CuGenDBv2

Gene ID	CcUC10G193970
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	ribosome production factor 1-like
Genome location	CicolChr10:16452888..16456949
RNA-Seq Expression	CcUC10G193970
Synteny	CcUC10G193970
Gene Ontology terms	GO:0000460 - maturation of 5.8S rRNA (biological process) GO:0000470 - maturation of LSU-rRNA (biological process) GO:0005730 - nucleolus (cellular component) GO:0030687 - preribosome, large subunit precursor (cellular component) GO:0042134 - rRNA primary transcript binding (molecular function)
InterPro domains	IPR007109 - Brix domain IPR044281 - U3 snoRNP protein/Ribosome production factor 1

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_008443155.1 PREDICTED: ribosome production factor 1 isoform X1 [Cucumis melo]

4.4e-173

97.19

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Query:  MGEEKKNRGIIPSMIKNKEKRAEVHANLKNQKKLEKRKRAKARDAAEKQALELGEELPPRKIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRE
        MGEEKKN+GIIPSMIKNKEKRAEVHANLK+QKKLEKRKRAKARDAAEKQALELGEELPPRKIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKR+
Subjt:  MGEEKKNRGIIPSMIKNKEKRAEVHANLKNQKKLEKRKRAKARDAAEKQALELGEELPPRKIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRE

Query:  ILPKVLITTCRFNSTVGPAFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNPT
        ILPKVLITTCRFNST+GPAFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNPT
Subjt:  ILPKVLITTCRFNSTVGPAFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNPT

Query:  SHQPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVATFHNQRDFIFFRHHRYIFESKENKKEADLKKKSKDMKGEKVPQQKVVARLQECGPRFTMKL
         HQPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRV TFHNQRDFIFFRHHRYIFESKENKKEAD KKKSKD KGEKVPQQKV+ARLQECGPRFTMKL
Subjt:  SHQPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVATFHNQRDFIFFRHHRYIFESKENKKEADLKKKSKDMKGEKVPQQKVVARLQECGPRFTMKL

Query:  ISLQHGTFDSKGGEYEWVHK
        ISLQHGTFDSKGGEYEWVHK
Subjt:  ISLQHGTFDSKGGEYEWVHK

XP_022155906.1 ribosome production factor 1-like [Momordica charantia]

1.5e-165

93.46

Show/hide

Query:  MGEEKKN-RGIIPSMIKNKEKRAEVHANLKNQKKLEKRKRAKARDAAEKQALELGEELPPRKIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKR
        MGEEKKN R IIPSMIKNKEKR EVHANLK QKKLEKRKRAKARDA+EKQALELGEE PPR IPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKR
Subjt:  MGEEKKN-RGIIPSMIKNKEKRAEVHANLKNQKKLEKRKRAKARDAAEKQALELGEELPPRKIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKR

Query:  EILPKVLITTCRFNSTVGPAFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNP
          LPKVLITTCRFNS++GP+FISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNP
Subjt:  EILPKVLITTCRFNSTVGPAFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNP

Query:  TSHQPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVATFHNQRDFIFFRHHRYIFESKENKKEADLKKKSKDMKGEKVPQQKVVARLQECGPRFTMK
        TSH+PELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRV TFHNQRDF+FFRHHRYIF+SKENKKEAD K  SKD KGEKVPQQKV+ARLQECGPRFTMK
Subjt:  TSHQPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVATFHNQRDFIFFRHHRYIFESKENKKEADLKKKSKDMKGEKVPQQKVVARLQECGPRFTMK

Query:  LISLQHGTFDSKGGEYEWVHK
        LISLQHGTFDSKGGEYEWVHK
Subjt:  LISLQHGTFDSKGGEYEWVHK

XP_022156150.1 ribosome production factor 1-like [Momordica charantia]

1.2e-165

93.77

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Query:  MGEEKKN-RGIIPSMIKNKEKRAEVHANLKNQKKLEKRKRAKARDAAEKQALELGEELPPRKIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKR
        MGEEKKN R IIPSMIKNKEKR EVHANLK QKKLEKRKRAKARDA+EKQALELGEE PPR IPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKR
Subjt:  MGEEKKN-RGIIPSMIKNKEKRAEVHANLKNQKKLEKRKRAKARDAAEKQALELGEELPPRKIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKR

Query:  EILPKVLITTCRFNSTVGPAFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNP
          LPKVLITTCRFNST+GP+FISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNP
Subjt:  EILPKVLITTCRFNSTVGPAFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNP

Query:  TSHQPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVATFHNQRDFIFFRHHRYIFESKENKKEADLKKKSKDMKGEKVPQQKVVARLQECGPRFTMK
        TSH+PELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRV TFHNQRDFIFFRHHRYIF+SKENKKEAD K  SKD KGEKVP+QKV+ARLQECGPRFTMK
Subjt:  TSHQPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVATFHNQRDFIFFRHHRYIFESKENKKEADLKKKSKDMKGEKVPQQKVVARLQECGPRFTMK

Query:  LISLQHGTFDSKGGEYEWVHK
        LISLQHGTFDSKGGEYEWVHK
Subjt:  LISLQHGTFDSKGGEYEWVHK

XP_031737500.1 ribosome production factor 1 [Cucumis sativus]

1.0e-169

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Query:  MGEEKKNRGIIPSMIKNKEKRAEVHANLKNQKKLEKRKRAKARDAAEKQALELGEELPPRKIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRE
        MGEEKKN+ I+PS IKNKEKRAEVHANLK+QKKLEKRKRAKARDAAEKQALELGEELPPRKIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKR+
Subjt:  MGEEKKNRGIIPSMIKNKEKRAEVHANLKNQKKLEKRKRAKARDAAEKQALELGEELPPRKIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRE

Query:  ILPKVLITTCRFNSTVGPAFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNPT
        ILPK+LITTCRFNST+GPAFISELLSVIPNAHYYKRGTNDLKKI+EYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRK+IKNHGNPT
Subjt:  ILPKVLITTCRFNSTVGPAFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNPT

Query:  SHQPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVATFHNQRDFIFFRHHRYIFESKENKKEADLKKKSKDMKGEKVPQQKVVARLQECGPRFTMKL
         HQPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRV TFHNQRDFIFFRHHRYIFESKENKKEAD KKKSK  KGEKVPQQKV+ARLQECGPRFTMKL
Subjt:  SHQPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVATFHNQRDFIFFRHHRYIFESKENKKEADLKKKSKDMKGEKVPQQKVVARLQECGPRFTMKL

Query:  ISLQHGTFDSKGGEYEWVHK
        ISLQHGTFDSKGGEYEWVHK
Subjt:  ISLQHGTFDSKGGEYEWVHK

XP_038906205.1 ribosome production factor 1 [Benincasa hispida]

5.8e-173

96.88

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Query:  MGEEKKNRGIIPSMIKNKEKRAEVHANLKNQKKLEKRKRAKARDAAEKQALELGEELPPRKIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRE
        MGEE KNRGIIPSMIKNKEKRAEVHANLKNQKKLEKRKRAKARDAAEKQALELGEELPPRKIPRTIENTREVDET+CKPDDEELFAGNDADEFSSIIKRE
Subjt:  MGEEKKNRGIIPSMIKNKEKRAEVHANLKNQKKLEKRKRAKARDAAEKQALELGEELPPRKIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRE

Query:  ILPKVLITTCRFNSTVGPAFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNPT
        ILPKVLITTCRFNST+GP FISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNPT
Subjt:  ILPKVLITTCRFNSTVGPAFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNPT

Query:  SHQPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVATFHNQRDFIFFRHHRYIFESKENKKEADLKKKSKDMKGEKVPQQKVVARLQECGPRFTMKL
        SHQPELVLTNFTTRLGLR+GRLIQ+LFPQDPNFRGRRV TFHNQRDFIFFRHHRYIFESKENKKEAD KKKSKD KGEKVPQQKV+ARLQECGPRFTMKL
Subjt:  SHQPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVATFHNQRDFIFFRHHRYIFESKENKKEADLKKKSKDMKGEKVPQQKVVARLQECGPRFTMKL

Query:  ISLQHGTFDSKGGEYEWVHK
        ISLQHGTFDSKGGEYEWVHK
Subjt:  ISLQHGTFDSKGGEYEWVHK

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LH42 Brix domain-containing protein

5.0e-170

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Query:  MGEEKKNRGIIPSMIKNKEKRAEVHANLKNQKKLEKRKRAKARDAAEKQALELGEELPPRKIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRE
        MGEEKKN+ I+PS IKNKEKRAEVHANLK+QKKLEKRKRAKARDAAEKQALELGEELPPRKIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKR+
Subjt:  MGEEKKNRGIIPSMIKNKEKRAEVHANLKNQKKLEKRKRAKARDAAEKQALELGEELPPRKIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRE

Query:  ILPKVLITTCRFNSTVGPAFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNPT
        ILPK+LITTCRFNST+GPAFISELLSVIPNAHYYKRGTNDLKKI+EYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRK+IKNHGNPT
Subjt:  ILPKVLITTCRFNSTVGPAFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNPT

Query:  SHQPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVATFHNQRDFIFFRHHRYIFESKENKKEADLKKKSKDMKGEKVPQQKVVARLQECGPRFTMKL
         HQPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRV TFHNQRDFIFFRHHRYIFESKENKKEAD KKKSK  KGEKVPQQKV+ARLQECGPRFTMKL
Subjt:  SHQPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVATFHNQRDFIFFRHHRYIFESKENKKEADLKKKSKDMKGEKVPQQKVVARLQECGPRFTMKL

Query:  ISLQHGTFDSKGGEYEWVHK
        ISLQHGTFDSKGGEYEWVHK
Subjt:  ISLQHGTFDSKGGEYEWVHK

A0A1S3B854 ribosome production factor 1 isoform X1

2.2e-173

97.19

Show/hide

Query:  MGEEKKNRGIIPSMIKNKEKRAEVHANLKNQKKLEKRKRAKARDAAEKQALELGEELPPRKIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRE
        MGEEKKN+GIIPSMIKNKEKRAEVHANLK+QKKLEKRKRAKARDAAEKQALELGEELPPRKIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKR+
Subjt:  MGEEKKNRGIIPSMIKNKEKRAEVHANLKNQKKLEKRKRAKARDAAEKQALELGEELPPRKIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRE

Query:  ILPKVLITTCRFNSTVGPAFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNPT
        ILPKVLITTCRFNST+GPAFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNPT
Subjt:  ILPKVLITTCRFNSTVGPAFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNPT

Query:  SHQPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVATFHNQRDFIFFRHHRYIFESKENKKEADLKKKSKDMKGEKVPQQKVVARLQECGPRFTMKL
         HQPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRV TFHNQRDFIFFRHHRYIFESKENKKEAD KKKSKD KGEKVPQQKV+ARLQECGPRFTMKL
Subjt:  SHQPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVATFHNQRDFIFFRHHRYIFESKENKKEADLKKKSKDMKGEKVPQQKVVARLQECGPRFTMKL

Query:  ISLQHGTFDSKGGEYEWVHK
        ISLQHGTFDSKGGEYEWVHK
Subjt:  ISLQHGTFDSKGGEYEWVHK

A0A5A7UHC7 Ribosome production factor 1 isoform X1

2.2e-173

97.19

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Query:  MGEEKKNRGIIPSMIKNKEKRAEVHANLKNQKKLEKRKRAKARDAAEKQALELGEELPPRKIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRE
        MGEEKKN+GIIPSMIKNKEKRAEVHANLK+QKKLEKRKRAKARDAAEKQALELGEELPPRKIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKR+
Subjt:  MGEEKKNRGIIPSMIKNKEKRAEVHANLKNQKKLEKRKRAKARDAAEKQALELGEELPPRKIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRE

Query:  ILPKVLITTCRFNSTVGPAFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNPT
        ILPKVLITTCRFNST+GPAFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNPT
Subjt:  ILPKVLITTCRFNSTVGPAFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNPT

Query:  SHQPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVATFHNQRDFIFFRHHRYIFESKENKKEADLKKKSKDMKGEKVPQQKVVARLQECGPRFTMKL
         HQPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRV TFHNQRDFIFFRHHRYIFESKENKKEAD KKKSKD KGEKVPQQKV+ARLQECGPRFTMKL
Subjt:  SHQPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVATFHNQRDFIFFRHHRYIFESKENKKEADLKKKSKDMKGEKVPQQKVVARLQECGPRFTMKL

Query:  ISLQHGTFDSKGGEYEWVHK
        ISLQHGTFDSKGGEYEWVHK
Subjt:  ISLQHGTFDSKGGEYEWVHK

A0A6J1DPH5 ribosome production factor 1-like

5.7e-166

93.77

Show/hide

Query:  MGEEKKN-RGIIPSMIKNKEKRAEVHANLKNQKKLEKRKRAKARDAAEKQALELGEELPPRKIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKR
        MGEEKKN R IIPSMIKNKEKR EVHANLK QKKLEKRKRAKARDA+EKQALELGEE PPR IPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKR
Subjt:  MGEEKKN-RGIIPSMIKNKEKRAEVHANLKNQKKLEKRKRAKARDAAEKQALELGEELPPRKIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKR

Query:  EILPKVLITTCRFNSTVGPAFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNP
          LPKVLITTCRFNST+GP+FISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNP
Subjt:  EILPKVLITTCRFNSTVGPAFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNP

Query:  TSHQPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVATFHNQRDFIFFRHHRYIFESKENKKEADLKKKSKDMKGEKVPQQKVVARLQECGPRFTMK
        TSH+PELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRV TFHNQRDFIFFRHHRYIF+SKENKKEAD K  SKD KGEKVP+QKV+ARLQECGPRFTMK
Subjt:  TSHQPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVATFHNQRDFIFFRHHRYIFESKENKKEADLKKKSKDMKGEKVPQQKVVARLQECGPRFTMK

Query:  LISLQHGTFDSKGGEYEWVHK
        LISLQHGTFDSKGGEYEWVHK
Subjt:  LISLQHGTFDSKGGEYEWVHK

A0A6J1DT48 ribosome production factor 1-like

7.4e-166

93.46

Show/hide

Query:  MGEEKKN-RGIIPSMIKNKEKRAEVHANLKNQKKLEKRKRAKARDAAEKQALELGEELPPRKIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKR
        MGEEKKN R IIPSMIKNKEKR EVHANLK QKKLEKRKRAKARDA+EKQALELGEE PPR IPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKR
Subjt:  MGEEKKN-RGIIPSMIKNKEKRAEVHANLKNQKKLEKRKRAKARDAAEKQALELGEELPPRKIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKR

Query:  EILPKVLITTCRFNSTVGPAFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNP
          LPKVLITTCRFNS++GP+FISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNP
Subjt:  EILPKVLITTCRFNSTVGPAFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNP

Query:  TSHQPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVATFHNQRDFIFFRHHRYIFESKENKKEADLKKKSKDMKGEKVPQQKVVARLQECGPRFTMK
        TSH+PELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRV TFHNQRDF+FFRHHRYIF+SKENKKEAD K  SKD KGEKVPQQKV+ARLQECGPRFTMK
Subjt:  TSHQPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVATFHNQRDFIFFRHHRYIFESKENKKEADLKKKSKDMKGEKVPQQKVVARLQECGPRFTMK

Query:  LISLQHGTFDSKGGEYEWVHK
        LISLQHGTFDSKGGEYEWVHK
Subjt:  LISLQHGTFDSKGGEYEWVHK

SwissProt top hits

e value

%identity

Alignment

Q5R631 Ribosome production factor 1

2.4e-68

46.33

Show/hide

Query:  GIIPSMIKNKEKRAEVHANLKNQKKLEKRKRAKARDAAEKQALELGEELPPRKIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKREILPKVLIT
        G   S IKNKE+R   H      K+ +++++  A+   +K+   LG++ PP+ +P+TI+N R  DET   P+DEE+      DEF+S   ++  PK+LIT
Subjt:  GIIPSMIKNKEKRAEVHANLKNQKKLEKRKRAKARDAAEKQALELGEELPPRKIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKREILPKVLIT

Query:  TCRFNSTVGPAFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHG-NPTSHQPELV
        T             +L +VIPN+H Y R    LKKII    A+DFT L+V++  R+  +GL++  LP GPTAHFK+S+V LRK+IK  G +PT H PE++
Subjt:  TCRFNSTVGPAFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHG-NPTSHQPELV

Query:  LTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVATFHNQRDFIFFRHHRYIFESKENKKEADLKKKSKDMKGEKVPQQKVVARLQECGPRFTMKLISLQHGT
        L NFTTRLG  +GR+  SLFP +P F GR+VATFHNQRD+IFFR HRYIF S++                           +QE GPRFT+KL SLQ GT
Subjt:  LTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVATFHNQRDFIFFRHHRYIFESKENKKEADLKKKSKDMKGEKVPQQKVVARLQECGPRFTMKLISLQHGT

Query:  FDSKGGEYEWVHK
        FDSK GEYEWVHK
Subjt:  FDSKGGEYEWVHK

Q6IQU6 Ribosome production factor 1

2.4e-68

48.54

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Query:  SMIKNKEKRAEVHANLKNQKKLEKRKRAKARDAAEKQALELGEELPPRKIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKREILPKVLITTCRF
        S IKNK++R  +   LK +K+ +KR   K +   E++AL+  ++ PP+++P+TIEN R  DET   P+DEE+      DEFS+   R   PKVLITT   
Subjt:  SMIKNKEKRAEVHANLKNQKKLEKRKRAKARDAAEKQALELGEELPPRKIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKREILPKVLITTCRF

Query:  NSTVGPAFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHG-NPTSHQPELVLTNF
               F  +L +VIP+A+ Y R    LKK+I    ++ FT LMV++  R+  +G+++  LP+GPTAHFK+S+V LRK++K  G NPT H PE++L NF
Subjt:  NSTVGPAFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHG-NPTSHQPELVLTNF

Query:  TTRLGLRVGRLIQSLFPQDPNFRGRRVATFHNQRDFIFFRHHRYIFESKENKKEADLKKKSKDMKGEKVPQQKVVARLQECGPRFTMKLISLQHGTFDSK
        TTRLG  +GRL  +LFP DP F GR+VATFHNQRDFIFFR HRYIF  K  KK                        +QE GPRFT+KL SLQ GTFDSK
Subjt:  TTRLGLRVGRLIQSLFPQDPNFRGRRVATFHNQRDFIFFRHHRYIFESKENKKEADLKKKSKDMKGEKVPQQKVVARLQECGPRFTMKLISLQHGTFDSK

Query:  GGEYEWVHK
         GEYEWVHK
Subjt:  GGEYEWVHK

Q7TND5 Ribosome production factor 1

5.3e-68

46.01

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Query:  GIIPSMIKNKEKRAEVHANLKNQKKLEKRKRAKARDAAEKQALELGEELPPRKIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKREILPKVLIT
        G   S IKNK++R   H      K+ +++++  A+   +K+   LG++ PP+ +P+TI+N R  DET   P+DEE+      DEF+S   R+  PK+LIT
Subjt:  GIIPSMIKNKEKRAEVHANLKNQKKLEKRKRAKARDAAEKQALELGEELPPRKIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKREILPKVLIT

Query:  TCRFNSTVGPAFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHG-NPTSHQPELV
        T             +L +VIP++H Y R    LKKII    A+DFT L+V++  R+  +GL++  LP GPTAHFK+S+V LRK+IK  G +PT H PE++
Subjt:  TCRFNSTVGPAFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHG-NPTSHQPELV

Query:  LTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVATFHNQRDFIFFRHHRYIFESKENKKEADLKKKSKDMKGEKVPQQKVVARLQECGPRFTMKLISLQHGT
        L NFTTRLG  +GR+  SLFP +P F GR+VATFHNQRD+IFFR HRYIF+S++                           +QE GPRFT+KL SLQ GT
Subjt:  LTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVATFHNQRDFIFFRHHRYIFESKENKKEADLKKKSKDMKGEKVPQQKVVARLQECGPRFTMKLISLQHGT

Query:  FDSKGGEYEWVHK
        FDSK GEYEWVHK
Subjt:  FDSKGGEYEWVHK

Q8AVP1 Ribosome production factor 1

9.6e-70

46.96

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Query:  SMIKNKEKRAEVHANLKNQKKLEK----RKRAKARDAAEKQALELGEELPPRKIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKREILPKVLIT
        S IKNK++R  +   LK +K+ EK    +KR K R+A       LG++ PP+ +P+TIEN R  DET   P DEE+      DEF+    ++  PK+LIT
Subjt:  SMIKNKEKRAEVHANLKNQKKLEK----RKRAKARDAAEKQALELGEELPPRKIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKREILPKVLIT

Query:  TCRFNSTVGPAFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHG-NPTSHQPELV
        T          F  +L S+IPN+  Y R    LKKII    ++D+T L+V++  R+  +GL++  LP+GPTAHFKISNV LRK++K  G  PT H+PE++
Subjt:  TCRFNSTVGPAFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHG-NPTSHQPELV

Query:  LTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVATFHNQRDFIFFRHHRYIFESKENKKEADLKKKSKDMKGEKVPQQKVVARLQECGPRFTMKLISLQHGT
        L NFTTRLG  +GR+  SL+P DP+F GR+VATFHNQRD+IFFR+HRY+F+S++                           +QE GPRFT+KL SLQ GT
Subjt:  LTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVATFHNQRDFIFFRHHRYIFESKENKKEADLKKKSKDMKGEKVPQQKVVARLQECGPRFTMKLISLQHGT

Query:  FDSKGGEYEWVHK
        FDSK GEYEWVHK
Subjt:  FDSKGGEYEWVHK

Q9H9Y2 Ribosome production factor 1

5.3e-68

46.01

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Query:  GIIPSMIKNKEKRAEVHANLKNQKKLEKRKRAKARDAAEKQALELGEELPPRKIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKREILPKVLIT
        G   S IKNK++R   H      K+ +++++  A+   +K+   LG++ PP+ +P+TI+N R  DET   P+DEE+      DEF+S   ++  PK+LIT
Subjt:  GIIPSMIKNKEKRAEVHANLKNQKKLEKRKRAKARDAAEKQALELGEELPPRKIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKREILPKVLIT

Query:  TCRFNSTVGPAFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHG-NPTSHQPELV
        T             +L +VIPN+H Y R    LKKII    A+DFT L+V++  R+  +GL++  LP GPTAHFK+S+V LRK+IK  G +PT H PE++
Subjt:  TCRFNSTVGPAFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHG-NPTSHQPELV

Query:  LTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVATFHNQRDFIFFRHHRYIFESKENKKEADLKKKSKDMKGEKVPQQKVVARLQECGPRFTMKLISLQHGT
        L NFTTRLG  +GR+  SLFP +P F GR+VATFHNQRD+IFFR HRYIF S++                           +QE GPRFT+KL SLQ GT
Subjt:  LTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVATFHNQRDFIFFRHHRYIFESKENKKEADLKKKSKDMKGEKVPQQKVVARLQECGPRFTMKLISLQHGT

Query:  FDSKGGEYEWVHK
        FDSK GEYEWVHK
Subjt:  FDSKGGEYEWVHK

Arabidopsis top hits

e value

%identity

Alignment

AT1G63780.1 Ribosomal RNA processing Brix domain protein

1.1e-33

33.94

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Query:  KQALELGEELPPRKIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKREILPKVLITTCRFNSTVGPAFISELLSVIPNAHYYKRGTNDLKKIIEY
        ++AL+ G+ +P        +  +E+D    +  +  +   +  DE+++  + +  PK+L+TT R  S     F  EL  V PN+    RG+  + +IIE 
Subjt:  KQALELGEELPPRKIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKREILPKVLITTCRFNSTVGPAFISELLSVIPNAHYYKRGTNDLKKIIEY

Query:  ANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDI---KNHGNPTSHQPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVATFHNQ
        A + DFT +++VH  R   DGL+I  LP GPTA+F + NVV R DI   K+ G      P L+  NFTT++G RVG +++ +FP  P    +R+ TF NQ
Subjt:  ANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDI---KNHGNPTSHQPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVATFHNQ

Query:  RDFIFFRHHRYIFESKENKKEADLKKKSKDMKGEKVPQQKVVARLQECGPRFTMKLISLQHGTFDSKGGEYEWV
         D+I FR+H Y                    KGE  P+      L+E GPRF ++L  ++ GT +    E EWV
Subjt:  RDFIFFRHHRYIFESKENKKEADLKKKSKDMKGEKVPQQKVVARLQECGPRFTMKLISLQHGTFDSKGGEYEWV

AT4G01560.1 Ribosomal RNA processing Brix domain protein

3.4e-131

73.04

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Query:  GEEKKNRGIIPSMIKNKEKRAEVHANLKNQKKLEKRKRAKARDAAEKQALELGEELPPRKIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKREI
        G EK+N  I+PSMIKNK+KR++V+A  K++KKLEK+K+ +ARDAAEK+ALELGEE P + IP+TIENTRE DETVC+PDDEELFA  DADEF+ +++REI
Subjt:  GEEKKNRGIIPSMIKNKEKRAEVHANLKNQKKLEKRKRAKARDAAEKQALELGEELPPRKIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKREI

Query:  LPKVLITTCRFNSTVGPAFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNPTS
         PKVL+TTCRFNST GPA ISELLSVIPN+HY KRGT DLKKI+EYA  KDFTSL+VVHT+RR+ D LLIIGLP GPTAHFK+SN+VLRKDIKNHGNPTS
Subjt:  LPKVLITTCRFNSTVGPAFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNPTS

Query:  HQPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVATFHNQRDFIFFRHHRYIFESKENKKEADLKKKSKDMKGEKVPQQKVVARLQECGPRFTMKLI
        HQPELVL NFTTRLG RVGR  QSLFP DPNFRGRRV TFHNQRDFIFFRHHRYIFE+KE+             K +K  ++ +  RLQECGPRFT+KL+
Subjt:  HQPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVATFHNQRDFIFFRHHRYIFESKENKKEADLKKKSKDMKGEKVPQQKVVARLQECGPRFTMKLI

Query:  SLQHGTFDSKGGEYEWVHK
        +LQHGTFD+KGGE+EWVHK
Subjt:  SLQHGTFDSKGGEYEWVHK

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGGGGAGGAGAAGAAGAACAGGGGTATAATCCCATCAATGATAAAGAACAAAGAAAAGAGGGCAGAAGTGCACGCCAACCTCAAGAACCAGAAGAAGCTTGAGAAACG
CAAGAGGGCCAAGGCTCGTGATGCTGCTGAGAAGCAAGCTCTTGAACTTGGAGAAGAACTTCCTCCTAGGAAGATTCCTCGCACCATTGAGAACACCAGGGAGGTTGATG
AGACTGTTTGCAAACCTGACGATGAAGAGCTATTTGCTGGAAATGATGCTGATGAATTTAGTTCCATCATAAAGCGTGAGATTTTGCCGAAAGTTCTAATTACTACTTGT
CGTTTTAATTCTACTGTTGGACCTGCTTTTATATCAGAGTTGCTTTCGGTGATACCAAATGCACATTACTACAAGAGAGGAACTAATGATTTGAAGAAGATTATAGAATA
TGCAAATGCCAAGGACTTTACTTCTTTGATGGTTGTCCATACGAGTAGGAGAAAATTGGATGGCCTTTTAATTATTGGCTTACCTGAGGGGCCTACTGCCCATTTTAAGA
TATCAAATGTTGTCTTACGTAAGGACATTAAGAATCATGGAAATCCAACCAGTCATCAGCCAGAGCTTGTATTGACCAACTTCACAACACGCCTTGGACTTCGTGTTGGA
AGATTAATACAATCACTATTCCCACAAGATCCTAATTTTCGCGGTCGACGGGTTGCAACTTTTCATAACCAACGGGATTTTATATTTTTTCGGCATCATCGATACATTTT
TGAAAGCAAGGAAAATAAAAAAGAGGCCGACTTAAAAAAGAAGTCCAAGGATATGAAGGGTGAGAAAGTTCCTCAGCAGAAAGTAGTTGCCCGTCTTCAGGAATGTGGTC
CTCGTTTCACAATGAAATTGATCAGTTTGCAGCACGGAACTTTCGATTCAAAAGGCGGGGAGTATGAATGGGTTCATAAGGGTGGACTGCTGATCAAATTCGAATCTCCA
TTTCTGCCTACATGTATGTTAGGTCATTTAACTTTCACTATTCAAAATTTTGTAGCATTGCTATTGAGGCTGAGTTTGTTCCAGAGGTATCAATGTATTGATATTTGA

mRNA sequence

Show/hide mRNA sequence

AAAGAAAGGACACTTTTAGCTTGCAACTTAACCCCCGCCGCTAACCTCTCTTTCGCACAAGCTCTGTCCGCCGACCACACGACCGCCCCTCCGACGACCATCATCCAACT
GCCATCGTCTACAGCCTCGTCGCCGGTGAGCGTTTCCCTCGAGCTTCACGCCGCCTTTCTCTCTCTCTAGCATCTATTTCTTGCTTTCGTTTTCTCTCTGGTTTAGAGGG
ACTCCGGCCGCACGCACCGCCCCATCAGCCCGCCTCTGCCGTCTGCTGTTCGTCGCCACCCGTTCTCGCCGTCGTCCGACGCCGGTGCTACAGTTTCAGAGTCTTAGTTT
TGAGGTTGATCAAAGAGTCTAGATGGGGGAGGAGAAGAAGAACAGGGGTATAATCCCATCAATGATAAAGAACAAAGAAAAGAGGGCAGAAGTGCACGCCAACCTCAAGA
ACCAGAAGAAGCTTGAGAAACGCAAGAGGGCCAAGGCTCGTGATGCTGCTGAGAAGCAAGCTCTTGAACTTGGAGAAGAACTTCCTCCTAGGAAGATTCCTCGCACCATT
GAGAACACCAGGGAGGTTGATGAGACTGTTTGCAAACCTGACGATGAAGAGCTATTTGCTGGAAATGATGCTGATGAATTTAGTTCCATCATAAAGCGTGAGATTTTGCC
GAAAGTTCTAATTACTACTTGTCGTTTTAATTCTACTGTTGGACCTGCTTTTATATCAGAGTTGCTTTCGGTGATACCAAATGCACATTACTACAAGAGAGGAACTAATG
ATTTGAAGAAGATTATAGAATATGCAAATGCCAAGGACTTTACTTCTTTGATGGTTGTCCATACGAGTAGGAGAAAATTGGATGGCCTTTTAATTATTGGCTTACCTGAG
GGGCCTACTGCCCATTTTAAGATATCAAATGTTGTCTTACGTAAGGACATTAAGAATCATGGAAATCCAACCAGTCATCAGCCAGAGCTTGTATTGACCAACTTCACAAC
ACGCCTTGGACTTCGTGTTGGAAGATTAATACAATCACTATTCCCACAAGATCCTAATTTTCGCGGTCGACGGGTTGCAACTTTTCATAACCAACGGGATTTTATATTTT
TTCGGCATCATCGATACATTTTTGAAAGCAAGGAAAATAAAAAAGAGGCCGACTTAAAAAAGAAGTCCAAGGATATGAAGGGTGAGAAAGTTCCTCAGCAGAAAGTAGTT
GCCCGTCTTCAGGAATGTGGTCCTCGTTTCACAATGAAATTGATCAGTTTGCAGCACGGAACTTTCGATTCAAAAGGCGGGGAGTATGAATGGGTTCATAAGGGTGGACT
GCTGATCAAATTCGAATCTCCATTTCTGCCTACATGTATGTTAGGTCATTTAACTTTCACTATTCAAAATTTTGTAGCATTGCTATTGAGGCTGAGTTTGTTCCAGAGGT
ATCAATGTATTGATATTTGAAAGCATTTGGATAGAATTAATTCTAGTAGCTGACAATCCAAAAGAAA

Protein sequence

Show/hide protein sequence

MGEEKKNRGIIPSMIKNKEKRAEVHANLKNQKKLEKRKRAKARDAAEKQALELGEELPPRKIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKREILPKVLITTC
RFNSTVGPAFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNPTSHQPELVLTNFTTRLGLRVG
RLIQSLFPQDPNFRGRRVATFHNQRDFIFFRHHRYIFESKENKKEADLKKKSKDMKGEKVPQQKVVARLQECGPRFTMKLISLQHGTFDSKGGEYEWVHKGGLLIKFESP
FLPTCMLGHLTFTIQNFVALLLRLSLFQRYQCIDI

CcUC10G193970 (gene) of Watermelon (PI 537277) v1 genome