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CcUC10G194680 (gene) of Watermelon (PI 537277) v1 genome

Gene IDCcUC10G194680
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionBnaC08g14780D protein
Genome locationCicolChr10:19001892..19002173
RNA-Seq ExpressionCcUC10G194680
SyntenyCcUC10G194680
Gene Ontology termsGO:0006952 - defense response (biological process)
GO:0009607 - response to biotic stimulus (biological process)
GO:0009767 - photosynthetic electron transport chain (biological process)
GO:0018298 - protein-chromophore linkage (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0009521 - photosystem (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0043229 - intracellular organelle (cellular component)
GO:0005516 - calmodulin binding (molecular function)
GO:0016168 - chlorophyll binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAF2108280.1 unnamed protein product [Brassica napus]1.0e-2877.17Show/hide
Query:  MSGKALLRFREAIHIDVMKVRDLQQSQNVLNNRPVCQAESPEIFPLCLQLHRKTTCKPYYGHPSLVVRGFHYQEVYPRLLVPISPDTLLILL
        MSG+ALL FREAIH DVMKVR  +QS N  NNR VCQAES EIFPL LQLH K TCKPYY HPS VV  FHYQEVYPRLLVPI  DTLLI L
Subjt:  MSGKALLRFREAIHIDVMKVRDLQQSQNVLNNRPVCQAESPEIFPLCLQLHRKTTCKPYYGHPSLVVRGFHYQEVYPRLLVPISPDTLLILL

CDY50226.1 BnaC08g14780D [Brassica napus]9.7e-3280.43Show/hide
Query:  MSGKALLRFREAIHIDVMKVRDLQQSQNVLNNRPVCQAESPEIFPLCLQLHRKTTCKPYYGHPSLVVRGFHYQEVYPRLLVPISPDTLLILL
        MSG+ALL FREAIH DVMKVR  +QS N  NNRPVCQAES EIFPL LQLH K TCKPYY HPS VV GFHYQEVYPRLLVPI PDTLLI L
Subjt:  MSGKALLRFREAIHIDVMKVRDLQQSQNVLNNRPVCQAESPEIFPLCLQLHRKTTCKPYYGHPSLVVRGFHYQEVYPRLLVPISPDTLLILL

KAF4371305.1 hypothetical protein F8388_023465 [Cannabis sativa]2.0e-1376.47Show/hide
Query:  NNRPVCQAESPEIFPLCLQLHRKTTCKPYYGHPSLVVRGFHYQEVYPRLLV
        NN+ V Q ES EIFPLCLQLH KTTCKPYY H +LVVRGFHYQE YP+LL+
Subjt:  NNRPVCQAESPEIFPLCLQLHRKTTCKPYYGHPSLVVRGFHYQEVYPRLLV

VDD55843.1 unnamed protein product [Brassica oleracea]5.1e-2570.65Show/hide
Query:  MSGKALLRFREAIHIDVMKVRDLQQSQNVLNNRPVCQAESPEIFPLCLQLHRKTTCKPYYGHPSLVVRGFHYQEVYPRLLVPISPDTLLILL
        MS +ALL FREAIH D+MKVR  +QS N  NNR +CQAES EIFP  LQLH K TCKPYY H S VV  FHYQEVYPRLL PI  DTLLI L
Subjt:  MSGKALLRFREAIHIDVMKVRDLQQSQNVLNNRPVCQAESPEIFPLCLQLHRKTTCKPYYGHPSLVVRGFHYQEVYPRLLVPISPDTLLILL

YP_009381276.1 hypothetical protein AEK19_MT0876 [Utricularia reniformis]2.0e-0578.79Show/hide
Query:  TCKPYYGHPSLVVRGFHYQEVYPRLLVPISPDT
        TCK YY HPS   RGFHYQEVYPRLLV I PDT
Subjt:  TCKPYYGHPSLVVRGFHYQEVYPRLLVPISPDT

TrEMBL top hitse value%identityAlignment
A0A078IJQ4 BnaC08g14780D protein4.7e-3280.43Show/hide
Query:  MSGKALLRFREAIHIDVMKVRDLQQSQNVLNNRPVCQAESPEIFPLCLQLHRKTTCKPYYGHPSLVVRGFHYQEVYPRLLVPISPDTLLILL
        MSG+ALL FREAIH DVMKVR  +QS N  NNRPVCQAES EIFPL LQLH K TCKPYY HPS VV GFHYQEVYPRLLVPI PDTLLI L
Subjt:  MSGKALLRFREAIHIDVMKVRDLQQSQNVLNNRPVCQAESPEIFPLCLQLHRKTTCKPYYGHPSLVVRGFHYQEVYPRLLVPISPDTLLILL

A0A1Y0B150 Uncharacterized protein9.8e-0678.79Show/hide
Query:  TCKPYYGHPSLVVRGFHYQEVYPRLLVPISPDT
        TCK YY HPS   RGFHYQEVYPRLLV I PDT
Subjt:  TCKPYYGHPSLVVRGFHYQEVYPRLLVPISPDT

A0A3P6FDC6 Uncharacterized protein2.5e-2570.65Show/hide
Query:  MSGKALLRFREAIHIDVMKVRDLQQSQNVLNNRPVCQAESPEIFPLCLQLHRKTTCKPYYGHPSLVVRGFHYQEVYPRLLVPISPDTLLILL
        MS +ALL FREAIH D+MKVR  +QS N  NNR +CQAES EIFP  LQLH K TCKPYY H S VV  FHYQEVYPRLL PI  DTLLI L
Subjt:  MSGKALLRFREAIHIDVMKVRDLQQSQNVLNNRPVCQAESPEIFPLCLQLHRKTTCKPYYGHPSLVVRGFHYQEVYPRLLVPISPDTLLILL

A0A7J6FL05 Uncharacterized protein9.8e-1476.47Show/hide
Query:  NNRPVCQAESPEIFPLCLQLHRKTTCKPYYGHPSLVVRGFHYQEVYPRLLV
        NN+ V Q ES EIFPLCLQLH KTTCKPYY H +LVVRGFHYQE YP+LL+
Subjt:  NNRPVCQAESPEIFPLCLQLHRKTTCKPYYGHPSLVVRGFHYQEVYPRLLV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTGGAAAAGCTCTATTGCGATTTCGCGAGGCAATCCACATCGATGTAATGAAAGTGAGGGACCTACAACAATCACAGAACGTCCTGAATAATCGACCCGTTTGCCA
AGCAGAGTCTCCCGAAATCTTCCCTCTTTGCCTTCAATTACATCGGAAAACGACTTGTAAACCTTATTATGGCCATCCCTCATTGGTTGTCCGCGGATTCCATTATCAAG
AAGTGTATCCACGGCTTCTTGTACCAATTTCTCCTGACACATTACTAATTCTCCTGGCGTAG
mRNA sequenceShow/hide mRNA sequence
ATGTCTGGAAAAGCTCTATTGCGATTTCGCGAGGCAATCCACATCGATGTAATGAAAGTGAGGGACCTACAACAATCACAGAACGTCCTGAATAATCGACCCGTTTGCCA
AGCAGAGTCTCCCGAAATCTTCCCTCTTTGCCTTCAATTACATCGGAAAACGACTTGTAAACCTTATTATGGCCATCCCTCATTGGTTGTCCGCGGATTCCATTATCAAG
AAGTGTATCCACGGCTTCTTGTACCAATTTCTCCTGACACATTACTAATTCTCCTGGCGTAG
Protein sequenceShow/hide protein sequence
MSGKALLRFREAIHIDVMKVRDLQQSQNVLNNRPVCQAESPEIFPLCLQLHRKTTCKPYYGHPSLVVRGFHYQEVYPRLLVPISPDTLLILLA