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CcUC10G194980 (gene) of Watermelon (PI 537277) v1 genome

Gene IDCcUC10G194980
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionUnknown protein
Genome locationCicolChr10:19614621..19616001
RNA-Seq ExpressionCcUC10G194980
SyntenyCcUC10G194980
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
RDX74794.1 hypothetical protein CR513_45411, partial [Mucuna pruriens]2.8e-0645.56Show/hide
Query:  AGISSPMSTSSSPASPLRCFFVSEPTSIFSG--------------------IGSLALGFGCFNGFTGGARRGEGVLTGDCIIGGLEELDG
        A +SS +S+ S    P     +    SIFSG                    +GSLA GFGCF  FTGGAR G+GV TGDC IGGLEEL G
Subjt:  AGISSPMSTSSSPASPLRCFFVSEPTSIFSG--------------------IGSLALGFGCFNGFTGGARRGEGVLTGDCIIGGLEELDG

RDX84470.1 hypothetical protein CR513_34473, partial [Mucuna pruriens]3.6e-0967.16Show/hide
Query:  MEEESSLLELLEPLELLLAWPPPA-SFSISTGGKLLAGISSPMSTSSSPASPLRCFFV-SEPTSIFS
        +++E  LLELLE LELLLAWPP + SFSISTGG +L GISSP+STSSSPAS    FF  S P S FS
Subjt:  MEEESSLLELLEPLELLLAWPPPA-SFSISTGGKLLAGISSPMSTSSSPASPLRCFFV-SEPTSIFS

WP_204986788.1 hypothetical protein, partial [Escherichia coli]2.0e-0772.22Show/hide
Query:  MEEESSLLELLEPLELLLAWPPPA--SFSISTGGKLLAGISSPMSTSSSPASPL
        +++E SL ELLE LELLLAWPP    SFSISTGGKL  GISSPMSTSSSPA+ +
Subjt:  MEEESSLLELLEPLELLLAWPPPA--SFSISTGGKLLAGISSPMSTSSSPASPL

TrEMBL top hitse value%identityAlignment
A0A371F926 Uncharacterized protein (Fragment)1.4e-0645.56Show/hide
Query:  AGISSPMSTSSSPASPLRCFFVSEPTSIFSG--------------------IGSLALGFGCFNGFTGGARRGEGVLTGDCIIGGLEELDG
        A +SS +S+ S    P     +    SIFSG                    +GSLA GFGCF  FTGGAR G+GV TGDC IGGLEEL G
Subjt:  AGISSPMSTSSSPASPLRCFFVSEPTSIFSG--------------------IGSLALGFGCFNGFTGGARRGEGVLTGDCIIGGLEELDG

A0A371G1R4 Uncharacterized protein (Fragment)1.7e-0967.16Show/hide
Query:  MEEESSLLELLEPLELLLAWPPPA-SFSISTGGKLLAGISSPMSTSSSPASPLRCFFV-SEPTSIFS
        +++E  LLELLE LELLLAWPP + SFSISTGG +L GISSP+STSSSPAS    FF  S P S FS
Subjt:  MEEESSLLELLEPLELLLAWPPPA-SFSISTGGKLLAGISSPMSTSSSPASPLRCFFV-SEPTSIFS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGGAAGAATCATCGCTGCTTGAACTACTGGAGCCGCTGGAACTACTGCTAGCATGGCCTCCCCCGGCATCTTTCTCGATCTCCACCGGTGGAAAATTGCTTGCAGG
CATTTCATCGCCGATGTCCACATCTTCCTCACCAGCCTCCCCTCTCCGTTGCTTTTTCGTTTCGGAACCCACTTCAATTTTCTCAGGGATAGGATCTTTAGCTCTTGGTT
TCGGCTGCTTCAACGGCTTTACAGGCGGTGCTCGTAGAGGTGAGGGAGTTTTAACAGGTGACTGCATCATAGGCGGGTTAGAAGAGCTTGACGGAGCTTTCATTGCCTCT
GTCTTCTTCACAATTTGCTTCTGGCCTCTGAGTGATTCCATGAACTCGCTGGTAACTCTTCCTGGTAGCCACGGAACCGCCGATCTTCTTCTTCGAGCAGTTCACCCACA
GGTCGAAACAATTCCTCAAATCTTATCAGTCATCGCGTTCTTGAAGGTCAACCTCACGTCGGAAGCAAAATCGAACGACCGCTTCAACTCCATACCGTTGCTCGACGTTG
GCAAAGGCCGCTTGGTTCCTGATGTTTTTGACGATTTTTTCTGGTGTGTCGGTCTGGAATGTAGTTCACCTGAATTGATGCGACTTTTCAATTGCCGAATCTGTTCTAGC
TCGGAAATTAACTTTGTTTTCAGCTCGATCAGCTCCTTCCTCGAACACGATGAAACGTTGAAGCTCACGTATTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAGGAAGAATCATCGCTGCTTGAACTACTGGAGCCGCTGGAACTACTGCTAGCATGGCCTCCCCCGGCATCTTTCTCGATCTCCACCGGTGGAAAATTGCTTGCAGG
CATTTCATCGCCGATGTCCACATCTTCCTCACCAGCCTCCCCTCTCCGTTGCTTTTTCGTTTCGGAACCCACTTCAATTTTCTCAGGGATAGGATCTTTAGCTCTTGGTT
TCGGCTGCTTCAACGGCTTTACAGGCGGTGCTCGTAGAGGTGAGGGAGTTTTAACAGGTGACTGCATCATAGGCGGGTTAGAAGAGCTTGACGGAGCTTTCATTGCCTCT
GTCTTCTTCACAATTTGCTTCTGGCCTCTGAGTGATTCCATGAACTCGCTGGTAACTCTTCCTGGTAGCCACGGAACCGCCGATCTTCTTCTTCGAGCAGTTCACCCACA
GGTCGAAACAATTCCTCAAATCTTATCAGTCATCGCGTTCTTGAAGGTCAACCTCACGTCGGAAGCAAAATCGAACGACCGCTTCAACTCCATACCGTTGCTCGACGTTG
GCAAAGGCCGCTTGGTTCCTGATGTTTTTGACGATTTTTTCTGGTGTGTCGGTCTGGAATGTAGTTCACCTGAATTGATGCGACTTTTCAATTGCCGAATCTGTTCTAGC
TCGGAAATTAACTTTGTTTTCAGCTCGATCAGCTCCTTCCTCGAACACGATGAAACGTTGAAGCTCACGTATTGA
Protein sequenceShow/hide protein sequence
MEEESSLLELLEPLELLLAWPPPASFSISTGGKLLAGISSPMSTSSSPASPLRCFFVSEPTSIFSGIGSLALGFGCFNGFTGGARRGEGVLTGDCIIGGLEELDGAFIAS
VFFTICFWPLSDSMNSLVTLPGSHGTADLLLRAVHPQVETIPQILSVIAFLKVNLTSEAKSNDRFNSIPLLDVGKGRLVPDVFDDFFWCVGLECSSPELMRLFNCRICSS
SEINFVFSSISSFLEHDETLKLTY