; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CcUC10G193870 (gene) of Watermelon (PI 537277) v1 genome

Gene IDCcUC10G193870
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionCytochrome c maturation protein CcmFc, mitochondrial
Genome locationCicolChr10:15874168..15880441
RNA-Seq ExpressionCcUC10G193870
SyntenyCcUC10G193870
Gene Ontology termsGO:0006315 - homing of group II introns (biological process)
GO:0090615 - mitochondrial mRNA processing (biological process)
GO:0005739 - mitochondrion (cellular component)
GO:0016020 - membrane (cellular component)
GO:0003964 - RNA-directed DNA polymerase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GEU58929.1 cytochrome c maturation protein CcmFc, mitochondrial [Tanacetum cinerariifolium]1.4e-0977.78Show/hide
Query:  LCRNNNNSCMEYGRISWYVHSGSPSGDDSHTILVRAGEASMGKAP
        LCR NNNSC EYGRI  Y HSGSP  DDSHTIL RAGEAS  KAP
Subjt:  LCRNNNNSCMEYGRISWYVHSGSPSGDDSHTILVRAGEASMGKAP

GFA96520.1 hypothetical protein [Tanacetum cinerariifolium]6.4e-1073.47Show/hide
Query:  RNNNNSCMEYGRISWYVHSGSPSGDDSHTILVRAGEASMGKAPYIHYSL
        R NNNSC EYGRI  Y HSGSPS +DSHTIL RAGEASM KAPY +  L
Subjt:  RNNNNSCMEYGRISWYVHSGSPSGDDSHTILVRAGEASMGKAPYIHYSL

KAG9438660.1 hypothetical protein H6P81_021403 [Aristolochia fimbriata]8.4e-1078.26Show/hide
Query:  LCRNNNNSCMEYGRISWYVHSGSPSGDDSHTILVRAGEASMGKAPY
        L R NN+SC EYGRI  Y HSGSPS DDSHTIL RAGEAS GKAPY
Subjt:  LCRNNNNSCMEYGRISWYVHSGSPSGDDSHTILVRAGEASMGKAPY

KVH87929.1 Domain X, partial [Cynara cardunculus var. scolymus]1.1e-0972.55Show/hide
Query:  LCRNNNNSCMEYGRISWYVHSGSPSGDDSHTILVRAGEASMGKAPYIHYSL
        L R NNNSC EYGRI  Y HSGSP  DDSHTILVRAGEAS  KAPY +  L
Subjt:  LCRNNNNSCMEYGRISWYVHSGSPSGDDSHTILVRAGEASMGKAPYIHYSL

PKU61784.1 putative mitochondrial protein ymf40 [Dendrobium catenatum]3.2e-0976.09Show/hide
Query:  LCRNNNNSCMEYGRISWYVHSGSPSGDDSHTILVRAGEASMGKAPY
        L R NN+SC EYGRI  Y HSGSPS D+SHTIL RAGEAS GKAPY
Subjt:  LCRNNNNSCMEYGRISWYVHSGSPSGDDSHTILVRAGEASMGKAPY

TrEMBL top hitse value%identityAlignment
A0A103XC21 Domain X (Fragment)5.3e-1072.55Show/hide
Query:  LCRNNNNSCMEYGRISWYVHSGSPSGDDSHTILVRAGEASMGKAPYIHYSL
        L R NNNSC EYGRI  Y HSGSP  DDSHTILVRAGEAS  KAPY +  L
Subjt:  LCRNNNNSCMEYGRISWYVHSGSPSGDDSHTILVRAGEASMGKAPYIHYSL

A0A2G2ZX42 Uncharacterized protein2.5e-0764.15Show/hide
Query:  LCRNNNNSCMEYGRISWYVHSGSPSGDDSHTILVRAGEASMGKAPYIHYSLLH
        + R NN+SC EYGRI  Y HSGSPS  DSHTIL RA E SM KAP IH +  H
Subjt:  LCRNNNNSCMEYGRISWYVHSGSPSGDDSHTILVRAGEASMGKAPYIHYSLLH

A0A2I0VEE5 Putative mitochondrial protein ymf401.5e-0976.09Show/hide
Query:  LCRNNNNSCMEYGRISWYVHSGSPSGDDSHTILVRAGEASMGKAPY
        L R NN+SC EYGRI  Y HSGSPS D+SHTIL RAGEAS GKAPY
Subjt:  LCRNNNNSCMEYGRISWYVHSGSPSGDDSHTILVRAGEASMGKAPY

A0A6L2LCQ2 Cytochrome c maturation protein CcmFc, mitochondrial6.9e-1077.78Show/hide
Query:  LCRNNNNSCMEYGRISWYVHSGSPSGDDSHTILVRAGEASMGKAP
        LCR NNNSC EYGRI  Y HSGSP  DDSHTIL RAGEAS  KAP
Subjt:  LCRNNNNSCMEYGRISWYVHSGSPSGDDSHTILVRAGEASMGKAP

B9S677 Uncharacterized protein4.2e-0766.67Show/hide
Query:  LCRNNNNSCMEYGRISWYVHSGSPSGDDSHTILVRAGEASMGKAPYIHYSL
        L R NNNS +EYG+I  Y HSGS S DDS TIL RA EASMGKA Y + SL
Subjt:  LCRNNNNSCMEYGRISWYVHSGSPSGDDSHTILVRAGEASMGKAPYIHYSL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CTTTGCAGGAACAACAACAATAGCTGCATGGAGTACGGTAGAATTTCCTGGTACGTTCATTCGGGAAGTCCCTCCGGGGACGACTCCCATACAATTCTTGTGAGAGCTGG
AGAAGCGTCTATGGGTAAAGCACCCTATATACATTATTCTCTACTTCATTACGATTTAAATGTTTCTGCTTCTATCTTTGTGTTTAATAGAATTGCATATTTCCTAATAA
TCTACTAA
mRNA sequenceShow/hide mRNA sequence
CTTTGCAGGAACAACAACAATAGCTGCATGGAGTACGGTAGAATTTCCTGGTACGTTCATTCGGGAAGTCCCTCCGGGGACGACTCCCATACAATTCTTGTGAGAGCTGG
AGAAGCGTCTATGGGTAAAGCACCCTATATACATTATTCTCTACTTCATTACGATTTAAATGTTTCTGCTTCTATCTTTGTGTTTAATAGAATTGCATATTTCCTAATAA
TCTACTAA
Protein sequenceShow/hide protein sequence
LCRNNNNSCMEYGRISWYVHSGSPSGDDSHTILVRAGEASMGKAPYIHYSLLHYDLNVSASIFVFNRIAYFLIIY