; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CcUC10G195260 (gene) of Watermelon (PI 537277) v1 genome

Gene IDCcUC10G195260
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
Descriptioncysteine-rich and transmembrane domain-containing protein A-like
Genome locationCicolChr10:20360806..20362924
RNA-Seq ExpressionCcUC10G195260
SyntenyCcUC10G195260
Gene Ontology termsGO:0005886 - plasma membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR028144 - Cysteine-rich transmembrane CYSTM domain
IPR044850 - Cysteine-rich and transmembrane domain-containing protein WIH1/2-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008454408.1 PREDICTED: cysteine-rich and transmembrane domain-containing protein A-like [Cucumis melo]1.8e-43100Show/hide
Query:  MSYYNQGQPPIGVPPPQGYPPEGYPKDAYPPPGYPPQGYPPPGAYPPQGYPPPYAPQYAQPPPQQQSSGPGCLEGCLAALCCCCLLDACF
        MSYYNQGQPPIGVPPPQGYPPEGYPKDAYPPPGYPPQGYPPPGAYPPQGYPPPYAPQYAQPPPQQQSSGPGCLEGCLAALCCCCLLDACF
Subjt:  MSYYNQGQPPIGVPPPQGYPPEGYPKDAYPPPGYPPQGYPPPGAYPPQGYPPPYAPQYAQPPPQQQSSGPGCLEGCLAALCCCCLLDACF

XP_011652909.1 cysteine-rich and transmembrane domain-containing protein WIH2 [Cucumis sativus]4.5e-4298.9Show/hide
Query:  MSYYNQGQPPIGVPPPQGYPPEGYPKDAYPPPGYPPQGYPPPGAYPPQGYPPPYAPQYAQPPPQQQ-SSGPGCLEGCLAALCCCCLLDACF
        MSYYNQGQPPIGVPPPQGYPPEGYPKDAYPPPGYPPQGYPPPGAYPPQGYPPPYAPQYAQPPPQQQ SSGPGCLEGCLAALCCCCLLDACF
Subjt:  MSYYNQGQPPIGVPPPQGYPPEGYPKDAYPPPGYPPQGYPPPGAYPPQGYPPPYAPQYAQPPPQQQ-SSGPGCLEGCLAALCCCCLLDACF

XP_012093141.1 cysteine-rich and transmembrane domain-containing protein WIH2 [Jatropha curcas]2.5e-3788.54Show/hide
Query:  MSYYNQGQPPIGVPPPQGYPPEGYPKDAYPPPGYPPQGYP---PPGAYPPQGYPPP---YAPQYAQPPPQQQSSGPGCLEGCLAALCCCCLLDACF
        MSYYNQ QPP+GVPPPQGYPPEGYPKDAYPPPGYPPQGYP   PP  YPPQGYPPP   YAPQY QPPPQQQSSGPGCLEGCLAALCCCCLLDACF
Subjt:  MSYYNQGQPPIGVPPPQGYPPEGYPKDAYPPPGYPPQGYP---PPGAYPPQGYPPP---YAPQYAQPPPQQQSSGPGCLEGCLAALCCCCLLDACF

XP_022149329.1 cysteine-rich and transmembrane domain-containing protein WIH2-like [Momordica charantia]2.7e-3991.58Show/hide
Query:  MSYYNQGQPPIGVPPPQGYPPEGYPKDA-----YPPPGYPPQGYPPPGAYPPQGYPPPYAPQYAQPPPQQQSSGPGCLEGCLAALCCCCLLDACF
        MSYYNQGQPPIGVPPPQGYPPEGYPKDA     YPP GYPPQGYPPPGAYP QGYPPPYAPQY QPPPQQQSSGPGCLEGCLAALCCCCLLDACF
Subjt:  MSYYNQGQPPIGVPPPQGYPPEGYPKDA-----YPPPGYPPQGYPPPGAYPPQGYPPPYAPQYAQPPPQQQSSGPGCLEGCLAALCCCCLLDACF

XP_038905303.1 cysteine-rich and transmembrane domain-containing protein WIH2-like [Benincasa hispida]1.9e-4096.7Show/hide
Query:  MSYYNQGQPPIGVPPPQGYPPEGYPKDAYPPPGYPPQGYPPPGAYPPQGYPPPYAPQYAQPPPQQQ-SSGPGCLEGCLAALCCCCLLDACF
        MSYYNQGQPPIGVPPPQGYPPEGYPKDAYPPPGYPPQGYPPPGAYPP GYPPPYAPQYAQ PPQQQ SSGPGCLEGCLAALCCCCLLDACF
Subjt:  MSYYNQGQPPIGVPPPQGYPPEGYPKDAYPPPGYPPQGYPPPGAYPPQGYPPPYAPQYAQPPPQQQ-SSGPGCLEGCLAALCCCCLLDACF

TrEMBL top hitse value%identityAlignment
A0A0A0KWC5 Uncharacterized protein2.2e-4298.9Show/hide
Query:  MSYYNQGQPPIGVPPPQGYPPEGYPKDAYPPPGYPPQGYPPPGAYPPQGYPPPYAPQYAQPPPQQQ-SSGPGCLEGCLAALCCCCLLDACF
        MSYYNQGQPPIGVPPPQGYPPEGYPKDAYPPPGYPPQGYPPPGAYPPQGYPPPYAPQYAQPPPQQQ SSGPGCLEGCLAALCCCCLLDACF
Subjt:  MSYYNQGQPPIGVPPPQGYPPEGYPKDAYPPPGYPPQGYPPPGAYPPQGYPPPYAPQYAQPPPQQQ-SSGPGCLEGCLAALCCCCLLDACF

A0A1S3BZB4 cysteine-rich and transmembrane domain-containing protein A-like8.8e-44100Show/hide
Query:  MSYYNQGQPPIGVPPPQGYPPEGYPKDAYPPPGYPPQGYPPPGAYPPQGYPPPYAPQYAQPPPQQQSSGPGCLEGCLAALCCCCLLDACF
        MSYYNQGQPPIGVPPPQGYPPEGYPKDAYPPPGYPPQGYPPPGAYPPQGYPPPYAPQYAQPPPQQQSSGPGCLEGCLAALCCCCLLDACF
Subjt:  MSYYNQGQPPIGVPPPQGYPPEGYPKDAYPPPGYPPQGYPPPGAYPPQGYPPPYAPQYAQPPPQQQSSGPGCLEGCLAALCCCCLLDACF

A0A6J1D5E9 cysteine-rich and transmembrane domain-containing protein WIH2-like1.3e-3991.58Show/hide
Query:  MSYYNQGQPPIGVPPPQGYPPEGYPKDA-----YPPPGYPPQGYPPPGAYPPQGYPPPYAPQYAQPPPQQQSSGPGCLEGCLAALCCCCLLDACF
        MSYYNQGQPPIGVPPPQGYPPEGYPKDA     YPP GYPPQGYPPPGAYP QGYPPPYAPQY QPPPQQQSSGPGCLEGCLAALCCCCLLDACF
Subjt:  MSYYNQGQPPIGVPPPQGYPPEGYPKDA-----YPPPGYPPQGYPPPGAYPPQGYPPPYAPQYAQPPPQQQSSGPGCLEGCLAALCCCCLLDACF

A0A6J1JI08 cysteine-rich and transmembrane domain-containing protein WIH2-like1.4e-3689.01Show/hide
Query:  MSYYNQGQPPIGVPPPQGYPPEGYPKDAYPPPGYPPQGYPPPGAYPPQGYPPPYAPQYAQPPP-QQQSSGPGCLEGCLAALCCCCLLDACF
        MSYYNQGQPP+GVPPPQGYPPEGYPKDA     YPPQGYPPPG+YPPQGYPPPYAPQYAQPPP QQQ+SGPGC+EGCLAALCCCCLLDACF
Subjt:  MSYYNQGQPPIGVPPPQGYPPEGYPKDAYPPPGYPPQGYPPPGAYPPQGYPPPYAPQYAQPPP-QQQSSGPGCLEGCLAALCCCCLLDACF

A0A7N0T4L0 Uncharacterized protein2.7e-3791.11Show/hide
Query:  MSYYNQGQPPIGVPPPQGYPPEGYPKDAYPPPGYPPQGYPPPGAYPPQGYPPPYAPQYAQPPPQQQSSGPGCLEGCLAALCCCCLLDACF
        MSYYNQGQPPIGVPP QGYPPEGYPKDAYPPPGYP  GYPP   YPPQGYPP YAPQY QPPPQQQSSGPGCLEGCLAALCCCCLLDACF
Subjt:  MSYYNQGQPPIGVPPPQGYPPEGYPKDAYPPPGYPPQGYPPPGAYPPQGYPPPYAPQYAQPPPQQQSSGPGCLEGCLAALCCCCLLDACF

SwissProt top hitse value%identityAlignment
A5PLE2 Cysteine-rich and transmembrane domain-containing protein 16.3e-0740.87Show/hide
Query:  NQGQPP--IGVPPPQGYPPEGYPKDAYPPPGYPPQGYPPPGAYPPQGYPPPYAPQYAQPPPQQQSSGPG------------------------------C
        N  QPP   G  P  GYP +GYP   YP  GYP QGYPP G YP QGYP    P Y   PP   ++ PG                              C
Subjt:  NQGQPP--IGVPPPQGYPPEGYPKDAYPPPGYPPQGYPPPGAYPPQGYPPPYAPQYAQPPPQQQSSGPG------------------------------C

Query:  LEGCLAALCCCCLLD
        L  C AALCCCCL D
Subjt:  LEGCLAALCCCCLLD

P31356 Rhodopsin1.7e-0763.33Show/hide
Query:  MSYYNQGQPPIG-VPPPQGYPPEGYPKDAYPPPGYPPQGYPPP--GAYPPQGYPPPYAPQ
        M       PP G  PPPQGYPP+GYP   YPP GYPPQGYPPP  GA PPQG PP   PQ
Subjt:  MSYYNQGQPPIG-VPPPQGYPPEGYPKDAYPPPGYPPQGYPPP--GAYPPQGYPPPYAPQ

Q8LCL8 Cysteine-rich and transmembrane domain-containing protein B4.0e-1761Show/hide
Query:  NQGQPPIGVPPPQGYPPEGYPKDAYPPPG--YPPQGYPPPGAYPPQGYPPP-YAPQ------YAQ---PPPQQQSS--GPGCLEGCLAALCCCCLLDACF
        +Q  P +GVPP   YP EG PKDAYPPPG  YP QGYPPP  YP QGYPP  Y PQ      Y Q   PP QQQ     PG LEGC+AALCC C+LDACF
Subjt:  NQGQPPIGVPPPQGYPPEGYPKDAYPPPG--YPPQGYPPPGAYPPQGYPPP-YAPQ------YAQ---PPPQQQSS--GPGCLEGCLAALCCCCLLDACF

Q8S8M0 Cysteine-rich and transmembrane domain-containing protein WIH25.3e-3075Show/hide
Query:  MSYYNQGQPPIGVPPPQGYPPEGYPKDAYPPPGYPPQGYP---------PPGAYPPQGYPPPYAPQYAQPPP-QQQSSGPGCLEGCLAALCCCCLLDACF
        MS YN  QPP+GVPPPQGYPPEGYPKDAYPP GYPPQGYP         P   YP QGYPPPYAPQY  PP  QQQ S PG LEGCLAALCCCCLLDACF
Subjt:  MSYYNQGQPPIGVPPPQGYPPEGYPKDAYPPPGYPPQGYP---------PPGAYPPQGYPPPYAPQYAQPPP-QQQSSGPGCLEGCLAALCCCCLLDACF

Q9FJW3 Cysteine-rich and transmembrane domain-containing protein WIH15.9e-2167.78Show/hide
Query:  YNQGQPPIGVPPPQGYPPEGYPKDAYPPPGYPPQGYPPPG---AYPPQGYPPPYAPQYAQPPPQQQSSGPGCLEGCLAALCCCCLLDACF
        Y+Q Q P+G PPPQGYP    PKD YPP GYPP GYPPPG    YP QGYPP   PQY+Q P Q+Q++  G LEGCLAALCCCCLLDACF
Subjt:  YNQGQPPIGVPPPQGYPPEGYPKDAYPPPGYPPQGYPPPG---AYPPQGYPPPYAPQYAQPPPQQQSSGPGCLEGCLAALCCCCLLDACF

Arabidopsis top hitse value%identityAlignment
AT2G41420.1 proline-rich family protein3.8e-3175Show/hide
Query:  MSYYNQGQPPIGVPPPQGYPPEGYPKDAYPPPGYPPQGYP---------PPGAYPPQGYPPPYAPQYAQPPP-QQQSSGPGCLEGCLAALCCCCLLDACF
        MS YN  QPP+GVPPPQGYPPEGYPKDAYPP GYPPQGYP         P   YP QGYPPPYAPQY  PP  QQQ S PG LEGCLAALCCCCLLDACF
Subjt:  MSYYNQGQPPIGVPPPQGYPPEGYPKDAYPPPGYPPQGYP---------PPGAYPPQGYPPPYAPQYAQPPP-QQQSSGPGCLEGCLAALCCCCLLDACF

AT3G49845.1 unknown protein3.8e-1547.54Show/hide
Query:  YNQGQPPIGVPPPQGYPP-EGYPKDAYPPP-----------GYPPQGYPPP-----GAYPPQGYPPPYAPQ-------YAQPPPQQQSSGP---------
        Y   Q P+  PPPQGYPP EGYP   YPPP           GYPP GYPPP       YP QGYPPP  PQ       Y  PPP      P         
Subjt:  YNQGQPPIGVPPPQGYPP-EGYPKDAYPPP-----------GYPPQGYPPP-----GAYPPQGYPPPYAPQ-------YAQPPPQQQSSGP---------

Query:  --GCLEGCLAALCCCCLLDACF
          G +EGCLA LCCC LL+ACF
Subjt:  --GCLEGCLAALCCCCLLDACF

AT5G45350.1 proline-rich family protein1.0e-0762.3Show/hide
Query:  GQPPIGVPPPQGYPPEGYPKDAYPPP--GYPPQGYPPPGAYPPQ--GYPPPYAPQYAQPPP
        G PP G PPP  YPP GYP+  YPPP   YPP GY PPGAYPP   GYPP  AP Y   PP
Subjt:  GQPPIGVPPPQGYPPEGYPKDAYPPP--GYPPQGYPPPGAYPPQ--GYPPPYAPQYAQPPP

AT5G45350.2 proline-rich family protein1.0e-0762.3Show/hide
Query:  GQPPIGVPPPQGYPPEGYPKDAYPPP--GYPPQGYPPPGAYPPQ--GYPPPYAPQYAQPPP
        G PP G PPP  YPP GYP+  YPPP   YPP GY PPGAYPP   GYPP  AP Y   PP
Subjt:  GQPPIGVPPPQGYPPEGYPKDAYPPP--GYPPQGYPPPGAYPPQ--GYPPPYAPQYAQPPP

AT5G67600.1 unknown protein4.2e-2267.78Show/hide
Query:  YNQGQPPIGVPPPQGYPPEGYPKDAYPPPGYPPQGYPPPG---AYPPQGYPPPYAPQYAQPPPQQQSSGPGCLEGCLAALCCCCLLDACF
        Y+Q Q P+G PPPQGYP    PKD YPP GYPP GYPPPG    YP QGYPP   PQY+Q P Q+Q++  G LEGCLAALCCCCLLDACF
Subjt:  YNQGQPPIGVPPPQGYPPEGYPKDAYPPPGYPPQGYPPPG---AYPPQGYPPPYAPQYAQPPPQQQSSGPGCLEGCLAALCCCCLLDACF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTTATTATAATCAAGGTCAGCCTCCGATTGGAGTGCCTCCACCTCAAGGTTATCCACCGGAAGGTTATCCGAAGGATGCTTATCCGCCGCCGGGATATCCTCCGCA
GGGCTATCCTCCTCCTGGTGCTTATCCGCCGCAGGGATATCCTCCGCCTTACGCTCCTCAGTACGCTCAGCCTCCTCCTCAACAGCAAAGTAGCGGCCCTGGTTGCTTGG
AAGGCTGTTTGGCTGCGCTGTGCTGTTGCTGCTTGCTTGACGCGTGCTTCTGA
mRNA sequenceShow/hide mRNA sequence
AAACTGATTAGAGATAAAACCTTCCCGGATTAGCCGCAAACAAACACAACCTTCTCTCTCGGTAATCTCAGCTCTGTTTTCGGATTATATATATAAATCCTTCACATCCC
ACTCTTCTTCTCTGTCCATTCTACACCTTCGCTGTCTTCTCCATTGACTCTTTCTCCTTCTCTCTCTTCACTTTTTCTTTTGTTTCTCTGAATTCCGGCCGCTTTTATCG
ACGGGATTGGAATTGGTTTTCCTTTTGTTGAGAAGGGAGATCTGTTGTTGATTTGAACAGGAAGAACAAGGGATGAGTTATTATAATCAAGGTCAGCCTCCGATTGGAGT
GCCTCCACCTCAAGGTTATCCACCGGAAGGTTATCCGAAGGATGCTTATCCGCCGCCGGGATATCCTCCGCAGGGCTATCCTCCTCCTGGTGCTTATCCGCCGCAGGGAT
ATCCTCCGCCTTACGCTCCTCAGTACGCTCAGCCTCCTCCTCAACAGCAAAGTAGCGGCCCTGGTTGCTTGGAAGGCTGTTTGGCTGCGCTGTGCTGTTGCTGCTTGCTT
GACGCGTGCTTCTGAAGAAAACCAGTTGAATGTGCTATGCTTTCAAATTTAAGAGCGATTCCTCAGTAAAACTTTTCCCTGAAAGAAAAAGAGAAAAAAAAAAAAAAATT
GAAACAATTGGAGTTGTTTATGATTTGGGGCTTCATTGTGAAGTTCTAAAATTTCTTGCGTTTATTAATTATTATATAGTCTAGTGTTTGTTCTTCTTTGCCTTCTCCCT
CCCTTTACACATTTTTCTTATATAAATAACACCATCTCTCTCTCTC
Protein sequenceShow/hide protein sequence
MSYYNQGQPPIGVPPPQGYPPEGYPKDAYPPPGYPPQGYPPPGAYPPQGYPPPYAPQYAQPPPQQQSSGPGCLEGCLAALCCCCLLDACF