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CcUC10G195280 (gene) of Watermelon (PI 537277) v1 genome

Gene IDCcUC10G195280
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionBRCT domain-containing protein
Genome locationCicolChr10:20398924..20400872
RNA-Seq ExpressionCcUC10G195280
SyntenyCcUC10G195280
Gene Ontology termsGO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CDY43313.1 BnaC03g58850D [Brassica napus]1.2e-0460Show/hide
Query:  GIWSSGMILASGARGPEFDSRNAPTYFW-----LPFPNINFQAPGVPVNF
        GIWSSGMILA GARGPEFDSRNAP  F+     L      F +   PVNF
Subjt:  GIWSSGMILASGARGPEFDSRNAPTYFW-----LPFPNINFQAPGVPVNF
EOX94920.1 Uncharacterized protein TCM_004519 [Theobroma cacao]6.9e-0583.33Show/hide
Query:  KQGIWSSGMILASGARGPEFDSRNAPTYFW
        ++G+WSSGMILA GARGPEFDSRNAP YFW
Subjt:  KQGIWSSGMILASGARGPEFDSRNAPTYFW
PWA72192.1 tetratricopeptide-like helical domain, DYW domain protein [Artemisia annua]6.9e-0577.14Show/hide
Query:  KQGIWSSGMILASGARGPEFDSRNAPTYFWLPFPN
        + G+WSSGMILASGARGPEFDSRNAP  F+L F N
Subjt:  KQGIWSSGMILASGARGPEFDSRNAPTYFWLPFPN
VDC97967.1 unnamed protein product [Brassica oleracea]1.2e-0460Show/hide
Query:  GIWSSGMILASGARGPEFDSRNAPTYFW-----LPFPNINFQAPGVPVNF
        GIWSSGMILA GARGPEFDSRNAP  F+     L      F +   PVNF
Subjt:  GIWSSGMILASGARGPEFDSRNAPTYFW-----LPFPNINFQAPGVPVNF
VDD06315.1 unnamed protein product [Brassica rapa]1.5e-0458Show/hide
Query:  GIWSSGMILASGARGPEFDSRNAPTYFW-----LPFPNINFQAPGVPVNF
        GIWSSGMILA GARGPEFDSRNAP  F+     L      F +   P+NF
Subjt:  GIWSSGMILASGARGPEFDSRNAPTYFW-----LPFPNINFQAPGVPVNF
TrEMBL top hitse value%identityAlignment
A0A061DQC8 Uncharacterized protein3.3e-0583.33Show/hide
Query:  KQGIWSSGMILASGARGPEFDSRNAPTYFW
        ++G+WSSGMILA GARGPEFDSRNAP YFW
Subjt:  KQGIWSSGMILASGARGPEFDSRNAPTYFW
A0A078I2F6 BnaC03g58850D protein5.7e-0560Show/hide
Query:  GIWSSGMILASGARGPEFDSRNAPTYFW-----LPFPNINFQAPGVPVNF
        GIWSSGMILA GARGPEFDSRNAP  F+     L      F +   PVNF
Subjt:  GIWSSGMILASGARGPEFDSRNAPTYFW-----LPFPNINFQAPGVPVNF
A0A2U1NF93 Tetratricopeptide-like helical domain, DYW domain protein3.3e-0577.14Show/hide
Query:  KQGIWSSGMILASGARGPEFDSRNAPTYFWLPFPN
        + G+WSSGMILASGARGPEFDSRNAP  F+L F N
Subjt:  KQGIWSSGMILASGARGPEFDSRNAPTYFWLPFPN
A0A3P6B491 Uncharacterized protein5.7e-0560Show/hide
Query:  GIWSSGMILASGARGPEFDSRNAPTYFW-----LPFPNINFQAPGVPVNF
        GIWSSGMILA GARGPEFDSRNAP  F+     L      F +   PVNF
Subjt:  GIWSSGMILASGARGPEFDSRNAPTYFW-----LPFPNINFQAPGVPVNF
A0A3P6C6M7 Uncharacterized protein7.4e-0558Show/hide
Query:  GIWSSGMILASGARGPEFDSRNAPTYFW-----LPFPNINFQAPGVPVNF
        GIWSSGMILA GARGPEFDSRNAP  F+     L      F +   P+NF
Subjt:  GIWSSGMILASGARGPEFDSRNAPTYFW-----LPFPNINFQAPGVPVNF
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTCAAACAGGGCATTTGGTCTAGTGGTATGATTCTCGCTTCGGGTGCTAGAGGTCCCGAGTTCGATTCTCGGAATGCCCCAACATATTTTTGGTTACCATTTCCCAA
TATTAACTTCCAAGCCCCAGGTGTTCCAGTCAATTTTTCAATTCAATTGGCAAATAAACTACAGATGCTTCAGAGATTATGCTCTGCTACTGCCCTCCCAAAATTCAGCA
GATTCTCAGGCAATAAAGCAGCCGCAAACTAG
mRNA sequenceShow/hide mRNA sequence
ATGCTCAAACAGGGCATTTGGTCTAGTGGTATGATTCTCGCTTCGGGTGCTAGAGGTCCCGAGTTCGATTCTCGGAATGCCCCAACATATTTTTGGTTACCATTTCCCAA
TATTAACTTCCAAGCCCCAGGTGTTCCAGTCAATTTTTCAATTCAATTGGCAAATAAACTACAGATGCTTCAGAGATTATGCTCTGCTACTGCCCTCCCAAAATTCAGCA
GATTCTCAGGCAATAAAGCAGCCGCAAACTAG
Protein sequenceShow/hide protein sequence
MLKQGIWSSGMILASGARGPEFDSRNAPTYFWLPFPNINFQAPGVPVNFSIQLANKLQMLQRLCSATALPKFSRFSGNKAAAN