; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CcUC10G194410 (gene) of Watermelon (PI 537277) v1 genome

Gene IDCcUC10G194410
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
Description30S ribosomal protein S11
Genome locationCicolChr10:17665259..17667389
RNA-Seq ExpressionCcUC10G194410
SyntenyCcUC10G194410
Gene Ontology termsGO:0000028 - ribosomal small subunit assembly (biological process)
GO:0000462 - maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) (biological process)
GO:0006412 - translation (biological process)
GO:0005763 - mitochondrial small ribosomal subunit (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
GO:0048027 - mRNA 5'-UTR binding (molecular function)
GO:0070181 - small ribosomal subunit rRNA binding (molecular function)
InterPro domainsIPR001971 - Ribosomal protein S11
IPR036967 - Ribosomal protein S11 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7030891.1 putative ribosomal protein S11, mitochondrial [Cucurbita argyrosperma subsp. argyrosperma]2.5e-12379.37Show/hide
Query:  MPKLSLSHLSSLFQSSSLRHGPSFSPSRLSISPFIGSDLRSSMSSL---HRSDLTGSVQLDSRVTGCLGISQGDSANVGREIVGRGWKALGAQGSCWGLA
        M +L   HLSSLF+SSSL HG SFS  RLSISPF G+D RS MSSL   H S+++GSVQLD + +GC+ + +GDS NVGREIVGR WKALGAQG CWGLA
Subjt:  MPKLSLSHLSSLFQSSSLRHGPSFSPSRLSISPFIGSDLRSSMSSL---HRSDLTGSVQLDSRVTGCLGISQGDSANVGREIVGRGWKALGAQGSCWGLA

Query:  RSNESVSVPYSISSRCYGQYTNWPNADTGRNLKSMSFVKGILEEDGIDFTGSSRFPRPPNMEHNADIVHVKLMRNNTFITVTDYKGNTKLKASAGRLEEL
        RS+E+VSVPYS SSRCY  Y   PNADTGRN KSM+FV+GILEEDG+DF GSS+FPRPPNMEHNADIVHVKLMRNNTFITVTD KGNTKLKAS+GRLEEL
Subjt:  RSNESVSVPYSISSRCYGQYTNWPNADTGRNLKSMSFVKGILEEDGIDFTGSSRFPRPPNMEHNADIVHVKLMRNNTFITVTDYKGNTKLKASAGRLEEL

Query:  KGGPKLSRYAGQAIAEYVGRESRKLGLKSVVMRVKGFTFFKKKRQAIMSWRDGFTDSRSDRNPIVYIEDTTRRAHNGCRLPKQRRV
        KGGPKLSRYA +A AEYVGRES+KLGLKSVVMRVKGFT+FKKK+QAI+SWRDGFTDS+ D+NPIVYIEDTTRRAHNGCRLPKQRRV
Subjt:  KGGPKLSRYAGQAIAEYVGRESRKLGLKSVVMRVKGFTFFKKKRQAIMSWRDGFTDSRSDRNPIVYIEDTTRRAHNGCRLPKQRRV

XP_022942058.1 probable ribosomal protein S11, mitochondrial [Cucurbita moschata]5.0e-12479.72Show/hide
Query:  MPKLSLSHLSSLFQSSSLRHGPSFSPSRLSISPFIGSDLRSSMSSL---HRSDLTGSVQLDSRVTGCLGISQGDSANVGREIVGRGWKALGAQGSCWGLA
        M +L   HLSSLF+SSSL HG SFS SRLSISPF G+D RS MSSL   H S+++GSVQLD + +GC+ + +GDS NVGREIVGR WKALGAQG CWGLA
Subjt:  MPKLSLSHLSSLFQSSSLRHGPSFSPSRLSISPFIGSDLRSSMSSL---HRSDLTGSVQLDSRVTGCLGISQGDSANVGREIVGRGWKALGAQGSCWGLA

Query:  RSNESVSVPYSISSRCYGQYTNWPNADTGRNLKSMSFVKGILEEDGIDFTGSSRFPRPPNMEHNADIVHVKLMRNNTFITVTDYKGNTKLKASAGRLEEL
        RS+E+VSVPYS SSRCY  Y   PNADTGRN KSM+FV+GILEEDG+DF GSS+FPRPPNMEHNADIVHVKLMRNNTFITVTD KGNTKLKAS+GRLEEL
Subjt:  RSNESVSVPYSISSRCYGQYTNWPNADTGRNLKSMSFVKGILEEDGIDFTGSSRFPRPPNMEHNADIVHVKLMRNNTFITVTDYKGNTKLKASAGRLEEL

Query:  KGGPKLSRYAGQAIAEYVGRESRKLGLKSVVMRVKGFTFFKKKRQAIMSWRDGFTDSRSDRNPIVYIEDTTRRAHNGCRLPKQRRV
        KGGPKLSRYA +A AEYVGRES+KLGLKSVVMRVKGFT+FKKK+QAI+SWRDGFTDS+ D+NPIVYIEDTTRRAHNGCRLPKQRRV
Subjt:  KGGPKLSRYAGQAIAEYVGRESRKLGLKSVVMRVKGFTFFKKKRQAIMSWRDGFTDSRSDRNPIVYIEDTTRRAHNGCRLPKQRRV

XP_022999735.1 probable ribosomal protein S11, mitochondrial [Cucurbita maxima]1.0e-12481.12Show/hide
Query:  MPKLSLSHLSSLFQSSSLRHGPSFSPSRLSISPFIGSDLRSSMSSLHR---SDLTGSVQLDSRVTGCLGISQGDSANVGREIVGRGWKALGAQGSCWGLA
        M +L L HLSSLF+SSSL HG SFS SR+SISPF G+D RS M SLH    SDL+GSVQLD + +GC+ + +GDS NVGREIVGR WKALGAQG CWGLA
Subjt:  MPKLSLSHLSSLFQSSSLRHGPSFSPSRLSISPFIGSDLRSSMSSLHR---SDLTGSVQLDSRVTGCLGISQGDSANVGREIVGRGWKALGAQGSCWGLA

Query:  RSNESVSVPYSISSRCYGQYTNWPNADTGRNLKSMSFVKGILEEDGIDFTGSSRFPRPPNMEHNADIVHVKLMRNNTFITVTDYKGNTKLKASAGRLEEL
        RS+E+VSVPYS SSRCY  Y   PNADTGRN KSM+FV+GILEEDG++F GSS+FPRPPNMEHNADIVHVKLMRNNTFITVTD KGNTKLKASAGRLEEL
Subjt:  RSNESVSVPYSISSRCYGQYTNWPNADTGRNLKSMSFVKGILEEDGIDFTGSSRFPRPPNMEHNADIVHVKLMRNNTFITVTDYKGNTKLKASAGRLEEL

Query:  KGGPKLSRYAGQAIAEYVGRESRKLGLKSVVMRVKGFTFFKKKRQAIMSWRDGFTDSRSDRNPIVYIEDTTRRAHNGCRLPKQRRV
        KGGPKLSRYA +A AEYVGRESRKLGLKSVVMRVKGFT+FKKK+QAI+SWRDGFTDSRSD+NPIVYIEDTTRRAHNGCRLPKQRRV
Subjt:  KGGPKLSRYAGQAIAEYVGRESRKLGLKSVVMRVKGFTFFKKKRQAIMSWRDGFTDSRSDRNPIVYIEDTTRRAHNGCRLPKQRRV

XP_023526167.1 probable ribosomal protein S11, mitochondrial [Cucurbita pepo subsp. pepo]3.1e-12178.67Show/hide
Query:  MPKLSLSHLSSLFQSSSLRHGPSFSPSRLSISPFIGSDLRSSMSSLH---RSDLTGSVQLDSRVTGCLGISQGDSANVGREIVGRGWKALGAQGSCWGLA
        M +L L HLSSLF+SSSL HG SFS SRLSISPF G+D RS MSSLH    S+++GSVQ+D + +GC+ + +GDS NVGREIVGR  K LGAQG CWGLA
Subjt:  MPKLSLSHLSSLFQSSSLRHGPSFSPSRLSISPFIGSDLRSSMSSLH---RSDLTGSVQLDSRVTGCLGISQGDSANVGREIVGRGWKALGAQGSCWGLA

Query:  RSNESVSVPYSISSRCYGQYTNWPNADTGRNLKSMSFVKGILEEDGIDFTGSSRFPRPPNMEHNADIVHVKLMRNNTFITVTDYKGNTKLKASAGRLEEL
        RS+E+VSVPYS SSRCY  Y   PNADTGRN KSM+FV+GILEED +DF GSS+FPRPPNMEHNADIVHVKLMRNNTFITVTD KGNTKLKAS+GRLEEL
Subjt:  RSNESVSVPYSISSRCYGQYTNWPNADTGRNLKSMSFVKGILEEDGIDFTGSSRFPRPPNMEHNADIVHVKLMRNNTFITVTDYKGNTKLKASAGRLEEL

Query:  KGGPKLSRYAGQAIAEYVGRESRKLGLKSVVMRVKGFTFFKKKRQAIMSWRDGFTDSRSDRNPIVYIEDTTRRAHNGCRLPKQRRV
        KGGPKLSRYA +A AEYVGRES+KLGLKSVVMRVKGFT+FKKK+QAI+SWRDGFTDS+ D+NPIVYIEDTTRRAHNGCRLPKQRRV
Subjt:  KGGPKLSRYAGQAIAEYVGRESRKLGLKSVVMRVKGFTFFKKKRQAIMSWRDGFTDSRSDRNPIVYIEDTTRRAHNGCRLPKQRRV

XP_038903066.1 probable ribosomal protein S11, mitochondrial [Benincasa hispida]2.1e-13084.81Show/hide
Query:  MPKLSLSHLSSLFQSSSLRHGPSFSPSRLSISPFIGSDLRSSMSSLHRSDLTGSVQLDSRVTGCLGISQGDSANVGREIVGRGWKALGAQGSCWGLARSN
        MPKLSLSHL SLF+SSSLRHGPSFSPSRLSISPFIGSD RSSMSS+HRSDLTGS++LD++++GCL +SQGDSANVGREIVGRGWK+ GAQGSCW L RS+
Subjt:  MPKLSLSHLSSLFQSSSLRHGPSFSPSRLSISPFIGSDLRSSMSSLHRSDLTGSVQLDSRVTGCLGISQGDSANVGREIVGRGWKALGAQGSCWGLARSN

Query:  ESVSVPYSISSRCYGQYTNWPNADTGRNLKSMSFVKGILEEDGIDFTGSSRFPRPPNMEHNADIVHVKLMRNNTFITVTDYKGNTKLKASAGRLEELKGG
        E VSV +S S RCYGQY N PNADTGRNL SMSFV+  LEE G  FTGSSRF R PNMEHNADIVHVKL+RNNTFITVTD KGNTKLKASAGRLEELKGG
Subjt:  ESVSVPYSISSRCYGQYTNWPNADTGRNLKSMSFVKGILEEDGIDFTGSSRFPRPPNMEHNADIVHVKLMRNNTFITVTDYKGNTKLKASAGRLEELKGG

Query:  PKLSRYAGQAIAEYVGRESRKLGLKSVVMRVKGFTFFKKKRQAIMSWRDGFTDSRSDRNPIVYIEDTTRRAHNGCRLPKQRRV
        PKLSRYA +A+AEYVGRESRKLGLKSVVMRVKGFT FK+KRQAI+SWR GFTDSRSD+NPIVYIEDTTRRAHNGCRLPKQRRV
Subjt:  PKLSRYAGQAIAEYVGRESRKLGLKSVVMRVKGFTFFKKKRQAIMSWRDGFTDSRSDRNPIVYIEDTTRRAHNGCRLPKQRRV

TrEMBL top hitse value%identityAlignment
A0A0A0KVQ8 Uncharacterized protein5.1e-11477.11Show/hide
Query:  MPKLSLSHLSSLFQSSSLRHGPSFSPSRLSISPFIGSDLRSSMSSLHRSDLTGSVQLDSRVTGCLGISQGDSANVGREIVGRGWKALGAQGSCWGLARSN
        MPKLSLSHLSSLF+SSSL   PSFSPSRLSISPFIGSD  S MSSLHRSDLTGS+Q  ++ +GCL     DSANVGREIVGRGWK++G QG   GLAR +
Subjt:  MPKLSLSHLSSLFQSSSLRHGPSFSPSRLSISPFIGSDLRSSMSSLHRSDLTGSVQLDSRVTGCLGISQGDSANVGREIVGRGWKALGAQGSCWGLARSN

Query:  ESVSVPYSISSRCYGQYTNWPN-ADTGRNLKSMSFVKGILEEDGIDFTGSSRFPRPPNMEHNADIVHVKLMRNNTFITVTDYKGNTKLKASAGRLEELKG
        E VS+PYSISSRCYG+Y N PN  DTGRNLK M+FV+GILEE+   F G+ +F RP NMEHNADIVH+KLMRNN+F+TVTD KGNTKLKASAGRLE   G
Subjt:  ESVSVPYSISSRCYGQYTNWPN-ADTGRNLKSMSFVKGILEEDGIDFTGSSRFPRPPNMEHNADIVHVKLMRNNTFITVTDYKGNTKLKASAGRLEELKG

Query:  GPKLSRYAGQAIAEYVGRESRKLGLKSVVMRVKGFTFFKKKRQAIMSWRDGFTDSRSDRNPIVYIEDTTRRAHNGCRLPKQRRV
        G KLSRY+  +IAEYVGRESRKLGLKSVVMRVKGFTFFKKK+QAI+SWRDGFTDSR+D+NPIVY+EDTTRRAHNGCRLPK+RRV
Subjt:  GPKLSRYAGQAIAEYVGRESRKLGLKSVVMRVKGFTFFKKKRQAIMSWRDGFTDSRSDRNPIVYIEDTTRRAHNGCRLPKQRRV

A0A5A7TPI6 Putative ribosomal protein S115.8e-11075.79Show/hide
Query:  MPKLSLSHLSSLFQSSSLRHGPSFSPSRLSISPFIGSDLRSSMSSLHRSDLTGSVQLDSRVTGCLGISQGDSANVGREIVGRGWKALGAQGSCWGLARSN
        MPKLSLSHLS LF+SSSL   PSFSPSRLSISPFIGSD  S  SS   S LTGS+Q  +  +G          +VGREIVGRGWKA+G QG  WGLARS 
Subjt:  MPKLSLSHLSSLFQSSSLRHGPSFSPSRLSISPFIGSDLRSSMSSLHRSDLTGSVQLDSRVTGCLGISQGDSANVGREIVGRGWKALGAQGSCWGLARSN

Query:  ESVSVPYSISSRCYGQYTNWPN-ADTGRNLKSMSFVKGILEEDGIDFTGSSRFPRPPNMEHNADIVHVKLMRNNTFITVTDYKGNTKLKASAGRLEELK-
        ESVSVPYSISSRCYG+Y N PN  DTGRNLK+++FV+GILEED   F+   ++ RP NMEHNADIVH+KLMRNN F+TVTD KGNTKLKASAGRLEELK 
Subjt:  ESVSVPYSISSRCYGQYTNWPN-ADTGRNLKSMSFVKGILEEDGIDFTGSSRFPRPPNMEHNADIVHVKLMRNNTFITVTDYKGNTKLKASAGRLEELK-

Query:  GGPKLSRYAGQAIAEYVGRESRKLGLKSVVMRVKGFTFFKKKRQAIMSWRDGFTDSRSDRNPIVYIEDTTRRAHNGCRLPKQRRV
        GG KLSRY+G +IAEYVGRESRKLGLKSVVMRVKGFTFFKKK+QAI+SWRDGFTDSRSD+NPIVYIEDTTRRAHNGCRLPK+RRV
Subjt:  GGPKLSRYAGQAIAEYVGRESRKLGLKSVVMRVKGFTFFKKKRQAIMSWRDGFTDSRSDRNPIVYIEDTTRRAHNGCRLPKQRRV

A0A6J1CJJ5 probable ribosomal protein S11, mitochondrial7.1e-11678.67Show/hide
Query:  MPKLSLSHLSSLFQSSSLRHGPSFSPSRLSISPFIGSDLRSSMSSL--HRSDLTGSVQLDSRVTGCLGISQGDSANVGREI-VGRGWKALGAQGSCWGLA
        M +L LSHLSSLF+SSSL HG S SP R SIS F GSD RS M+SL  HRSDLTGSVQLD++V+GCL + QGDS +VGR+I VGR WKALG  G      
Subjt:  MPKLSLSHLSSLFQSSSLRHGPSFSPSRLSISPFIGSDLRSSMSSL--HRSDLTGSVQLDSRVTGCLGISQGDSANVGREI-VGRGWKALGAQGSCWGLA

Query:  RSNESVSVPYSISSRCYGQYTNWPNADTGRNLKSMSFVKGILEEDGIDFTGSSRFPRPPNMEHNADIVHVKLMRNNTFITVTDYKGNTKLKASAGRLEEL
        RS E+VSVPY+++S+CY  Y +  NADTGRN KSM+FV+GILEEDG DF   S FPRPPNME NADIVHVKLMRNNTFITVTD KGNTKLKASAGRLEEL
Subjt:  RSNESVSVPYSISSRCYGQYTNWPNADTGRNLKSMSFVKGILEEDGIDFTGSSRFPRPPNMEHNADIVHVKLMRNNTFITVTDYKGNTKLKASAGRLEEL

Query:  KGGPKLSRYAGQAIAEYVGRESRKLGLKSVVMRVKGFTFFKKKRQAIMSWRDGFTDSRSDRNPIVYIEDTTRRAHNGCRLPKQRRV
        KGGPKLSRYA +AIAEYVGRESRKLGLKSVVMRVKGFT+FKKKRQAIMSWRDGFTDSRSD+NPIVYIEDTTRRAHNGCRLPKQRRV
Subjt:  KGGPKLSRYAGQAIAEYVGRESRKLGLKSVVMRVKGFTFFKKKRQAIMSWRDGFTDSRSDRNPIVYIEDTTRRAHNGCRLPKQRRV

A0A6J1FTT5 probable ribosomal protein S11, mitochondrial2.4e-12479.72Show/hide
Query:  MPKLSLSHLSSLFQSSSLRHGPSFSPSRLSISPFIGSDLRSSMSSL---HRSDLTGSVQLDSRVTGCLGISQGDSANVGREIVGRGWKALGAQGSCWGLA
        M +L   HLSSLF+SSSL HG SFS SRLSISPF G+D RS MSSL   H S+++GSVQLD + +GC+ + +GDS NVGREIVGR WKALGAQG CWGLA
Subjt:  MPKLSLSHLSSLFQSSSLRHGPSFSPSRLSISPFIGSDLRSSMSSL---HRSDLTGSVQLDSRVTGCLGISQGDSANVGREIVGRGWKALGAQGSCWGLA

Query:  RSNESVSVPYSISSRCYGQYTNWPNADTGRNLKSMSFVKGILEEDGIDFTGSSRFPRPPNMEHNADIVHVKLMRNNTFITVTDYKGNTKLKASAGRLEEL
        RS+E+VSVPYS SSRCY  Y   PNADTGRN KSM+FV+GILEEDG+DF GSS+FPRPPNMEHNADIVHVKLMRNNTFITVTD KGNTKLKAS+GRLEEL
Subjt:  RSNESVSVPYSISSRCYGQYTNWPNADTGRNLKSMSFVKGILEEDGIDFTGSSRFPRPPNMEHNADIVHVKLMRNNTFITVTDYKGNTKLKASAGRLEEL

Query:  KGGPKLSRYAGQAIAEYVGRESRKLGLKSVVMRVKGFTFFKKKRQAIMSWRDGFTDSRSDRNPIVYIEDTTRRAHNGCRLPKQRRV
        KGGPKLSRYA +A AEYVGRES+KLGLKSVVMRVKGFT+FKKK+QAI+SWRDGFTDS+ D+NPIVYIEDTTRRAHNGCRLPKQRRV
Subjt:  KGGPKLSRYAGQAIAEYVGRESRKLGLKSVVMRVKGFTFFKKKRQAIMSWRDGFTDSRSDRNPIVYIEDTTRRAHNGCRLPKQRRV

A0A6J1KGF8 probable ribosomal protein S11, mitochondrial4.9e-12581.12Show/hide
Query:  MPKLSLSHLSSLFQSSSLRHGPSFSPSRLSISPFIGSDLRSSMSSLHR---SDLTGSVQLDSRVTGCLGISQGDSANVGREIVGRGWKALGAQGSCWGLA
        M +L L HLSSLF+SSSL HG SFS SR+SISPF G+D RS M SLH    SDL+GSVQLD + +GC+ + +GDS NVGREIVGR WKALGAQG CWGLA
Subjt:  MPKLSLSHLSSLFQSSSLRHGPSFSPSRLSISPFIGSDLRSSMSSLHR---SDLTGSVQLDSRVTGCLGISQGDSANVGREIVGRGWKALGAQGSCWGLA

Query:  RSNESVSVPYSISSRCYGQYTNWPNADTGRNLKSMSFVKGILEEDGIDFTGSSRFPRPPNMEHNADIVHVKLMRNNTFITVTDYKGNTKLKASAGRLEEL
        RS+E+VSVPYS SSRCY  Y   PNADTGRN KSM+FV+GILEEDG++F GSS+FPRPPNMEHNADIVHVKLMRNNTFITVTD KGNTKLKASAGRLEEL
Subjt:  RSNESVSVPYSISSRCYGQYTNWPNADTGRNLKSMSFVKGILEEDGIDFTGSSRFPRPPNMEHNADIVHVKLMRNNTFITVTDYKGNTKLKASAGRLEEL

Query:  KGGPKLSRYAGQAIAEYVGRESRKLGLKSVVMRVKGFTFFKKKRQAIMSWRDGFTDSRSDRNPIVYIEDTTRRAHNGCRLPKQRRV
        KGGPKLSRYA +A AEYVGRESRKLGLKSVVMRVKGFT+FKKK+QAI+SWRDGFTDSRSD+NPIVYIEDTTRRAHNGCRLPKQRRV
Subjt:  KGGPKLSRYAGQAIAEYVGRESRKLGLKSVVMRVKGFTFFKKKRQAIMSWRDGFTDSRSDRNPIVYIEDTTRRAHNGCRLPKQRRV

SwissProt top hitse value%identityAlignment
A5D5E6 30S ribosomal protein S111.7e-1039.17Show/hide
Query:  IVHVKLMRNNTFITVTDYKGNTKLKASAGRLEELKGGPKLSRYAGQAIAEYVGRESRKLGLKSVVMRVKGFTFFKKKRQAIMSWRDGFTDSRSDRNPIVY
        + H+K   NNT +T+TD KGNT   +SAG++   KG  K + +A Q  AE   RE+ + GLK V + VKG      +  AI S +    +       +  
Subjt:  IVHVKLMRNNTFITVTDYKGNTKLKASAGRLEELKGGPKLSRYAGQAIAEYVGRESRKLGLKSVVMRVKGFTFFKKKRQAIMSWRDGFTDSRSDRNPIVY

Query:  IEDTTRRAHNGCRLPKQRRV
        I+D T   HNGCR PK+RRV
Subjt:  IEDTTRRAHNGCRLPKQRRV

P26870 Ribosomal protein S11, mitochondrial9.2e-1237.01Show/hide
Query:  NMEHNADIVHVKLMRNNTFITVTDYKGNTKLKASAGRLEELKGGPKLSRYAGQAIAEYVGRESRKLGLKSVVMRVKGFTFFKKKRQAIMSWRDGFTDSRS
        NM+    I +++    NT IT+TDY GNTK  +S+G +   KG  + + YA QA AE   R + +LG K V +R+KG  + K+               + 
Subjt:  NMEHNADIVHVKLMRNNTFITVTDYKGNTKLKASAGRLEELKGGPKLSRYAGQAIAEYVGRESRKLGLKSVVMRVKGFTFFKKKRQAIMSWRDGFTDSRS

Query:  DRNPIVYIEDTTRRAHNGCRLPKQRRV
            I  I D T   HNGCR PK+RRV
Subjt:  DRNPIVYIEDTTRRAHNGCRLPKQRRV

P46746 Ribosomal protein S11, mitochondrial2.1e-1134.92Show/hide
Query:  MEHNADIVHVKLMRNNTFITVTDYKGNTKLKASAGRLEELKGGPKLSRYAGQAIAEYVGRESRKLGLKSVVMRVKGFTFFKKKRQAIMSWRDGFTDSRSD
        +E  + IVH++   NNT IT+TD +GNT+   SAG L   K   K + YA  A AE +  ++   G +++++++KG  + KK               +  
Subjt:  MEHNADIVHVKLMRNNTFITVTDYKGNTKLKASAGRLEELKGGPKLSRYAGQAIAEYVGRESRKLGLKSVVMRVKGFTFFKKKRQAIMSWRDGFTDSRSD

Query:  RNPIVYIEDTTRRAHNGCRLPKQRRV
           I  I++ T  AHNGCR PK+RRV
Subjt:  RNPIVYIEDTTRRAHNGCRLPKQRRV

Q0BYD7 30S ribosomal protein S111.3e-1034.81Show/hide
Query:  SSRFPRPPNMEHNADIVHVKLMRNNTFITVTDYKGNTKLKASAGRLEELKGGPKLSRYAGQAIAEYVGRESRKLGLKSVVMRVKGFTFFKKKRQAIMSWR
        ++R  R       + IVHV    NNT +T+TD +GNT   +S+G +   KG  K + YA Q  AE   +++++ GL++V +RV+G    ++     +   
Subjt:  SSRFPRPPNMEHNADIVHVKLMRNNTFITVTDYKGNTKLKASAGRLEELKGGPKLSRYAGQAIAEYVGRESRKLGLKSVVMRVKGFTFFKKKRQAIMSWR

Query:  DGFTDSRSDRNPIVYIEDTTRRAHNGCRLPKQRRV
         G T        +  I DTT   HNGCR PK+RRV
Subjt:  DGFTDSRSDRNPIVYIEDTTRRAHNGCRLPKQRRV

Q8VZT8 Probable ribosomal protein S11, mitochondrial1.2e-4855.56Show/hide
Query:  NADTGRNLKSMSFVKGILEEDGIDFTGSSRFPRPPNMEHNADIVHVKLMRNNTFITVTDYKGNTKLKASAGRLEELKGGPKLSRYAGQAIAEYVGRESRK
        N+ +G     + FV+ ++E++G    G     + PN+E NADI+H+K++RNNTF+TVTD KGN K KA++G L +LKGG K++ Y   A AE +GR ++ 
Subjt:  NADTGRNLKSMSFVKGILEEDGIDFTGSSRFPRPPNMEHNADIVHVKLMRNNTFITVTDYKGNTKLKASAGRLEELKGGPKLSRYAGQAIAEYVGRESRK

Query:  LGLKSVVMRVKGFTFFKKKRQAIMSWRDGFTDSRSDRNPIVYIEDTTRRAHNGCRLPKQRRV
        +GLKSVV++V GFT F KK++AI+++RDGFT+SRSD+NPIVYIEDTTR+AHNGCRLP++RRV
Subjt:  LGLKSVVMRVKGFTFFKKKRQAIMSWRDGFTDSRSDRNPIVYIEDTTRRAHNGCRLPKQRRV

Arabidopsis top hitse value%identityAlignment
AT1G31817.1 Ribosomal L18p/L5e family protein8.8e-5055.56Show/hide
Query:  NADTGRNLKSMSFVKGILEEDGIDFTGSSRFPRPPNMEHNADIVHVKLMRNNTFITVTDYKGNTKLKASAGRLEELKGGPKLSRYAGQAIAEYVGRESRK
        N+ +G     + FV+ ++E++G    G     + PN+E NADI+H+K++RNNTF+TVTD KGN K KA++G L +LKGG K++ Y   A AE +GR ++ 
Subjt:  NADTGRNLKSMSFVKGILEEDGIDFTGSSRFPRPPNMEHNADIVHVKLMRNNTFITVTDYKGNTKLKASAGRLEELKGGPKLSRYAGQAIAEYVGRESRK

Query:  LGLKSVVMRVKGFTFFKKKRQAIMSWRDGFTDSRSDRNPIVYIEDTTRRAHNGCRLPKQRRV
        +GLKSVV++V GFT F KK++AI+++RDGFT+SRSD+NPIVYIEDTTR+AHNGCRLP++RRV
Subjt:  LGLKSVVMRVKGFTFFKKKRQAIMSWRDGFTDSRSDRNPIVYIEDTTRRAHNGCRLPKQRRV

ATCG00750.1 ribosomal protein S111.0e-0530Show/hide
Query:  IVHVKLMRNNTFITVTDYKGNTKLKASAGRLEELKGGPKLSRYAGQAIAEYVGRESRKLGLKSVVMRVKGFTFFKKKRQAIMSWRDGFTDSRSDRNPIVY
        ++HV+   NNT +TVTD +G     +SAG     +G  + + +A Q  A    R     G++   +R+KG    +      +  R G          + +
Subjt:  IVHVKLMRNNTFITVTDYKGNTKLKASAGRLEELKGGPKLSRYAGQAIAEYVGRESRKLGLKSVVMRVKGFTFFKKKRQAIMSWRDGFTDSRSDRNPIVY

Query:  IEDTTRRAHNGCRLPKQRRV
        + D T   HNGCR PK+RRV
Subjt:  IEDTTRRAHNGCRLPKQRRV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCGAAACTTTCCCTCTCTCATCTCTCTTCTCTCTTCCAGTCGTCCTCTCTCCGTCATGGCCCTTCCTTTTCTCCCTCTCGCCTCTCTATTTCTCCATTCATTGGCTC
AGATTTGCGTTCTTCCATGTCCTCCCTCCACCGATCAGATCTCACTGGATCCGTTCAACTAGACAGCCGGGTCACAGGGTGTCTCGGCATTTCACAAGGTGATTCTGCGA
ATGTTGGTCGGGAGATTGTTGGACGTGGTTGGAAAGCCTTGGGAGCTCAGGGTTCTTGTTGGGGTTTGGCGCGTTCAAATGAAAGTGTCTCCGTTCCTTATTCTATTAGC
TCTAGATGTTATGGACAGTACACTAACTGGCCAAATGCAGATACAGGAAGAAATCTTAAGTCTATGAGTTTTGTTAAGGGAATTTTAGAGGAAGATGGAATAGATTTTAC
AGGTAGTTCTCGGTTCCCTAGACCACCCAATATGGAACACAATGCTGATATTGTTCATGTAAAGCTGATGCGTAACAATACATTTATCACTGTTACGGATTACAAGGGAA
ATACAAAGCTCAAGGCCTCTGCTGGTCGTCTTGAAGAACTTAAAGGAGGGCCTAAACTCTCCCGTTATGCTGGTCAAGCAATTGCAGAATATGTTGGCCGTGAATCTAGA
AAACTGGGGCTAAAATCAGTTGTGATGAGGGTGAAAGGCTTTACTTTTTTTAAGAAGAAAAGGCAGGCGATCATGAGTTGGAGAGATGGATTTACTGATTCTAGAAGTGA
TCGAAATCCGATTGTCTACATTGAAGATACTACAAGACGTGCTCACAATGGTTGCCGACTCCCGAAGCAACGCCGTGTCTAG
mRNA sequenceShow/hide mRNA sequence
ATTTTAGAAAATAAAAATTAATATTCACATTTGAAAAAAGTGGGGATCCCTATGTCTCATCCTCCACCAGGGAGGAATAAAGTTTAGGGTTTTCTTTTCGGCACTTCTTA
TTCACAGAACCACCGCCCGCGGCCGTCCGACGACGATGCCGAAACTTTCCCTCTCTCATCTCTCTTCTCTCTTCCAGTCGTCCTCTCTCCGTCATGGCCCTTCCTTTTCT
CCCTCTCGCCTCTCTATTTCTCCATTCATTGGCTCAGATTTGCGTTCTTCCATGTCCTCCCTCCACCGATCAGATCTCACTGGATCCGTTCAACTAGACAGCCGGGTCAC
AGGGTGTCTCGGCATTTCACAAGGTGATTCTGCGAATGTTGGTCGGGAGATTGTTGGACGTGGTTGGAAAGCCTTGGGAGCTCAGGGTTCTTGTTGGGGTTTGGCGCGTT
CAAATGAAAGTGTCTCCGTTCCTTATTCTATTAGCTCTAGATGTTATGGACAGTACACTAACTGGCCAAATGCAGATACAGGAAGAAATCTTAAGTCTATGAGTTTTGTT
AAGGGAATTTTAGAGGAAGATGGAATAGATTTTACAGGTAGTTCTCGGTTCCCTAGACCACCCAATATGGAACACAATGCTGATATTGTTCATGTAAAGCTGATGCGTAA
CAATACATTTATCACTGTTACGGATTACAAGGGAAATACAAAGCTCAAGGCCTCTGCTGGTCGTCTTGAAGAACTTAAAGGAGGGCCTAAACTCTCCCGTTATGCTGGTC
AAGCAATTGCAGAATATGTTGGCCGTGAATCTAGAAAACTGGGGCTAAAATCAGTTGTGATGAGGGTGAAAGGCTTTACTTTTTTTAAGAAGAAAAGGCAGGCGATCATG
AGTTGGAGAGATGGATTTACTGATTCTAGAAGTGATCGAAATCCGATTGTCTACATTGAAGATACTACAAGACGTGCTCACAATGGTTGCCGACTCCCGAAGCAACGCCG
TGTCTAGATGTATGGTGCTAGATCTTTGCTAATACAACAGCAAATTGGTGATGAGGCTTTTTGATAGTTGATGCTGGATTTATACCCTGGATATGGACCATCAGCATGGA
TGACCAAATGGGCACATCATGGAGATTAAGAATTGTTTGGTAACAGGAAAATTTACCAAATGTTCTAGAACCAGAAAGCCTCCATGGATAGTTGGTAGAGGAAGGTGTTC
CATACAGTTCTGAATAGAAGGATGGAGAAATAAAGCTACTCAGGCTGATAAATCGGTATGCTATCTACAATTTTGTTCCTTAGTATGATGGCTCATTTGAAGTTACTTGG
TGCGCCCATGTTTTCTTGCTAAATCTTTTCTGAGGATGTAATTTGTCGCTGTCTCAGCACATCTTTCTCCTTTATGTTTTGGAGGTACTTGCATTAACTGATATGAAACT
GAATGACGTTAATTAATAGGACTAAC
Protein sequenceShow/hide protein sequence
MPKLSLSHLSSLFQSSSLRHGPSFSPSRLSISPFIGSDLRSSMSSLHRSDLTGSVQLDSRVTGCLGISQGDSANVGREIVGRGWKALGAQGSCWGLARSNESVSVPYSIS
SRCYGQYTNWPNADTGRNLKSMSFVKGILEEDGIDFTGSSRFPRPPNMEHNADIVHVKLMRNNTFITVTDYKGNTKLKASAGRLEELKGGPKLSRYAGQAIAEYVGRESR
KLGLKSVVMRVKGFTFFKKKRQAIMSWRDGFTDSRSDRNPIVYIEDTTRRAHNGCRLPKQRRV