; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CcUC10G197100 (gene) of Watermelon (PI 537277) v1 genome

Gene IDCcUC10G197100
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
Description60S ribosomal protein L44
Genome locationCicolChr10:23657644..23658366
RNA-Seq ExpressionCcUC10G197100
SyntenyCcUC10G197100
Gene Ontology termsGO:0005840 - ribosome (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR040411 - Uncharacterized protein At5g23160-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0052773.1 60S ribosomal protein L44 [Cucumis melo var. makuwa]1.6e-8674.38Show/hide
Query:  MAESSDKIPPSKSRPHFLLRCFRSSPKLHPKKPSPIAPRNRRTFSLSFRFKKSSATVPVDTAVPSHNELSFSPDFKKPPPLPLITPRTPAVGGEIVVDSG
        MA+SS K PPSKS   FL  CFRSS KL  KKPS IAPRNRRTFSL+FRFKKSSATVPVD A PSH+ELSFSPDFKKPPPL LITP+ P V GEIVVDSG
Subjt:  MAESSDKIPPSKSRPHFLLRCFRSSPKLHPKKPSPIAPRNRRTFSLSFRFKKSSATVPVDTAVPSHNELSFSPDFKKPPPLPLITPRTPAVGGEIVVDSG

Query:  CKPIKPSQTRKKSESTQSNFTAEKLSPVKKTTALLHSVSLPSQLLNRQNDLKKSVS-HLPAAVATIAPAFSDRHKPAPNLPTNSPAKNFDRVIVIVMVAI
         + +KPSQTRKK ESTQSNFT +KLSP +K  A LHSVS PSQLL RQ D K+SVS HLPAAVAT +PAFSD +KP P L TN P KN DRVI++VMVAI
Subjt:  CKPIKPSQTRKKSESTQSNFTAEKLSPVKKTTALLHSVSLPSQLLNRQNDLKKSVS-HLPAAVATIAPAFSDRHKPAPNLPTNSPAKNFDRVIVIVMVAI

Query:  VVLWGRLCAILCTAALFYLRRRLRSEI-VPEGSGRGGLGGIS
        +VLWGRLCAILCT ALFYL RR+RSE+ V  G GRGG GG S
Subjt:  VVLWGRLCAILCTAALFYLRRRLRSEI-VPEGSGRGGLGGIS

KAG6606901.1 60S ribosomal protein L44, partial [Cucurbita argyrosperma subsp. sororia]5.9e-5759.07Show/hide
Query:  MAESSDKIPPSKSRPHFLLRCFRSSPKLHPKKPSPIAPRNRRTFSLSFRFKKSSATVPVDTAVPS-----HNELSFSPDFKKPPPLPLITPRTPAVGGEI
        MAE+S+K+ PSK   HFLLRCF SSPK+  KK       + R  S  FRFKKSSATVP+D AVP       ++ SFSP+FKKPPP PLI  R P V  +I
Subjt:  MAESSDKIPPSKSRPHFLLRCFRSSPKLHPKKPSPIAPRNRRTFSLSFRFKKSSATVPVDTAVPS-----HNELSFSPDFKKPPPLPLITPRTPAVGGEI

Query:  VVDSGCKPIKPSQTRKKSESTQSNFTAEKLSPVKKTTALLHSVSLPSQLLNRQNDLKKSVSHLPAAVATIAPAFSDRHKPAPNLPTNSPAKNFDRVIVIV
        V     + IKPSQT KK+EST+     + L+P K+T ALLHS+SLPS+ LNRQ DLKK+VSHL +AV T  P  S+R KPA   P NSPAK  D +IVIV
Subjt:  VVDSGCKPIKPSQTRKKSESTQSNFTAEKLSPVKKTTALLHSVSLPSQLLNRQNDLKKSVSHLPAAVATIAPAFSDRHKPAPNLPTNSPAKNFDRVIVIV

Query:  MVAIVVLWGRLCAILCTAALFYLRRRLRSEIVPEGSG
         VAIVVLWG+LCAILCT ALFY  RRLRSE   EG G
Subjt:  MVAIVVLWGRLCAILCTAALFYLRRRLRSEIVPEGSG

KGN58547.1 hypothetical protein Csa_002056 [Cucumis sativus]3.8e-8071.19Show/hide
Query:  MAESSDKIPPSKSRPHFLLRCFRSSPKLHPKKPSPIAPRNRRTFSLSFRFKKSSATVPVDTAVPSHNELSFSPDFKKPPPLPLITPRTPAVGGEIVVDSG
        MA+SS+ IPPSKS  HFL  CFRSS KL  KK S IAPR RRT S +FRFKKSSATVPVD A PSH+ELSF P+FKK PPL  I P+ P VGGEIVVDS 
Subjt:  MAESSDKIPPSKSRPHFLLRCFRSSPKLHPKKPSPIAPRNRRTFSLSFRFKKSSATVPVDTAVPSHNELSFSPDFKKPPPLPLITPRTPAVGGEIVVDSG

Query:  CKPIKPSQTRKKSESTQSNFTAEKLSPVKKTTALLHSVSLPSQLLNRQNDLKKSVS-HLPAAVATIAPAFSDRHKPAPNLPTNSPAKNFDRVIVIVMVAI
           +KPSQTRKK  STQSNFT +KLSP +KT ALLHSVSLPSQ L RQ   KK VS HLPAAVAT +PAFSD +KP P LPT  P KNFDRVI++V+VAI
Subjt:  CKPIKPSQTRKKSESTQSNFTAEKLSPVKKTTALLHSVSLPSQLLNRQNDLKKSVS-HLPAAVATIAPAFSDRHKPAPNLPTNSPAKNFDRVIVIVMVAI

Query:  VVLWGRLCAILCTAALFYLRRRLRSEIVPE--GSGRGGLGGIS
        V+LWGRLCAILCT ALFYL RR+RSEI P+  GSGRG L G S
Subjt:  VVLWGRLCAILCTAALFYLRRRLRSEIVPE--GSGRGGLGGIS

XP_022949237.1 uncharacterized protein LOC111452650 [Cucurbita moschata]1.2e-5759.49Show/hide
Query:  MAESSDKIPPSKSRPHFLLRCFRSSPKLHPKKPSPIAPRNRRTFSLSFRFKKSSATVPVDTAVPS-----HNELSFSPDFKKPPPLPLITPRTPAVGGEI
        MAE+S+K+ PSK   HFLLRCF SSPK+  KK      R+ R  S  FRFKKSSATVP+D AVP       ++ SFSP+FKKPPP PLI  R P V  +I
Subjt:  MAESSDKIPPSKSRPHFLLRCFRSSPKLHPKKPSPIAPRNRRTFSLSFRFKKSSATVPVDTAVPS-----HNELSFSPDFKKPPPLPLITPRTPAVGGEI

Query:  VVDSGCKPIKPSQTRKKSESTQSNFTAEKLSPVKKTTALLHSVSLPSQLLNRQNDLKKSVSHLPAAVATIAPAFSDRHKPAPNLPTNSPAKNFDRVIVIV
        V     + IKPSQ  KK+EST+S+F    L+P K+T ALLHS+SLPS+ LNRQ D KK+VSHL +AV T  P  S+R KPA   P NSPAK  D +IVIV
Subjt:  VVDSGCKPIKPSQTRKKSESTQSNFTAEKLSPVKKTTALLHSVSLPSQLLNRQNDLKKSVSHLPAAVATIAPAFSDRHKPAPNLPTNSPAKNFDRVIVIV

Query:  MVAIVVLWGRLCAILCTAALFYLRRRLRSEIVPEGSG
         VAIVVLWG+LCAILCT ALFY  RRLRSE   EG G
Subjt:  MVAIVVLWGRLCAILCTAALFYLRRRLRSEIVPEGSG

XP_022982640.1 uncharacterized protein LOC111481455 [Cucurbita maxima]2.2e-5659Show/hide
Query:  MAESSDKIPPSKSRPHFLLRCFRSSPKLHPKKPSPIAPRNRRTFSLSFRFKKSSATVPVDTAVPSHNELSFSPDFKKPPPLPLITPRTPAVGGEIVVDSG
        MAESSD     K R HFL RCFRSSP +  +K   IA  NRRT SL FRFKK SATVP+D AVP H+ELSFSP+F  PPP          + GEI+VDSG
Subjt:  MAESSDKIPPSKSRPHFLLRCFRSSPKLHPKKPSPIAPRNRRTFSLSFRFKKSSATVPVDTAVPSHNELSFSPDFKKPPPLPLITPRTPAVGGEIVVDSG

Query:  CKPIKPSQTRKKSESTQSNFTAEKLSPVKKTTALLHSVSLPSQLLNRQNDLKKSVSHLPAAVATIAPAFSDRHKPAPNLPTNSPAKNFDRVIVIVMVAIV
        CK IK S+TRKKSESTQSN T EKL P KKT+  LHS          +  LKKS+SHLP AVA   P  S     +   PTNSP   FD V VIV VAIV
Subjt:  CKPIKPSQTRKKSESTQSNFTAEKLSPVKKTTALLHSVSLPSQLLNRQNDLKKSVSHLPAAVATIAPAFSDRHKPAPNLPTNSPAKNFDRVIVIVMVAIV

Query:  VLWGRLCAILCTAALFYLRRRLRS----EIVPEGSGRGG
        VLWGRLCAILCTAALFYLRR LRS    ++V +G G  G
Subjt:  VLWGRLCAILCTAALFYLRRRLRS----EIVPEGSGRGG

TrEMBL top hitse value%identityAlignment
A0A0A0LCZ2 Uncharacterized protein1.8e-8071.19Show/hide
Query:  MAESSDKIPPSKSRPHFLLRCFRSSPKLHPKKPSPIAPRNRRTFSLSFRFKKSSATVPVDTAVPSHNELSFSPDFKKPPPLPLITPRTPAVGGEIVVDSG
        MA+SS+ IPPSKS  HFL  CFRSS KL  KK S IAPR RRT S +FRFKKSSATVPVD A PSH+ELSF P+FKK PPL  I P+ P VGGEIVVDS 
Subjt:  MAESSDKIPPSKSRPHFLLRCFRSSPKLHPKKPSPIAPRNRRTFSLSFRFKKSSATVPVDTAVPSHNELSFSPDFKKPPPLPLITPRTPAVGGEIVVDSG

Query:  CKPIKPSQTRKKSESTQSNFTAEKLSPVKKTTALLHSVSLPSQLLNRQNDLKKSVS-HLPAAVATIAPAFSDRHKPAPNLPTNSPAKNFDRVIVIVMVAI
           +KPSQTRKK  STQSNFT +KLSP +KT ALLHSVSLPSQ L RQ   KK VS HLPAAVAT +PAFSD +KP P LPT  P KNFDRVI++V+VAI
Subjt:  CKPIKPSQTRKKSESTQSNFTAEKLSPVKKTTALLHSVSLPSQLLNRQNDLKKSVS-HLPAAVATIAPAFSDRHKPAPNLPTNSPAKNFDRVIVIVMVAI

Query:  VVLWGRLCAILCTAALFYLRRRLRSEIVPE--GSGRGGLGGIS
        V+LWGRLCAILCT ALFYL RR+RSEI P+  GSGRG L G S
Subjt:  VVLWGRLCAILCTAALFYLRRRLRSEIVPE--GSGRGGLGGIS

A0A5A7UA28 60S ribosomal protein L447.7e-8774.38Show/hide
Query:  MAESSDKIPPSKSRPHFLLRCFRSSPKLHPKKPSPIAPRNRRTFSLSFRFKKSSATVPVDTAVPSHNELSFSPDFKKPPPLPLITPRTPAVGGEIVVDSG
        MA+SS K PPSKS   FL  CFRSS KL  KKPS IAPRNRRTFSL+FRFKKSSATVPVD A PSH+ELSFSPDFKKPPPL LITP+ P V GEIVVDSG
Subjt:  MAESSDKIPPSKSRPHFLLRCFRSSPKLHPKKPSPIAPRNRRTFSLSFRFKKSSATVPVDTAVPSHNELSFSPDFKKPPPLPLITPRTPAVGGEIVVDSG

Query:  CKPIKPSQTRKKSESTQSNFTAEKLSPVKKTTALLHSVSLPSQLLNRQNDLKKSVS-HLPAAVATIAPAFSDRHKPAPNLPTNSPAKNFDRVIVIVMVAI
         + +KPSQTRKK ESTQSNFT +KLSP +K  A LHSVS PSQLL RQ D K+SVS HLPAAVAT +PAFSD +KP P L TN P KN DRVI++VMVAI
Subjt:  CKPIKPSQTRKKSESTQSNFTAEKLSPVKKTTALLHSVSLPSQLLNRQNDLKKSVS-HLPAAVATIAPAFSDRHKPAPNLPTNSPAKNFDRVIVIVMVAI

Query:  VVLWGRLCAILCTAALFYLRRRLRSEI-VPEGSGRGGLGGIS
        +VLWGRLCAILCT ALFYL RR+RSE+ V  G GRGG GG S
Subjt:  VVLWGRLCAILCTAALFYLRRRLRSEI-VPEGSGRGGLGGIS

A0A6J1F3C2 uncharacterized protein LOC1114417601.1e-5659.59Show/hide
Query:  MAESSDKIPPSKSRPHFLLRCFRSSPKLHPKKPSPIAPRNRRTFSLSFRFKKSSATVPVDTAVPSHNELSFSPDFKKPPPLPLITPRTPAVGGEIVVDSG
        MAESSD     K R HFL RCFRSSP +  +K  PIA  NRRT SL FRFKKSSATVP+D AVP H+ELS SP+F  PPP PLI        GEI+VDSG
Subjt:  MAESSDKIPPSKSRPHFLLRCFRSSPKLHPKKPSPIAPRNRRTFSLSFRFKKSSATVPVDTAVPSHNELSFSPDFKKPPPLPLITPRTPAVGGEIVVDSG

Query:  CKPIKPSQTRKKSESTQSN----FTAEKLSPVKKTTALLHSVSLPSQLLNRQNDLKKSVSHLPAAVATIAPAF--SDRHKPAPNLPTNSPAKNFDRVIVI
        CK IKPS+TRKKSESTQSN     T    +  KKT+  LHS          +  LKKS+SHLP A A +  +   SDR KP    PTNSP K FD VIVI
Subjt:  CKPIKPSQTRKKSESTQSN----FTAEKLSPVKKTTALLHSVSLPSQLLNRQNDLKKSVSHLPAAVATIAPAF--SDRHKPAPNLPTNSPAKNFDRVIVI

Query:  VMVAIVVLWGRLCAILCTAALFYLRRRLRS----EIVPEGSGRGG
        V VAIVVLWGRLCAILCTAALFYLRR LRS    ++V  G G  G
Subjt:  VMVAIVVLWGRLCAILCTAALFYLRRRLRS----EIVPEGSGRGG

A0A6J1GBH7 uncharacterized protein LOC1114526505.7e-5859.49Show/hide
Query:  MAESSDKIPPSKSRPHFLLRCFRSSPKLHPKKPSPIAPRNRRTFSLSFRFKKSSATVPVDTAVPS-----HNELSFSPDFKKPPPLPLITPRTPAVGGEI
        MAE+S+K+ PSK   HFLLRCF SSPK+  KK      R+ R  S  FRFKKSSATVP+D AVP       ++ SFSP+FKKPPP PLI  R P V  +I
Subjt:  MAESSDKIPPSKSRPHFLLRCFRSSPKLHPKKPSPIAPRNRRTFSLSFRFKKSSATVPVDTAVPS-----HNELSFSPDFKKPPPLPLITPRTPAVGGEI

Query:  VVDSGCKPIKPSQTRKKSESTQSNFTAEKLSPVKKTTALLHSVSLPSQLLNRQNDLKKSVSHLPAAVATIAPAFSDRHKPAPNLPTNSPAKNFDRVIVIV
        V     + IKPSQ  KK+EST+S+F    L+P K+T ALLHS+SLPS+ LNRQ D KK+VSHL +AV T  P  S+R KPA   P NSPAK  D +IVIV
Subjt:  VVDSGCKPIKPSQTRKKSESTQSNFTAEKLSPVKKTTALLHSVSLPSQLLNRQNDLKKSVSHLPAAVATIAPAFSDRHKPAPNLPTNSPAKNFDRVIVIV

Query:  MVAIVVLWGRLCAILCTAALFYLRRRLRSEIVPEGSG
         VAIVVLWG+LCAILCT ALFY  RRLRSE   EG G
Subjt:  MVAIVVLWGRLCAILCTAALFYLRRRLRSEIVPEGSG

A0A6J1IZW6 uncharacterized protein LOC1114814551.1e-5659Show/hide
Query:  MAESSDKIPPSKSRPHFLLRCFRSSPKLHPKKPSPIAPRNRRTFSLSFRFKKSSATVPVDTAVPSHNELSFSPDFKKPPPLPLITPRTPAVGGEIVVDSG
        MAESSD     K R HFL RCFRSSP +  +K   IA  NRRT SL FRFKK SATVP+D AVP H+ELSFSP+F  PPP          + GEI+VDSG
Subjt:  MAESSDKIPPSKSRPHFLLRCFRSSPKLHPKKPSPIAPRNRRTFSLSFRFKKSSATVPVDTAVPSHNELSFSPDFKKPPPLPLITPRTPAVGGEIVVDSG

Query:  CKPIKPSQTRKKSESTQSNFTAEKLSPVKKTTALLHSVSLPSQLLNRQNDLKKSVSHLPAAVATIAPAFSDRHKPAPNLPTNSPAKNFDRVIVIVMVAIV
        CK IK S+TRKKSESTQSN T EKL P KKT+  LHS          +  LKKS+SHLP AVA   P  S     +   PTNSP   FD V VIV VAIV
Subjt:  CKPIKPSQTRKKSESTQSNFTAEKLSPVKKTTALLHSVSLPSQLLNRQNDLKKSVSHLPAAVATIAPAFSDRHKPAPNLPTNSPAKNFDRVIVIVMVAIV

Query:  VLWGRLCAILCTAALFYLRRRLRS----EIVPEGSGRGG
        VLWGRLCAILCTAALFYLRR LRS    ++V +G G  G
Subjt:  VLWGRLCAILCTAALFYLRRRLRS----EIVPEGSGRGG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGAATCTTCTGACAAAATCCCTCCCTCCAAATCCCGACCCCATTTCCTCCTCCGTTGCTTCCGATCTTCCCCCAAACTTCATCCCAAAAAGCCTTCCCCG
ATCGCCCCACGTAACCGCCGGACTTTCTCGCTTTCCTTCCGATTCAAGAAGTCCTCTGCAACTGTGCCGGTCGACACCGCCGTCCCATCCCACAATGAACTCTCT
TTTTCGCCGGACTTCAAGAAACCGCCTCCCCTGCCGCTGATTACACCCAGAACACCAGCGGTCGGAGGCGAGATCGTCGTGGATTCGGGCTGTAAGCCAATAAAG
CCGAGTCAAACTCGGAAGAAATCCGAGTCAACTCAGTCCAATTTCACGGCGGAGAAACTCTCGCCGGTGAAAAAAACCACCGCGTTGTTGCACTCTGTTTCTCTT
CCCTCTCAACTATTAAACCGCCAGAATGATTTGAAAAAATCTGTCTCTCATCTCCCCGCCGCCGTCGCTACCATCGCGCCGGCGTTCTCAGACCGTCATAAACCG
GCGCCAAATCTGCCGACGAATTCTCCGGCCAAGAATTTCGATCGGGTGATTGTGATTGTTATGGTGGCGATTGTGGTGCTGTGGGGGCGACTCTGCGCCATACTC
TGCACGGCGGCGCTGTTCTACTTGCGACGTCGCCTGAGATCGGAAATCGTACCGGAAGGCAGCGGCAGAGGTGGTTTGGGGGGAATATCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCGGAATCTTCTGACAAAATCCCTCCCTCCAAATCCCGACCCCATTTCCTCCTCCGTTGCTTCCGATCTTCCCCCAAACTTCATCCCAAAAAGCCTTCCCCG
ATCGCCCCACGTAACCGCCGGACTTTCTCGCTTTCCTTCCGATTCAAGAAGTCCTCTGCAACTGTGCCGGTCGACACCGCCGTCCCATCCCACAATGAACTCTCT
TTTTCGCCGGACTTCAAGAAACCGCCTCCCCTGCCGCTGATTACACCCAGAACACCAGCGGTCGGAGGCGAGATCGTCGTGGATTCGGGCTGTAAGCCAATAAAG
CCGAGTCAAACTCGGAAGAAATCCGAGTCAACTCAGTCCAATTTCACGGCGGAGAAACTCTCGCCGGTGAAAAAAACCACCGCGTTGTTGCACTCTGTTTCTCTT
CCCTCTCAACTATTAAACCGCCAGAATGATTTGAAAAAATCTGTCTCTCATCTCCCCGCCGCCGTCGCTACCATCGCGCCGGCGTTCTCAGACCGTCATAAACCG
GCGCCAAATCTGCCGACGAATTCTCCGGCCAAGAATTTCGATCGGGTGATTGTGATTGTTATGGTGGCGATTGTGGTGCTGTGGGGGCGACTCTGCGCCATACTC
TGCACGGCGGCGCTGTTCTACTTGCGACGTCGCCTGAGATCGGAAATCGTACCGGAAGGCAGCGGCAGAGGTGGTTTGGGGGGAATATCTTGA
Protein sequenceShow/hide protein sequence
MAESSDKIPPSKSRPHFLLRCFRSSPKLHPKKPSPIAPRNRRTFSLSFRFKKSSATVPVDTAVPSHNELSFSPDFKKPPPLPLITPRTPAVGGEIVVDSGCKPIK
PSQTRKKSESTQSNFTAEKLSPVKKTTALLHSVSLPSQLLNRQNDLKKSVSHLPAAVATIAPAFSDRHKPAPNLPTNSPAKNFDRVIVIVMVAIVVLWGRLCAIL
CTAALFYLRRRLRSEIVPEGSGRGGLGGIS