; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CcUC10G194600 (gene) of Watermelon (PI 537277) v1 genome

Gene IDCcUC10G194600
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionGTP cyclohydrolase II
Genome locationCicolChr10:18418266..18418604
RNA-Seq ExpressionCcUC10G194600
SyntenyCcUC10G194600
Gene Ontology termsGO:0009231 - riboflavin biosynthetic process (biological process)
GO:0009507 - chloroplast (cellular component)
GO:0003935 - GTP cyclohydrolase II activity (molecular function)
GO:0005525 - GTP binding (molecular function)
GO:0008686 - 3,4-dihydroxy-2-butanone-4-phosphate synthase activity (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR000422 - 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB
IPR017945 - DHBP synthase RibB-like alpha/beta domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYK29921.1 bifunctional riboflavin biosynthesis protein RIBA 1 [Cucumis melo var. makuwa]6.1e-4993.58Show/hide
Query:  DGREGTTTGVSAEDRVATVVALASKHSIPYDFKRPGHIFPLKYREGGVLSRPGHTEASVDLAELAGLFPAGILCEIV-DEDGSMARLPKLRQFAQHHSLK
        DGR+GTTTGVSAEDRVATVVALASKHS PYDFKRPGHIFPL+YREGGVL RPGHTEASVDLAELAGLFPAGILCEIV DEDGSMARLPKLRQFA+HH LK
Subjt:  DGREGTTTGVSAEDRVATVVALASKHSIPYDFKRPGHIFPLKYREGGVLSRPGHTEASVDLAELAGLFPAGILCEIV-DEDGSMARLPKLRQFAQHHSLK

Query:  IISIADLIR
        IISIADLIR
Subjt:  IISIADLIR

XP_008462878.1 PREDICTED: bifunctional riboflavin biosynthesis protein RIBA 1, chloroplastic-like isoform X1 [Cucumis melo]6.1e-4993.58Show/hide
Query:  DGREGTTTGVSAEDRVATVVALASKHSIPYDFKRPGHIFPLKYREGGVLSRPGHTEASVDLAELAGLFPAGILCEIV-DEDGSMARLPKLRQFAQHHSLK
        DGR+GTTTGVSAEDRVATVVALASKHS PYDFKRPGHIFPL+YREGGVL RPGHTEASVDLAELAGLFPAGILCEIV DEDGSMARLPKLRQFA+HH LK
Subjt:  DGREGTTTGVSAEDRVATVVALASKHSIPYDFKRPGHIFPLKYREGGVLSRPGHTEASVDLAELAGLFPAGILCEIV-DEDGSMARLPKLRQFAQHHSLK

Query:  IISIADLIR
        IISIADLIR
Subjt:  IISIADLIR

XP_008462879.1 PREDICTED: bifunctional riboflavin biosynthesis protein RIBA 1, chloroplastic-like isoform X2 [Cucumis melo]6.1e-4993.58Show/hide
Query:  DGREGTTTGVSAEDRVATVVALASKHSIPYDFKRPGHIFPLKYREGGVLSRPGHTEASVDLAELAGLFPAGILCEIV-DEDGSMARLPKLRQFAQHHSLK
        DGR+GTTTGVSAEDRVATVVALASKHS PYDFKRPGHIFPL+YREGGVL RPGHTEASVDLAELAGLFPAGILCEIV DEDGSMARLPKLRQFA+HH LK
Subjt:  DGREGTTTGVSAEDRVATVVALASKHSIPYDFKRPGHIFPLKYREGGVLSRPGHTEASVDLAELAGLFPAGILCEIV-DEDGSMARLPKLRQFAQHHSLK

Query:  IISIADLIR
        IISIADLIR
Subjt:  IISIADLIR

XP_031739798.1 bifunctional riboflavin biosynthesis protein RIBA 1, chloroplastic [Cucumis sativus]4.0e-4891.74Show/hide
Query:  DGREGTTTGVSAEDRVATVVALASKHSIPYDFKRPGHIFPLKYREGGVLSRPGHTEASVDLAELAGLFPAGILCEIV-DEDGSMARLPKLRQFAQHHSLK
        DGR+GTTTGVSAEDRVATV+ALASKHS PYDFKRPGHIFPL+YREGGVL RPGHTEASVDLA+LAGLFPAGILCEIV DEDGSMARLPKLRQFA+HHSLK
Subjt:  DGREGTTTGVSAEDRVATVVALASKHSIPYDFKRPGHIFPLKYREGGVLSRPGHTEASVDLAELAGLFPAGILCEIV-DEDGSMARLPKLRQFAQHHSLK

Query:  IISIADLIR
        II IADLIR
Subjt:  IISIADLIR

XP_038877314.1 bifunctional riboflavin biosynthesis protein RIBA 1, chloroplastic-like [Benincasa hispida]6.6e-5195.37Show/hide
Query:  DGREGTTTGVSAEDRVATVVALASKHSIPYDFKRPGHIFPLKYREGGVLSRPGHTEASVDLAELAGLFPAGILCEIVDEDGSMARLPKLRQFAQHHSLKI
        DGREGTTTGVSAEDRVATVVALASKHS PYDFKRPGHIFPLKYREGGVL RPGHTEASVDLAELAGLFPAGILCEIVDEDGSMARLPKLR+F+QHH+LKI
Subjt:  DGREGTTTGVSAEDRVATVVALASKHSIPYDFKRPGHIFPLKYREGGVLSRPGHTEASVDLAELAGLFPAGILCEIVDEDGSMARLPKLRQFAQHHSLKI

Query:  ISIADLIR
        ISIADLIR
Subjt:  ISIADLIR

TrEMBL top hitse value%identityAlignment
A0A0A0KVX4 GTP cyclohydrolase II1.9e-4891.74Show/hide
Query:  DGREGTTTGVSAEDRVATVVALASKHSIPYDFKRPGHIFPLKYREGGVLSRPGHTEASVDLAELAGLFPAGILCEIV-DEDGSMARLPKLRQFAQHHSLK
        DGR+GTTTGVSAEDRVATV+ALASKHS PYDFKRPGHIFPL+YREGGVL RPGHTEASVDLA+LAGLFPAGILCEIV DEDGSMARLPKLRQFA+HHSLK
Subjt:  DGREGTTTGVSAEDRVATVVALASKHSIPYDFKRPGHIFPLKYREGGVLSRPGHTEASVDLAELAGLFPAGILCEIV-DEDGSMARLPKLRQFAQHHSLK

Query:  IISIADLIR
        II IADLIR
Subjt:  IISIADLIR

A0A1S3CIF1 GTP cyclohydrolase II3.0e-4993.58Show/hide
Query:  DGREGTTTGVSAEDRVATVVALASKHSIPYDFKRPGHIFPLKYREGGVLSRPGHTEASVDLAELAGLFPAGILCEIV-DEDGSMARLPKLRQFAQHHSLK
        DGR+GTTTGVSAEDRVATVVALASKHS PYDFKRPGHIFPL+YREGGVL RPGHTEASVDLAELAGLFPAGILCEIV DEDGSMARLPKLRQFA+HH LK
Subjt:  DGREGTTTGVSAEDRVATVVALASKHSIPYDFKRPGHIFPLKYREGGVLSRPGHTEASVDLAELAGLFPAGILCEIV-DEDGSMARLPKLRQFAQHHSLK

Query:  IISIADLIR
        IISIADLIR
Subjt:  IISIADLIR

A0A1S3CJI1 GTP cyclohydrolase II3.0e-4993.58Show/hide
Query:  DGREGTTTGVSAEDRVATVVALASKHSIPYDFKRPGHIFPLKYREGGVLSRPGHTEASVDLAELAGLFPAGILCEIV-DEDGSMARLPKLRQFAQHHSLK
        DGR+GTTTGVSAEDRVATVVALASKHS PYDFKRPGHIFPL+YREGGVL RPGHTEASVDLAELAGLFPAGILCEIV DEDGSMARLPKLRQFA+HH LK
Subjt:  DGREGTTTGVSAEDRVATVVALASKHSIPYDFKRPGHIFPLKYREGGVLSRPGHTEASVDLAELAGLFPAGILCEIV-DEDGSMARLPKLRQFAQHHSLK

Query:  IISIADLIR
        IISIADLIR
Subjt:  IISIADLIR

A0A5D3D4N7 GTP cyclohydrolase II2.1e-4281.48Show/hide
Query:  DGREGTTTGVSAEDRVATVVALASKHSIPYDFKRPGHIFPLKYREGGVLSRPGHTEASVDLAELAGLFPAGILCEIVDEDGSMARLPKLRQFAQHHSLKI
        D REGTTTGVSA DR ATV+ALAS++S PYDFKRPGHIFPLKYREGGVL R GHTEASVDLA LAGL P GILCE+VDEDGSMARLPKLR+FA+  ++KI
Subjt:  DGREGTTTGVSAEDRVATVVALASKHSIPYDFKRPGHIFPLKYREGGVLSRPGHTEASVDLAELAGLFPAGILCEIVDEDGSMARLPKLRQFAQHHSLKI

Query:  ISIADLIR
        ISIADL+R
Subjt:  ISIADLIR

A0A5D3E2U7 GTP cyclohydrolase II3.0e-4993.58Show/hide
Query:  DGREGTTTGVSAEDRVATVVALASKHSIPYDFKRPGHIFPLKYREGGVLSRPGHTEASVDLAELAGLFPAGILCEIV-DEDGSMARLPKLRQFAQHHSLK
        DGR+GTTTGVSAEDRVATVVALASKHS PYDFKRPGHIFPL+YREGGVL RPGHTEASVDLAELAGLFPAGILCEIV DEDGSMARLPKLRQFA+HH LK
Subjt:  DGREGTTTGVSAEDRVATVVALASKHSIPYDFKRPGHIFPLKYREGGVLSRPGHTEASVDLAELAGLFPAGILCEIV-DEDGSMARLPKLRQFAQHHSLK

Query:  IISIADLIR
        IISIADLIR
Subjt:  IISIADLIR

SwissProt top hitse value%identityAlignment
P47924 Bifunctional riboflavin biosynthesis protein RIBA 1, chloroplastic2.4e-4073.15Show/hide
Query:  DGREGTTTGVSAEDRVATVVALASKHSIPYDFKRPGHIFPLKYREGGVLSRPGHTEASVDLAELAGLFPAGILCEIVDEDGSMARLPKLRQFAQHHSLKI
        D + GTTTGVSA DR  T+++LAS+ S P DF RPGHIFPLKYREGGVL R GHTEASVDL  LAGL P G+LCEIVD+DGSMARLPKLR+FA  ++LK+
Subjt:  DGREGTTTGVSAEDRVATVVALASKHSIPYDFKRPGHIFPLKYREGGVLSRPGHTEASVDLAELAGLFPAGILCEIVDEDGSMARLPKLRQFAQHHSLKI

Query:  ISIADLIR
        +SIADLIR
Subjt:  ISIADLIR

Q0AXM5 Riboflavin biosynthesis protein RibBA2.0e-3465.05Show/hide
Query:  GTTTGVSAEDRVATVVALASKHSIPYDFKRPGHIFPLKYREGGVLSRPGHTEASVDLAELAGLFPAGILCEIVDEDGSMARLPKLRQFAQHHSLKIISIA
        GTTTG+SA +R ATV AL    S P DF++PGHIFPL+YREGGVL R GHTE S+DL  LAGL+PA ++CE+++EDG+MARLP+L +FA+ H+LK+ SIA
Subjt:  GTTTGVSAEDRVATVVALASKHSIPYDFKRPGHIFPLKYREGGVLSRPGHTEASVDLAELAGLFPAGILCEIVDEDGSMARLPKLRQFAQHHSLKIISIA

Query:  DLI
        DLI
Subjt:  DLI

Q0E079 Probable bifunctional riboflavin biosynthesis protein RIBA 2, chloroplastic6.4e-4177.78Show/hide
Query:  DGREGTTTGVSAEDRVATVVALASKHSIPYDFKRPGHIFPLKYREGGVLSRPGHTEASVDLAELAGLFPAGILCEIVDEDGSMARLPKLRQFAQHHSLKI
        D +EGTTTGVSA+DR  TV+ LAS  S P DF RPGHIFPLKYREGGVL R GHTEASVDLA LAGL PA +LCEIVDEDGSMARLPKLR FA+  +LKI
Subjt:  DGREGTTTGVSAEDRVATVVALASKHSIPYDFKRPGHIFPLKYREGGVLSRPGHTEASVDLAELAGLFPAGILCEIVDEDGSMARLPKLRQFAQHHSLKI

Query:  ISIADLIR
        +SIADLIR
Subjt:  ISIADLIR

Q6NLQ7 Monofunctional riboflavin biosynthesis protein RIBA 2, chloroplastic9.2e-4073.15Show/hide
Query:  DGREGTTTGVSAEDRVATVVALASKHSIPYDFKRPGHIFPLKYREGGVLSRPGHTEASVDLAELAGLFPAGILCEIVDEDGSMARLPKLRQFAQHHSLKI
        D ++GT+TGVSA DR  T++ LASK S P DF RPGHIFPL+YREGGVL R GHTEASVDL  LAGL P  +LCEIVD+DGSMARLP+LRQFAQ ++LK+
Subjt:  DGREGTTTGVSAEDRVATVVALASKHSIPYDFKRPGHIFPLKYREGGVLSRPGHTEASVDLAELAGLFPAGILCEIVDEDGSMARLPKLRQFAQHHSLKI

Query:  ISIADLIR
        ISIADLIR
Subjt:  ISIADLIR

Q6Z234 Probable bifunctional riboflavin biosynthesis protein RIBA 1, chloroplastic1.0e-3876.15Show/hide
Query:  DGREGTTTGVSAEDRVATVVALASKHSIPYDFKRPGHIFPLKYREGGVLSRPGHTEASVDLAELAGLFPAGILCEIV-DEDGSMARLPKLRQFAQHHSLK
        D +EGTTTGVSA+DR  TV+ALAS +S P DF RPGHIFPLKYREGGVL R GHTEASVDLA LAGL PA +LCEIV D+DGSMA LPKL+ FA+  +LK
Subjt:  DGREGTTTGVSAEDRVATVVALASKHSIPYDFKRPGHIFPLKYREGGVLSRPGHTEASVDLAELAGLFPAGILCEIV-DEDGSMARLPKLRQFAQHHSLK

Query:  IISIADLIR
        IISIADLIR
Subjt:  IISIADLIR

Arabidopsis top hitse value%identityAlignment
AT2G22450.1 riboflavin biosynthesis protein, putative6.6e-4173.15Show/hide
Query:  DGREGTTTGVSAEDRVATVVALASKHSIPYDFKRPGHIFPLKYREGGVLSRPGHTEASVDLAELAGLFPAGILCEIVDEDGSMARLPKLRQFAQHHSLKI
        D ++GT+TGVSA DR  T++ LASK S P DF RPGHIFPL+YREGGVL R GHTEASVDL  LAGL P  +LCEIVD+DGSMARLP+LRQFAQ ++LK+
Subjt:  DGREGTTTGVSAEDRVATVVALASKHSIPYDFKRPGHIFPLKYREGGVLSRPGHTEASVDLAELAGLFPAGILCEIVDEDGSMARLPKLRQFAQHHSLKI

Query:  ISIADLIR
        ISIADLIR
Subjt:  ISIADLIR

AT5G59750.1 DHBP synthase RibB-like alpha/beta domain;GTP cyclohydrolase II9.5e-3260.55Show/hide
Query:  DGREGTTTGVSAEDRVATVVALASKHSIPYDFKRPGHIFPLKYREGGVLSRPGHTEASVDLAELAGLFPAGILCEIVD-EDGSMARLPKLRQFAQHHSLK
        D + GT+TGVSA DR  TV+AL+S  + P DF+RPGH+FPLKYR+GGVL R GHTEASVDL  LAGL P  +L  I+D EDGSMA LP +++ A  H + 
Subjt:  DGREGTTTGVSAEDRVATVVALASKHSIPYDFKRPGHIFPLKYREGGVLSRPGHTEASVDLAELAGLFPAGILCEIVD-EDGSMARLPKLRQFAQHHSLK

Query:  IISIADLIR
        I+S+ DLIR
Subjt:  IISIADLIR

AT5G59750.2 DHBP synthase RibB-like alpha/beta domain;GTP cyclohydrolase II9.5e-3260.55Show/hide
Query:  DGREGTTTGVSAEDRVATVVALASKHSIPYDFKRPGHIFPLKYREGGVLSRPGHTEASVDLAELAGLFPAGILCEIVD-EDGSMARLPKLRQFAQHHSLK
        D + GT+TGVSA DR  TV+AL+S  + P DF+RPGH+FPLKYR+GGVL R GHTEASVDL  LAGL P  +L  I+D EDGSMA LP +++ A  H + 
Subjt:  DGREGTTTGVSAEDRVATVVALASKHSIPYDFKRPGHIFPLKYREGGVLSRPGHTEASVDLAELAGLFPAGILCEIVD-EDGSMARLPKLRQFAQHHSLK

Query:  IISIADLIR
        I+S+ DLIR
Subjt:  IISIADLIR

AT5G64300.1 GTP cyclohydrolase II1.7e-4173.15Show/hide
Query:  DGREGTTTGVSAEDRVATVVALASKHSIPYDFKRPGHIFPLKYREGGVLSRPGHTEASVDLAELAGLFPAGILCEIVDEDGSMARLPKLRQFAQHHSLKI
        D + GTTTGVSA DR  T+++LAS+ S P DF RPGHIFPLKYREGGVL R GHTEASVDL  LAGL P G+LCEIVD+DGSMARLPKLR+FA  ++LK+
Subjt:  DGREGTTTGVSAEDRVATVVALASKHSIPYDFKRPGHIFPLKYREGGVLSRPGHTEASVDLAELAGLFPAGILCEIVDEDGSMARLPKLRQFAQHHSLKI

Query:  ISIADLIR
        +SIADLIR
Subjt:  ISIADLIR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGAAGGATGGAAGAGAGGGCACAACGACGGGAGTTTCAGCGGAGGATAGGGTGGCGACGGTGGTGGCATTGGCATCAAAACACTCAATACCATATGATTTTAAACG
ACCGGGTCATATCTTTCCCCTCAAATATAGAGAAGGAGGGGTTTTGAGCAGGCCTGGCCACACGGAAGCCTCCGTCGATCTAGCAGAGCTTGCTGGACTCTTTCCCGCCG
GAATTCTCTGTGAGATCGTCGACGAGGATGGCTCCATGGCTAGGCTCCCAAAGCTTCGCCAGTTTGCTCAACATCATAGTCTCAAAATTATCTCCATTGCTGACTTGATC
AGGTCCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGTGAAGGATGGAAGAGAGGGCACAACGACGGGAGTTTCAGCGGAGGATAGGGTGGCGACGGTGGTGGCATTGGCATCAAAACACTCAATACCATATGATTTTAAACG
ACCGGGTCATATCTTTCCCCTCAAATATAGAGAAGGAGGGGTTTTGAGCAGGCCTGGCCACACGGAAGCCTCCGTCGATCTAGCAGAGCTTGCTGGACTCTTTCCCGCCG
GAATTCTCTGTGAGATCGTCGACGAGGATGGCTCCATGGCTAGGCTCCCAAAGCTTCGCCAGTTTGCTCAACATCATAGTCTCAAAATTATCTCCATTGCTGACTTGATC
AGGTCCTAA
Protein sequenceShow/hide protein sequence
MVKDGREGTTTGVSAEDRVATVVALASKHSIPYDFKRPGHIFPLKYREGGVLSRPGHTEASVDLAELAGLFPAGILCEIVDEDGSMARLPKLRQFAQHHSLKIISIADLI
RS