCGGGACCGAGCCCGCCACCACCCCCACCAGAAGGAAATGGCGCAGCCAGCGT
TAGCCGGGTAATGATGGTGGGTGGCGCAGTGGCTGGAGCTTTGTTGGCAATGGTATTTGCTTAG
Protein sequenceShow/hide protein sequence
MKMGFQFVMVLALFATSCMAQAPGSAPAQPPTTPAVPPPSTPPPAATPPPATPPSATPPVATPPPATPPVATPPPASTPPLSPPASPPTSPAPASPTSSPSAPPKEGPTS
SPTSSPPSPPPEGNVPMGSPGPSPPPPPPEGNGAASVSRVMMVGGAVAGALLAMVFA