CuGenDBv2

Gene ID	CcUC10G194090
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	Protein Ycf2
Genome location	CicolChr10:16952968..16954182
RNA-Seq Expression	CcUC10G194090
Synteny	CcUC10G194090
Gene Ontology terms	GO:0009507 - chloroplast (cellular component) GO:0016020 - membrane (cellular component) GO:0000166 - nucleotide binding (molecular function)
InterPro domains	IPR008543 - Uncharacterised protein family Ycf2

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

QIT04093.1 Ycf2 protein [Luffa aegyptiaca]

1.0e-115

70.73

Show/hide

Query:  SGFLPISMNFIRPRNDTLEESFGSSNINSVSCLNLTKVPGGGGTG-------SEKRGIL-VIRYLMKPSLEWRSH-------SKR---------------
        +GFLPI MNFI PRNDTLEESFGSSNIN +  ++L  +P G            E   +L + +  + P   W S         KR               
Subjt:  SGFLPISMNFIRPRNDTLEESFGSSNINSVSCLNLTKVPGGGGTG-------SEKRGIL-VIRYLMKPSLEWRSH-------SKR---------------

Query:  ---------------------KIRKDHDWELFDRLSPRKRLNIINLNSGQLFEILVKDWICYLMFAFCEKIPIEVEGFFKQEEARSTIQSNDIEHVSHLF
                             +IRKDHDWELFDRLSPRKR NIINLNSGQLFEILVKDWICYLMFAF EKIPIEVEGFFKQ+ A STIQSNDIEHVSHLF
Subjt:  ---------------------KIRKDHDWELFDRLSPRKRLNIINLNSGQLFEILVKDWICYLMFAFCEKIPIEVEGFFKQEEARSTIQSNDIEHVSHLF

Query:  SRNKWAISLQNCAQFHMWQFRQDLFFSWGKNPHESDFLRNISRENWIWLDNVWLVNKDRFFSKVRNVLSNIQYDSIRSSFVQVMDSSQLKGSSDQSRDHF
        SRNKWAISLQNCAQFHMWQFRQDLFFSWGKNPHESDFLRNISRENWIWLDNVWLVNKDRFFSKVRNVLSNIQYDS RSSFVQV DSSQLKGSSDQSRDHF
Subjt:  SRNKWAISLQNCAQFHMWQFRQDLFFSWGKNPHESDFLRNISRENWIWLDNVWLVNKDRFFSKVRNVLSNIQYDSIRSSFVQVMDSSQLKGSSDQSRDHF

Query:  DSISNEDSKYHTLINQREIQQLKERSTL
        DSISNEDS+YHTLINQREIQQLKERS L
Subjt:  DSISNEDSKYHTLINQREIQQLKERSTL

QJS52308.1 hypothetical protein RF2 [Indofevillea khasiana]

6.0e-116

71.17

Show/hide

Query:  SGFLPISMNFIRPRNDTLEESFGSSNINSVSCLNLTKVPGGGGTG-------SEKRGIL-VIRYLMKPSLEWRSH-----SKR-----------------
        +GFLPI MNFI PRNDTLEESFGSSNIN +  ++L  +P G            E   +L + +  + P   W S       KR                 
Subjt:  SGFLPISMNFIRPRNDTLEESFGSSNINSVSCLNLTKVPGGGGTG-------SEKRGIL-VIRYLMKPSLEWRSH-----SKR-----------------

Query:  -------------------KIRKDHDWELFDRLSPRKRLNIINLNSGQLFEILVKDWICYLMFAFCEKIPIEVEGFFKQEEARSTIQSNDIEHVSHLFSR
                           +IRKDHDWELFDRLSPRKR NIINLNSGQLFEILVKDWICYLMFAF EKIPIEVEGFFKQ+ A STIQSNDIEHVSHLFSR
Subjt:  -------------------KIRKDHDWELFDRLSPRKRLNIINLNSGQLFEILVKDWICYLMFAFCEKIPIEVEGFFKQEEARSTIQSNDIEHVSHLFSR

Query:  NKWAISLQNCAQFHMWQFRQDLFFSWGKNPHESDFLRNISRENWIWLDNVWLVNKDRFFSKVRNVLSNIQYDSIRSSFVQVMDSSQLKGSSDQSRDHFDS
        NKWAISLQNCAQFHMWQFRQDLFFSWGKNPHESDFLRNISRENWIWLDNVWLVNKDRFFSKVRNVLSNIQYDS RSSFVQV DSSQLKGSSDQSRDHFDS
Subjt:  NKWAISLQNCAQFHMWQFRQDLFFSWGKNPHESDFLRNISRENWIWLDNVWLVNKDRFFSKVRNVLSNIQYDSIRSSFVQVMDSSQLKGSSDQSRDHFDS

Query:  ISNEDSKYHTLINQREIQQLKERSTL
        ISNEDS+YHTLINQREIQQLKERS L
Subjt:  ISNEDSKYHTLINQREIQQLKERSTL

YP_009751528.1 Ycf2 protein [Thladiantha dubia]

1.0e-115

70.73

Show/hide

Query:  SGFLPISMNFIRPRNDTLEESFGSSNINSVSCLNLTKVPGGGGTG-------SEKRGIL-VIRYLMKPSLEWRSH-------SKR---------------
        +GFLPI MNFI PRNDTLEESFGSSNIN +  ++L  +P G            E   +L + +  + P   W S         KR               
Subjt:  SGFLPISMNFIRPRNDTLEESFGSSNINSVSCLNLTKVPGGGGTG-------SEKRGIL-VIRYLMKPSLEWRSH-------SKR---------------

Query:  ---------------------KIRKDHDWELFDRLSPRKRLNIINLNSGQLFEILVKDWICYLMFAFCEKIPIEVEGFFKQEEARSTIQSNDIEHVSHLF
                             +IRKDHDWELFDRLSPRKR NIINLNSGQLFEILVKDWICYLMFAF EKIPIEVEGFFKQ+ A STIQSNDIEHVSHLF
Subjt:  ---------------------KIRKDHDWELFDRLSPRKRLNIINLNSGQLFEILVKDWICYLMFAFCEKIPIEVEGFFKQEEARSTIQSNDIEHVSHLF

Query:  SRNKWAISLQNCAQFHMWQFRQDLFFSWGKNPHESDFLRNISRENWIWLDNVWLVNKDRFFSKVRNVLSNIQYDSIRSSFVQVMDSSQLKGSSDQSRDHF
        SRNKWAISLQNCAQFHMWQFRQDLFFSWGKNPHESDFLRNISRENWIWLDNVWLVNKDRFFSKVRNVLSNIQYDS RSSFVQV DSSQLKGSSDQSRDHF
Subjt:  SRNKWAISLQNCAQFHMWQFRQDLFFSWGKNPHESDFLRNISRENWIWLDNVWLVNKDRFFSKVRNVLSNIQYDSIRSSFVQVMDSSQLKGSSDQSRDHF

Query:  DSISNEDSKYHTLINQREIQQLKERSTL
        DSISNEDS+YHTLINQREIQQLKERS L
Subjt:  DSISNEDSKYHTLINQREIQQLKERSTL

YP_009751865.1 Ycf2 protein [Indofevillea khasiana]

6.0e-116

71.17

Show/hide

Query:  SGFLPISMNFIRPRNDTLEESFGSSNINSVSCLNLTKVPGGGGTG-------SEKRGIL-VIRYLMKPSLEWRSH-----SKR-----------------
        +GFLPI MNFI PRNDTLEESFGSSNIN +  ++L  +P G            E   +L + +  + P   W S       KR                 
Subjt:  SGFLPISMNFIRPRNDTLEESFGSSNINSVSCLNLTKVPGGGGTG-------SEKRGIL-VIRYLMKPSLEWRSH-----SKR-----------------

Query:  -------------------KIRKDHDWELFDRLSPRKRLNIINLNSGQLFEILVKDWICYLMFAFCEKIPIEVEGFFKQEEARSTIQSNDIEHVSHLFSR
                           +IRKDHDWELFDRLSPRKR NIINLNSGQLFEILVKDWICYLMFAF EKIPIEVEGFFKQ+ A STIQSNDIEHVSHLFSR
Subjt:  -------------------KIRKDHDWELFDRLSPRKRLNIINLNSGQLFEILVKDWICYLMFAFCEKIPIEVEGFFKQEEARSTIQSNDIEHVSHLFSR

Query:  NKWAISLQNCAQFHMWQFRQDLFFSWGKNPHESDFLRNISRENWIWLDNVWLVNKDRFFSKVRNVLSNIQYDSIRSSFVQVMDSSQLKGSSDQSRDHFDS
        NKWAISLQNCAQFHMWQFRQDLFFSWGKNPHESDFLRNISRENWIWLDNVWLVNKDRFFSKVRNVLSNIQYDS RSSFVQV DSSQLKGSSDQSRDHFDS
Subjt:  NKWAISLQNCAQFHMWQFRQDLFFSWGKNPHESDFLRNISRENWIWLDNVWLVNKDRFFSKVRNVLSNIQYDSIRSSFVQVMDSSQLKGSSDQSRDHFDS

Query:  ISNEDSKYHTLINQREIQQLKERSTL
        ISNEDS+YHTLINQREIQQLKERS L
Subjt:  ISNEDSKYHTLINQREIQQLKERSTL

YP_009752033.1 Ycf2 protein [Cionosicys macranthus]

1.0e-115

70.73

Show/hide

Query:  SGFLPISMNFIRPRNDTLEESFGSSNINSVSCLNLTKVPGGGGTG-------SEKRGIL-VIRYLMKPSLEWRSH-------SKR---------------
        +GFLPI MNFI PRNDTLEESFGSSNIN +  ++L  +P G            E   +L + +  + P   W S         KR               
Subjt:  SGFLPISMNFIRPRNDTLEESFGSSNINSVSCLNLTKVPGGGGTG-------SEKRGIL-VIRYLMKPSLEWRSH-------SKR---------------

Query:  ---------------------KIRKDHDWELFDRLSPRKRLNIINLNSGQLFEILVKDWICYLMFAFCEKIPIEVEGFFKQEEARSTIQSNDIEHVSHLF
                             +IRKDHDWELFDRLSPRKR NIINLNSGQLFEILVKDWICYLMFAF EKIPIEVEGFFKQ+ A STIQSNDIEHVSHLF
Subjt:  ---------------------KIRKDHDWELFDRLSPRKRLNIINLNSGQLFEILVKDWICYLMFAFCEKIPIEVEGFFKQEEARSTIQSNDIEHVSHLF

Query:  SRNKWAISLQNCAQFHMWQFRQDLFFSWGKNPHESDFLRNISRENWIWLDNVWLVNKDRFFSKVRNVLSNIQYDSIRSSFVQVMDSSQLKGSSDQSRDHF
        SRNKWAISLQNCAQFHMWQFRQDLFFSWGKNPHESDFLRNISRENWIWLDNVWLVNKDRFFSKVRNVLSNIQYDS RSSFVQV DSSQLKGSSDQSRDHF
Subjt:  SRNKWAISLQNCAQFHMWQFRQDLFFSWGKNPHESDFLRNISRENWIWLDNVWLVNKDRFFSKVRNVLSNIQYDSIRSSFVQVMDSSQLKGSSDQSRDHF

Query:  DSISNEDSKYHTLINQREIQQLKERSTL
        DSISNEDS+YHTLINQREIQQLKERS L
Subjt:  DSISNEDSKYHTLINQREIQQLKERSTL

TrEMBL top hits

e value

%identity

Alignment

A0A2H4T233 Protein Ycf2

4.9e-116

70.73

Show/hide

Query:  SGFLPISMNFIRPRNDTLEESFGSSNINSVSCLNLTKVPGGGGTG-------SEKRGIL-VIRYLMKPSLEWRSH-------SKR---------------
        +GFLPI MNFI PRNDTLEESFGSSNIN +  ++L  +P G            E   +L + +  + P   W S         KR               
Subjt:  SGFLPISMNFIRPRNDTLEESFGSSNINSVSCLNLTKVPGGGGTG-------SEKRGIL-VIRYLMKPSLEWRSH-------SKR---------------

Query:  ---------------------KIRKDHDWELFDRLSPRKRLNIINLNSGQLFEILVKDWICYLMFAFCEKIPIEVEGFFKQEEARSTIQSNDIEHVSHLF
                             +IRKDHDWELFDRLSPRKR NIINLNSGQLFEILVKDWICYLMFAF EKIPIEVEGFFKQ+ A STIQSNDIEHVSHLF
Subjt:  ---------------------KIRKDHDWELFDRLSPRKRLNIINLNSGQLFEILVKDWICYLMFAFCEKIPIEVEGFFKQEEARSTIQSNDIEHVSHLF

Query:  SRNKWAISLQNCAQFHMWQFRQDLFFSWGKNPHESDFLRNISRENWIWLDNVWLVNKDRFFSKVRNVLSNIQYDSIRSSFVQVMDSSQLKGSSDQSRDHF
        SRNKWAISLQNCAQFHMWQFRQDLFFSWGKNPHESDFLRNISRENWIWLDNVWLVNKDRFFSKVRNVLSNIQYDS RSSFVQV DSSQLKGSSDQSRDHF
Subjt:  SRNKWAISLQNCAQFHMWQFRQDLFFSWGKNPHESDFLRNISRENWIWLDNVWLVNKDRFFSKVRNVLSNIQYDSIRSSFVQVMDSSQLKGSSDQSRDHF

Query:  DSISNEDSKYHTLINQREIQQLKERSTL
        DSISNEDS+YHTLINQREIQQLKERS L
Subjt:  DSISNEDSKYHTLINQREIQQLKERSTL

A0A6H0ERX2 Protein Ycf2

2.9e-116

71.17

Show/hide

Query:  SGFLPISMNFIRPRNDTLEESFGSSNINSVSCLNLTKVPGGGGTG-------SEKRGIL-VIRYLMKPSLEWRSH-----SKR-----------------
        +GFLPI MNFI PRNDTLEESFGSSNIN +  ++L  +P G            E   +L + +  + P   W S       KR                 
Subjt:  SGFLPISMNFIRPRNDTLEESFGSSNINSVSCLNLTKVPGGGGTG-------SEKRGIL-VIRYLMKPSLEWRSH-----SKR-----------------

Query:  -------------------KIRKDHDWELFDRLSPRKRLNIINLNSGQLFEILVKDWICYLMFAFCEKIPIEVEGFFKQEEARSTIQSNDIEHVSHLFSR
                           +IRKDHDWELFDRLSPRKR NIINLNSGQLFEILVKDWICYLMFAF EKIPIEVEGFFKQ+ A STIQSNDIEHVSHLFSR
Subjt:  -------------------KIRKDHDWELFDRLSPRKRLNIINLNSGQLFEILVKDWICYLMFAFCEKIPIEVEGFFKQEEARSTIQSNDIEHVSHLFSR

Query:  NKWAISLQNCAQFHMWQFRQDLFFSWGKNPHESDFLRNISRENWIWLDNVWLVNKDRFFSKVRNVLSNIQYDSIRSSFVQVMDSSQLKGSSDQSRDHFDS
        NKWAISLQNCAQFHMWQFRQDLFFSWGKNPHESDFLRNISRENWIWLDNVWLVNKDRFFSKVRNVLSNIQYDS RSSFVQV DSSQLKGSSDQSRDHFDS
Subjt:  NKWAISLQNCAQFHMWQFRQDLFFSWGKNPHESDFLRNISRENWIWLDNVWLVNKDRFFSKVRNVLSNIQYDSIRSSFVQVMDSSQLKGSSDQSRDHFDS

Query:  ISNEDSKYHTLINQREIQQLKERSTL
        ISNEDS+YHTLINQREIQQLKERS L
Subjt:  ISNEDSKYHTLINQREIQQLKERSTL

A0A6H0ET42 Protein Ycf2

4.9e-116

70.73

Show/hide

Query:  SGFLPISMNFIRPRNDTLEESFGSSNINSVSCLNLTKVPGGGGTG-------SEKRGIL-VIRYLMKPSLEWRSH-------SKR---------------
        +GFLPI MNFI PRNDTLEESFGSSNIN +  ++L  +P G            E   +L + +  + P   W S         KR               
Subjt:  SGFLPISMNFIRPRNDTLEESFGSSNINSVSCLNLTKVPGGGGTG-------SEKRGIL-VIRYLMKPSLEWRSH-------SKR---------------

Query:  ---------------------KIRKDHDWELFDRLSPRKRLNIINLNSGQLFEILVKDWICYLMFAFCEKIPIEVEGFFKQEEARSTIQSNDIEHVSHLF
                             +IRKDHDWELFDRLSPRKR NIINLNSGQLFEILVKDWICYLMFAF EKIPIEVEGFFKQ+ A STIQSNDIEHVSHLF
Subjt:  ---------------------KIRKDHDWELFDRLSPRKRLNIINLNSGQLFEILVKDWICYLMFAFCEKIPIEVEGFFKQEEARSTIQSNDIEHVSHLF

Query:  SRNKWAISLQNCAQFHMWQFRQDLFFSWGKNPHESDFLRNISRENWIWLDNVWLVNKDRFFSKVRNVLSNIQYDSIRSSFVQVMDSSQLKGSSDQSRDHF
        SRNKWAISLQNCAQFHMWQFRQDLFFSWGKNPHESDFLRNISRENWIWLDNVWLVNKDRFFSKVRNVLSNIQYDS RSSFVQV DSSQLKGSSDQSRDHF
Subjt:  SRNKWAISLQNCAQFHMWQFRQDLFFSWGKNPHESDFLRNISRENWIWLDNVWLVNKDRFFSKVRNVLSNIQYDSIRSSFVQVMDSSQLKGSSDQSRDHF

Query:  DSISNEDSKYHTLINQREIQQLKERSTL
        DSISNEDS+YHTLINQREIQQLKERS L
Subjt:  DSISNEDSKYHTLINQREIQQLKERSTL

A0A6M3RUH1 Protein Ycf2

4.9e-116

70.73

Show/hide

Query:  SGFLPISMNFIRPRNDTLEESFGSSNINSVSCLNLTKVPGGGGTG-------SEKRGIL-VIRYLMKPSLEWRSH-------SKR---------------
        +GFLPI MNFI PRNDTLEESFGSSNIN +  ++L  +P G            E   +L + +  + P   W S         KR               
Subjt:  SGFLPISMNFIRPRNDTLEESFGSSNINSVSCLNLTKVPGGGGTG-------SEKRGIL-VIRYLMKPSLEWRSH-------SKR---------------

Query:  ---------------------KIRKDHDWELFDRLSPRKRLNIINLNSGQLFEILVKDWICYLMFAFCEKIPIEVEGFFKQEEARSTIQSNDIEHVSHLF
                             +IRKDHDWELFDRLSPRKR NIINLNSGQLFEILVKDWICYLMFAF EKIPIEVEGFFKQ+ A STIQSNDIEHVSHLF
Subjt:  ---------------------KIRKDHDWELFDRLSPRKRLNIINLNSGQLFEILVKDWICYLMFAFCEKIPIEVEGFFKQEEARSTIQSNDIEHVSHLF

Query:  SRNKWAISLQNCAQFHMWQFRQDLFFSWGKNPHESDFLRNISRENWIWLDNVWLVNKDRFFSKVRNVLSNIQYDSIRSSFVQVMDSSQLKGSSDQSRDHF
        SRNKWAISLQNCAQFHMWQFRQDLFFSWGKNPHESDFLRNISRENWIWLDNVWLVNKDRFFSKVRNVLSNIQYDS RSSFVQV DSSQLKGSSDQSRDHF
Subjt:  SRNKWAISLQNCAQFHMWQFRQDLFFSWGKNPHESDFLRNISRENWIWLDNVWLVNKDRFFSKVRNVLSNIQYDSIRSSFVQVMDSSQLKGSSDQSRDHF

Query:  DSISNEDSKYHTLINQREIQQLKERSTL
        DSISNEDS+YHTLINQREIQQLKERS L
Subjt:  DSISNEDSKYHTLINQREIQQLKERSTL

A0A6M4SPQ2 Protein Ycf2

2.9e-116

71.17

Show/hide

Query:  SGFLPISMNFIRPRNDTLEESFGSSNINSVSCLNLTKVPGGGGTG-------SEKRGIL-VIRYLMKPSLEWRSH-----SKR-----------------
        +GFLPI MNFI PRNDTLEESFGSSNIN +  ++L  +P G            E   +L + +  + P   W S       KR                 
Subjt:  SGFLPISMNFIRPRNDTLEESFGSSNINSVSCLNLTKVPGGGGTG-------SEKRGIL-VIRYLMKPSLEWRSH-----SKR-----------------

Query:  -------------------KIRKDHDWELFDRLSPRKRLNIINLNSGQLFEILVKDWICYLMFAFCEKIPIEVEGFFKQEEARSTIQSNDIEHVSHLFSR
                           +IRKDHDWELFDRLSPRKR NIINLNSGQLFEILVKDWICYLMFAF EKIPIEVEGFFKQ+ A STIQSNDIEHVSHLFSR
Subjt:  -------------------KIRKDHDWELFDRLSPRKRLNIINLNSGQLFEILVKDWICYLMFAFCEKIPIEVEGFFKQEEARSTIQSNDIEHVSHLFSR

Query:  NKWAISLQNCAQFHMWQFRQDLFFSWGKNPHESDFLRNISRENWIWLDNVWLVNKDRFFSKVRNVLSNIQYDSIRSSFVQVMDSSQLKGSSDQSRDHFDS
        NKWAISLQNCAQFHMWQFRQDLFFSWGKNPHESDFLRNISRENWIWLDNVWLVNKDRFFSKVRNVLSNIQYDS RSSFVQV DSSQLKGSSDQSRDHFDS
Subjt:  NKWAISLQNCAQFHMWQFRQDLFFSWGKNPHESDFLRNISRENWIWLDNVWLVNKDRFFSKVRNVLSNIQYDSIRSSFVQVMDSSQLKGSSDQSRDHFDS

Query:  ISNEDSKYHTLINQREIQQLKERSTL
        ISNEDS+YHTLINQREIQQLKERS L
Subjt:  ISNEDSKYHTLINQREIQQLKERSTL

SwissProt top hits

e value

%identity

Alignment

A0ZZ78 Protein Ycf2

7.1e-112

68.29

Show/hide

Query:  SGFLPISMNFIRPRNDTLEESFGSSNINSVSCLNLTKVPGGGGTG-------SEKRGILVI--RYLM----KPSLEWRSHSKRK----------------
        +G LPI MN I PRNDTLEESFGSSNIN +  ++L  +P G            E   +L I  + +M    + S  WR+   +K                
Subjt:  SGFLPISMNFIRPRNDTLEESFGSSNINSVSCLNLTKVPGGGGTG-------SEKRGILVI--RYLM----KPSLEWRSHSKRK----------------

Query:  ----------------------IRKDHDWELFDRLSPRKRLNIINLNSGQLFEILVKDWICYLMFAFCEKIPIEVEGFFKQEEARSTIQSNDIEHVSHLF
                              IRKDHDWELFDRLSP KR NIINLNSGQLFEILVKDWICYLMFAF EKIPIEVEGFFKQ+ A STIQSNDIEHVSHLF
Subjt:  ----------------------IRKDHDWELFDRLSPRKRLNIINLNSGQLFEILVKDWICYLMFAFCEKIPIEVEGFFKQEEARSTIQSNDIEHVSHLF

Query:  SRNKWAISLQNCAQFHMWQFRQDLFFSWGKNPHESDFLRNISRENWIWLDNVWLVNKDRFFSKVRNVLSNIQYDSIRSSFVQVMDSSQLKGSSDQSRDHF
        SR KWAISLQNCAQFHMWQFRQDLF SWGKNPHESDFLRNISRENWIWLDNVWLVN+DRFFSKVRNV SNIQYDS RSSFVQV DS QLKGSSDQSRD F
Subjt:  SRNKWAISLQNCAQFHMWQFRQDLFFSWGKNPHESDFLRNISRENWIWLDNVWLVNKDRFFSKVRNVLSNIQYDSIRSSFVQVMDSSQLKGSSDQSRDHF

Query:  DSISNEDSKYHTLINQREIQQLKERSTL
        DSISNEDS+YHTLINQREIQQLKERS L
Subjt:  DSISNEDSKYHTLINQREIQQLKERSTL

B1A978 Protein Ycf2

9.9e-114

68.9

Show/hide

Query:  SGFLPISMNFIRPRNDTLEESFGSSNINSVSCLNLTKVPGGGGTG-------SEKRGIL-VIRYLMKPSLEWRSH-----------SKRK----------
        +G LPI MN I PRNDTLEESFGSSNIN +  ++L  +P G            E   +L + +  + P   W S            S RK          
Subjt:  SGFLPISMNFIRPRNDTLEESFGSSNINSVSCLNLTKVPGGGGTG-------SEKRGIL-VIRYLMKPSLEWRSH-----------SKRK----------

Query:  ----------------------IRKDHDWELFDRLSPRKRLNIINLNSGQLFEILVKDWICYLMFAFCEKIPIEVEGFFKQEEARSTIQSNDIEHVSHLF
                              IRK HDWELFDRLSP KR NIINLNSGQLFEILVKDWICYLMFAF EKIPIEVEGFFKQ+ A STIQSNDIEHVSHLF
Subjt:  ----------------------IRKDHDWELFDRLSPRKRLNIINLNSGQLFEILVKDWICYLMFAFCEKIPIEVEGFFKQEEARSTIQSNDIEHVSHLF

Query:  SRNKWAISLQNCAQFHMWQFRQDLFFSWGKNPHESDFLRNISRENWIWLDNVWLVNKDRFFSKVRNVLSNIQYDSIRSSFVQVMDSSQLKGSSDQSRDHF
        SRNKWAISLQNCAQFHMWQFRQDLF SWGKNPHESDFLRNISRENWIWLDNVWLVNKDRFFSKVRNV SNIQYDS RSSFVQV DSSQLKGSSDQ RDHF
Subjt:  SRNKWAISLQNCAQFHMWQFRQDLFFSWGKNPHESDFLRNISRENWIWLDNVWLVNKDRFFSKVRNVLSNIQYDSIRSSFVQVMDSSQLKGSSDQSRDHF

Query:  DSISNEDSKYHTLINQREIQQLKERSTL
        DSISNEDS+YHTLINQREIQQLKERS L
Subjt:  DSISNEDSKYHTLINQREIQQLKERSTL

Q09WV7 Protein Ycf2

3.4e-114

68.29

Show/hide

Query:  SGFLPISMNFIRPRNDTLEESFGSSNINSVSCLNLTKVPGGGGTG-------SEKRGIL-VIRYLMKPSLEWRSHSKRK---------------------
        +G LPI MNFI PRNDTLEESFGSSNIN +  ++L  +P G            E   +L + +  + P   W S   R                      
Subjt:  SGFLPISMNFIRPRNDTLEESFGSSNINSVSCLNLTKVPGGGGTG-------SEKRGIL-VIRYLMKPSLEWRSHSKRK---------------------

Query:  ----------------------IRKDHDWELFDRLSPRKRLNIINLNSGQLFEILVKDWICYLMFAFCEKIPIEVEGFFKQEEARSTIQSNDIEHVSHLF
                              IRKDHDWELFDRLSPRKR NIINLNSGQLFEILVKDWICYLMFAF EKIPIE EGFFKQ+ A STIQSNDIEHVSHLF
Subjt:  ----------------------IRKDHDWELFDRLSPRKRLNIINLNSGQLFEILVKDWICYLMFAFCEKIPIEVEGFFKQEEARSTIQSNDIEHVSHLF

Query:  SRNKWAISLQNCAQFHMWQFRQDLFFSWGKNPHESDFLRNISRENWIWLDNVWLVNKDRFFSKVRNVLSNIQYDSIRSSFVQVMDSSQLKGSSDQSRDHF
        SRNKWAISLQNCAQFHMWQFRQDLFFSWGKNPHESDFLRNISRENWIWLDNVWL NKDRFFSKVRNV SNIQYDS RSSFVQV D SQLKGSSD+SRDHF
Subjt:  SRNKWAISLQNCAQFHMWQFRQDLFFSWGKNPHESDFLRNISRENWIWLDNVWLVNKDRFFSKVRNVLSNIQYDSIRSSFVQVMDSSQLKGSSDQSRDHF

Query:  DSISNEDSKYHTLINQREIQQLKERSTL
        DSI NEDS+YHTLINQREIQQLKERS L
Subjt:  DSISNEDSKYHTLINQREIQQLKERSTL

Q0ZIV6 Protein Ycf2

2.2e-113

68.29

Show/hide

Query:  SGFLPISMNFIRPRNDTLEESFGSSNINSVSCLNLTKVPGGGGTG-------SEKRGIL-VIRYLMKPSLEWRSHSKRK---------------------
        +G LPI MN I PRNDTLEESFGSSNIN +  ++L  +P G            E   +L + +  + P   W S   R                      
Subjt:  SGFLPISMNFIRPRNDTLEESFGSSNINSVSCLNLTKVPGGGGTG-------SEKRGIL-VIRYLMKPSLEWRSHSKRK---------------------

Query:  ----------------------IRKDHDWELFDRLSPRKRLNIINLNSGQLFEILVKDWICYLMFAFCEKIPIEVEGFFKQEEARSTIQSNDIEHVSHLF
                              I KDHDWELFDRLSPRKR NIINLNSGQLFEILVK WICYLM AF EKIPIEVEGFFKQ+ A STIQSNDIEHVSHLF
Subjt:  ----------------------IRKDHDWELFDRLSPRKRLNIINLNSGQLFEILVKDWICYLMFAFCEKIPIEVEGFFKQEEARSTIQSNDIEHVSHLF

Query:  SRNKWAISLQNCAQFHMWQFRQDLFFSWGKNPHESDFLRNISRENWIWLDNVWLVNKDRFFSKVRNVLSNIQYDSIRSSFVQVMDSSQLKGSSDQSRDHF
        SRNKWAISLQNCAQFHMWQFRQDLF SWGKNPHESDFLRN+SRENWIWLDNVWLVNKDRFFSKVRNV SNIQYDS RSSFVQV DSSQLKGSSDQSRDHF
Subjt:  SRNKWAISLQNCAQFHMWQFRQDLFFSWGKNPHESDFLRNISRENWIWLDNVWLVNKDRFFSKVRNVLSNIQYDSIRSSFVQVMDSSQLKGSSDQSRDHF

Query:  DSISNEDSKYHTLINQREIQQLKERSTL
        DSISNEDSKYHTLINQREIQQLKERS L
Subjt:  DSISNEDSKYHTLINQREIQQLKERSTL

Q2L949 Protein Ycf2

9.2e-112

68.29

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Query:  SGFLPISMNFIRPRNDTLEESFGSSNINSVSCLNLTKVPGGGGTG-------SEKRGILVI--RYLM----KPSLEWRSHSKRK----------------
        +G LPI MN I PRNDTLEESFGSSNIN +  ++L  +P G            E   +L I  + +M    + S  WR+   +K                
Subjt:  SGFLPISMNFIRPRNDTLEESFGSSNINSVSCLNLTKVPGGGGTG-------SEKRGILVI--RYLM----KPSLEWRSHSKRK----------------

Query:  ----------------------IRKDHDWELFDRLSPRKRLNIINLNSGQLFEILVKDWICYLMFAFCEKIPIEVEGFFKQEEARSTIQSNDIEHVSHLF
                              IRKDHDWELFDRLSP KR NIINLNSGQLFEILVKDWICYLMFAF EKIPIEVEGFFKQ+ A STIQSNDIEHVSHLF
Subjt:  ----------------------IRKDHDWELFDRLSPRKRLNIINLNSGQLFEILVKDWICYLMFAFCEKIPIEVEGFFKQEEARSTIQSNDIEHVSHLF

Query:  SRNKWAISLQNCAQFHMWQFRQDLFFSWGKNPHESDFLRNISRENWIWLDNVWLVNKDRFFSKVRNVLSNIQYDSIRSSFVQVMDSSQLKGSSDQSRDHF
        SR KWAISLQNCAQFHMWQFRQDLF SWGKNPHESDFLRNISRENWIWLDNVWLVN+DRFFSKVRNV SNIQYDS RSSFVQV DS QLKGSSDQSRD F
Subjt:  SRNKWAISLQNCAQFHMWQFRQDLFFSWGKNPHESDFLRNISRENWIWLDNVWLVNKDRFFSKVRNVLSNIQYDSIRSSFVQVMDSSQLKGSSDQSRDHF

Query:  DSISNEDSKYHTLINQREIQQLKERSTL
        DSISNEDS+YHTLINQREIQQLKERS L
Subjt:  DSISNEDSKYHTLINQREIQQLKERSTL

Arabidopsis top hits

e value

%identity

Alignment

ATCG00860.1 Chloroplast Ycf2;ATPase, AAA type, core

1.6e-106

66.87

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Query:  GFLPISMNFIRPRNDTLEESFGSSNINS--VSCLNLTKVPGGGGTGSE------KRGILVIRYLMK---PSLEWRSHSKRK-------------------
        G LPI MN I PRNDT EESFGS NIN   VS L LTK    G   SE      K    V+    K   P   W S   R                    
Subjt:  GFLPISMNFIRPRNDTLEESFGSSNINS--VSCLNLTKVPGGGGTGSE------KRGILVIRYLMK---PSLEWRSHSKRK-------------------

Query:  ------------------------IRKDHDWELFDRLSPRKRLNIINLNSGQLFEILVKDWICYLMFAFCEKIPIEVEGFFKQEEARSTIQSNDIEHVSH
                                IRK HDWELFDRLSP KR NIINLNSGQLFEILVKDWICYLMFAF EKIPIEVEGF KQ+ A STIQSNDIEHVSH
Subjt:  ------------------------IRKDHDWELFDRLSPRKRLNIINLNSGQLFEILVKDWICYLMFAFCEKIPIEVEGFFKQEEARSTIQSNDIEHVSH

Query:  LFSRNKWAISLQNCAQFHMWQFRQDLFFSWGKNPHESDFLRNISRENWIWLDNVWLVNKDRFFSKVRNVLSNIQYDSIRSSFVQVMDSSQLKGSSDQSRD
        LFSRNKWAISLQNCAQFHMWQF QDLF SWGKNPHESDF R ISRENWIWLDNVWLVNKDRFFSKVRNV SNIQYDS RSSFVQV DSSQL GSSDQ  D
Subjt:  LFSRNKWAISLQNCAQFHMWQFRQDLFFSWGKNPHESDFLRNISRENWIWLDNVWLVNKDRFFSKVRNVLSNIQYDSIRSSFVQVMDSSQLKGSSDQSRD

Query:  HFDSISNEDSK--YHTLINQREIQQLKERSTL
         FDSISNEDS+  YHTLINQREIQQLKERS L
Subjt:  HFDSISNEDSK--YHTLINQREIQQLKERSTL

ATCG01280.1 Chloroplast Ycf2;ATPase, AAA type, core

1.6e-106

66.87

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Query:  GFLPISMNFIRPRNDTLEESFGSSNINS--VSCLNLTKVPGGGGTGSE------KRGILVIRYLMK---PSLEWRSHSKRK-------------------
        G LPI MN I PRNDT EESFGS NIN   VS L LTK    G   SE      K    V+    K   P   W S   R                    
Subjt:  GFLPISMNFIRPRNDTLEESFGSSNINS--VSCLNLTKVPGGGGTGSE------KRGILVIRYLMK---PSLEWRSHSKRK-------------------

Query:  ------------------------IRKDHDWELFDRLSPRKRLNIINLNSGQLFEILVKDWICYLMFAFCEKIPIEVEGFFKQEEARSTIQSNDIEHVSH
                                IRK HDWELFDRLSP KR NIINLNSGQLFEILVKDWICYLMFAF EKIPIEVEGF KQ+ A STIQSNDIEHVSH
Subjt:  ------------------------IRKDHDWELFDRLSPRKRLNIINLNSGQLFEILVKDWICYLMFAFCEKIPIEVEGFFKQEEARSTIQSNDIEHVSH

Query:  LFSRNKWAISLQNCAQFHMWQFRQDLFFSWGKNPHESDFLRNISRENWIWLDNVWLVNKDRFFSKVRNVLSNIQYDSIRSSFVQVMDSSQLKGSSDQSRD
        LFSRNKWAISLQNCAQFHMWQF QDLF SWGKNPHESDF R ISRENWIWLDNVWLVNKDRFFSKVRNV SNIQYDS RSSFVQV DSSQL GSSDQ  D
Subjt:  LFSRNKWAISLQNCAQFHMWQFRQDLFFSWGKNPHESDFLRNISRENWIWLDNVWLVNKDRFFSKVRNVLSNIQYDSIRSSFVQVMDSSQLKGSSDQSRD

Query:  HFDSISNEDSK--YHTLINQREIQQLKERSTL
         FDSISNEDS+  YHTLINQREIQQLKERS L
Subjt:  HFDSISNEDSK--YHTLINQREIQQLKERSTL

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGACCCAATTCAATTCAGTGGGATCTTTCATTCACATTTTTTTCCATCAAGAACGTTTTGTAAAACTCTTAGACTCCCGAATTTGGAGTATCTTACTTTCACCCAATT
CACAGGGTTCAACAAGCAATCGATATTTCACGATCAAGGGTGTAGTATTATTTGTAGTAGCGGGTTTCTTCCTATATCTATGAATTTCATTAGACCCAGAAATGATACAT
TGGAAGAATCTTTTGGCTCTTCCAATATCAATAGTGTATCATGCCTGAATCTAACTAAGGTTCCCGGTGGTGGAGGAACTGGATCGGAAAAAAGAGGGATTCTAGTTATA
AGATATCTAATGAAACCGTCGCTGGAATGGAGATCTCATTCAAAGAGAAAGATCCGCAAGGACCATGATTGGGAATTGTTTGATCGTCTTTCTCCGAGGAAGAGGCTAAA
CATAATCAACTTGAATTCGGGACAGCTATTCGAAATCTTAGTGAAAGACTGGATTTGTTATCTCATGTTTGCTTTTTGTGAAAAAATACCAATTGAAGTGGAGGGCTTCT
TCAAACAAGAAGAAGCTAGGTCAACTATTCAATCAAATGATATTGAGCATGTTTCCCATCTCTTCTCGAGAAACAAGTGGGCTATTTCTTTGCAAAATTGTGCTCAATTT
CATATGTGGCAATTCCGCCAAGATCTCTTCTTTAGTTGGGGGAAGAATCCGCACGAATCGGATTTTTTGAGGAACATATCGAGAGAGAATTGGATTTGGTTAGACAATGT
GTGGTTGGTAAACAAGGATCGATTTTTTAGCAAGGTACGGAATGTCTTGTCAAATATTCAATATGATTCCATAAGATCTAGTTTCGTTCAAGTAATGGATTCTAGCCAAT
TGAAAGGATCTTCTGATCAATCCAGAGATCATTTCGATTCCATTAGTAATGAGGATTCGAAATATCACACATTGATCAATCAAAGAGAGATTCAACAACTAAAAGAAAGA
TCGACTCTT

mRNA sequence

Show/hide mRNA sequence

ATTCATGGACCCAATTCAATTCAGTGGGATCTTTCATTCACATTTTTTTCCATCAAGAACGTTTTGTAAAACTCTTAGACTCCCGAATTTGGAGTATCTTACTTTCACCC
AATTCACAGGGTTCAACAAGCAATCGATATTTCACGATCAAGGGTGTAGTATTATTTGTAGTAGCGGGTTTCTTCCTATATCTATGAATTTCATTAGACCCAGAAATGAT
ACATTGGAAGAATCTTTTGGCTCTTCCAATATCAATAGTGTATCATGCCTGAATCTAACTAAGGTTCCCGGTGGTGGAGGAACTGGATCGGAAAAAAGAGGGATTCTAGT
TATAAGATATCTAATGAAACCGTCGCTGGAATGGAGATCTCATTCAAAGAGAAAGATCCGCAAGGACCATGATTGGGAATTGTTTGATCGTCTTTCTCCGAGGAAGAGGC
TAAACATAATCAACTTGAATTCGGGACAGCTATTCGAAATCTTAGTGAAAGACTGGATTTGTTATCTCATGTTTGCTTTTTGTGAAAAAATACCAATTGAAGTGGAGGGC
TTCTTCAAACAAGAAGAAGCTAGGTCAACTATTCAATCAAATGATATTGAGCATGTTTCCCATCTCTTCTCGAGAAACAAGTGGGCTATTTCTTTGCAAAATTGTGCTCA
ATTTCATATGTGGCAATTCCGCCAAGATCTCTTCTTTAGTTGGGGGAAGAATCCGCACGAATCGGATTTTTTGAGGAACATATCGAGAGAGAATTGGATTTGGTTAGACA
ATGTGTGGTTGGTAAACAAGGATCGATTTTTTAGCAAGGTACGGAATGTCTTGTCAAATATTCAATATGATTCCATAAGATCTAGTTTCGTTCAAGTAATGGATTCTAGC
CAATTGAAAGGATCTTCTGATCAATCCAGAGATCATTTCGATTCCATTAGTAATGAGGATTCGAAATATCACACATTGATCAATCAAAGAGAGATTCAACAACTAAAAGA
AAGATCGACTCTT

Protein sequence

Show/hide protein sequence

MDPIQFSGIFHSHFFPSRTFCKTLRLPNLEYLTFTQFTGFNKQSIFHDQGCSIICSSGFLPISMNFIRPRNDTLEESFGSSNINSVSCLNLTKVPGGGGTGSEKRGILVI
RYLMKPSLEWRSHSKRKIRKDHDWELFDRLSPRKRLNIINLNSGQLFEILVKDWICYLMFAFCEKIPIEVEGFFKQEEARSTIQSNDIEHVSHLFSRNKWAISLQNCAQF
HMWQFRQDLFFSWGKNPHESDFLRNISRENWIWLDNVWLVNKDRFFSKVRNVLSNIQYDSIRSSFVQVMDSSQLKGSSDQSRDHFDSISNEDSKYHTLINQREIQQLKER
STL

CcUC10G194090 (gene) of Watermelon (PI 537277) v1 genome