| GenBank top hits | e value | %identity | Alignment |
|---|
| KAA0048391.1 RNA polymerase sigma factor sigD [Cucumis melo var. makuwa] | 1.1e-223 | 91.28 | Show/hide |
Query: MATTSSLCSLPTQSPTLPSISLSSLPSLKTHLPQQPHFPFPPFSTKLGSNFISNDTLTLPPPPEAAVLGVEAAREHVLVEARGFSEDWSCKNLERMEESC
MATTSSLCSLP QSPTLPSISLSSLPSLKTHLPQQPHFPFPPFS+KLG NFIS DTLTLPPPPEAAVL VEAA EHVLVEARGFSEDWS KN+ERMEESC
Subjt: MATTSSLCSLPTQSPTLPSISLSSLPSLKTHLPQQPHFPFPPFSTKLGSNFISNDTLTLPPPPEAAVLGVEAAREHVLVEARGFSEDWSCKNLERMEESC
Query: GGDGTVAWKKKRRKRRKEVGVKAEENWVALSSGPLRPGYLSSKEEAELCLCLKEAAQLERAKTRIMETQEHEPTNKQLAIALGTKLGSIDRILCRARESR
GDGTVAWKKKRRKRRKEVGVKAEENW+ALSSGPLRPGYLS KEEAELCLCLKEA LE+ K+RIMETQEHEPTNKQLAIA+GTK G IDRILCRARESR
Subjt: GGDGTVAWKKKRRKRRKEVGVKAEENWVALSSGPLRPGYLSSKEEAELCLCLKEAAQLERAKTRIMETQEHEPTNKQLAIALGTKLGSIDRILCRARESR
Query: DRLIRCYSKLVISIAAPYQGKGLSLQDLTQEGNIGLLKGAERFEPNRGHKLSTYAYWWIRQAIIRALDKNSRLVRLPGYMGQMVARLAEANNHLGIKLSR
DRLIRCYSKLVISIAAPYQGKGLSLQDLTQEGNIGLLKGAERFEP+RGHKLSTYAYWWIRQAIIRALDK SRLVRLPG+MGQMVAR+AE NNHLGIKLSR
Subjt: DRLIRCYSKLVISIAAPYQGKGLSLQDLTQEGNIGLLKGAERFEPNRGHKLSTYAYWWIRQAIIRALDKNSRLVRLPGYMGQMVARLAEANNHLGIKLSR
Query: PPTHKEVAESLKVHVSTVRLVTERSKRPISINQPFNDRGCLTLQEIMPGPDNLTPESMVMRKLMKQELKKLLNTLSKREAHILSLYFGLNGEIPQSFEEI
PPT++EVAESLKV VSTVRLV ERSKRPISINQP NDR CLTLQEI+PGPDNLTPE+MVMRKLMKQELK+LLNTLSKREAHILSLYFGLNGEIPQSFEEI
Subjt: PPTHKEVAESLKVHVSTVRLVTERSKRPISINQPFNDRGCLTLQEIMPGPDNLTPESMVMRKLMKQELKKLLNTLSKREAHILSLYFGLNGEIPQSFEEI
Query: GKSLNLSRETIRKINVATLSKLKKTDILDYLKDYLV
GKSLNLSRETIR+IN+ATLSKLKKT++LDY+KDYLV
Subjt: GKSLNLSRETIRKINVATLSKLKKTDILDYLKDYLV
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| XP_004149725.1 RNA polymerase sigma factor sigD, chloroplastic [Cucumis sativus] | 3.5e-225 | 91.74 | Show/hide |
Query: MATTSSLCSLPTQSPTLPSISLSSLPSLKTHLPQQPHFPFPPFSTKLGSNFISNDTLTLPPPPEAAVLGVEAAREHVLVEARGFSEDWSCKNLERMEESC
MATTSSLCSLP QSPTLPSISLSSLPSLKTHLPQQPHFPFPPFSTKLG N ISNDTLTLPPPPEAAVL VEAA EHVLVEA+GFSEDWS KN+E+MEESC
Subjt: MATTSSLCSLPTQSPTLPSISLSSLPSLKTHLPQQPHFPFPPFSTKLGSNFISNDTLTLPPPPEAAVLGVEAAREHVLVEARGFSEDWSCKNLERMEESC
Query: GGDGTVAWKKKRRKRRKEVGVKAEENWVALSSGPLRPGYLSSKEEAELCLCLKEAAQLERAKTRIMETQEHEPTNKQLAIALGTKLGSIDRILCRARESR
GDGTVAWKKKRRKRRKEVGVKAEENW+ALSSGPLRPGYLS KEEAELCLCLKEA LE KTRIMETQEHEPTNKQLAIA+GTK G IDRILCRARESR
Subjt: GGDGTVAWKKKRRKRRKEVGVKAEENWVALSSGPLRPGYLSSKEEAELCLCLKEAAQLERAKTRIMETQEHEPTNKQLAIALGTKLGSIDRILCRARESR
Query: DRLIRCYSKLVISIAAPYQGKGLSLQDLTQEGNIGLLKGAERFEPNRGHKLSTYAYWWIRQAIIRALDKNSRLVRLPGYMGQMVARLAEANNHLGIKLSR
DRLIRCYSKLVISIAAPYQGKGLSLQDLTQEGNIGLLKGAERFEPNRGHKLSTYAYWWIRQAIIRALDK SRLVRLPG+MGQMVAR+AE NNHLGIKLSR
Subjt: DRLIRCYSKLVISIAAPYQGKGLSLQDLTQEGNIGLLKGAERFEPNRGHKLSTYAYWWIRQAIIRALDKNSRLVRLPGYMGQMVARLAEANNHLGIKLSR
Query: PPTHKEVAESLKVHVSTVRLVTERSKRPISINQPFNDRGCLTLQEIMPGPDNLTPESMVMRKLMKQELKKLLNTLSKREAHILSLYFGLNGEIPQSFEEI
PPT+KEVAESLKVH+ST+RLV ERSKRPISINQP NDR CLTLQEIMPGPDNLTPE+MVMRKLMKQELK+LLNTLSKREA ILSLYFGLNGEIPQSFEEI
Subjt: PPTHKEVAESLKVHVSTVRLVTERSKRPISINQPFNDRGCLTLQEIMPGPDNLTPESMVMRKLMKQELKKLLNTLSKREAHILSLYFGLNGEIPQSFEEI
Query: GKSLNLSRETIRKINVATLSKLKKTDILDYLKDYLV
GKSLNLSRETIR+ N+ATLSKLKKTD+LDYLKDYLV
Subjt: GKSLNLSRETIRKINVATLSKLKKTDILDYLKDYLV
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| XP_008461821.1 PREDICTED: RNA polymerase sigma factor sigD, chloroplastic [Cucumis melo] | 1.6e-217 | 91.25 | Show/hide |
Query: SPTLPSISLSSLPSLKTHLPQQPHFPFPPFSTKLGSNFISNDTLTLPPPPEAAVLGVEAAREHVLVEARGFSEDWSCKNLERMEESCGGDGTVAWKKKRR
SPTLPSISLSSLPSLKTHLPQQPHFPFPPFS+KLG NFIS DTLTLPPPPEAAVL VEAA EHVLVEARGFSEDWS KN+ERMEESC GDGTVAWKKKRR
Subjt: SPTLPSISLSSLPSLKTHLPQQPHFPFPPFSTKLGSNFISNDTLTLPPPPEAAVLGVEAAREHVLVEARGFSEDWSCKNLERMEESCGGDGTVAWKKKRR
Query: KRRKEVGVKAEENWVALSSGPLRPGYLSSKEEAELCLCLKEAAQLERAKTRIMETQEHEPTNKQLAIALGTKLGSIDRILCRARESRDRLIRCYSKLVIS
KRRKEVGVKAEENW+ALSSGPLRPGYLS KEEAELCLCLKEA LE+ K+RIMETQEHEPTNKQLAIA+GTK G IDRILCRARESRDRLIRCYSKLVIS
Subjt: KRRKEVGVKAEENWVALSSGPLRPGYLSSKEEAELCLCLKEAAQLERAKTRIMETQEHEPTNKQLAIALGTKLGSIDRILCRARESRDRLIRCYSKLVIS
Query: IAAPYQGKGLSLQDLTQEGNIGLLKGAERFEPNRGHKLSTYAYWWIRQAIIRALDKNSRLVRLPGYMGQMVARLAEANNHLGIKLSRPPTHKEVAESLKV
IAAPYQGKGLSLQDLTQEGNIGLLKGAERFEP+RGHKLSTYAYWWIRQAIIRALDK SRLVRLPG+MGQMVAR+AE NNHLGIKLSRPPT++EVAESLKV
Subjt: IAAPYQGKGLSLQDLTQEGNIGLLKGAERFEPNRGHKLSTYAYWWIRQAIIRALDKNSRLVRLPGYMGQMVARLAEANNHLGIKLSRPPTHKEVAESLKV
Query: HVSTVRLVTERSKRPISINQPFNDRGCLTLQEIMPGPDNLTPESMVMRKLMKQELKKLLNTLSKREAHILSLYFGLNGEIPQSFEEIGKSLNLSRETIRK
VSTVRLV ERSKRPISINQP NDR CLTLQEI+PGPDNLTPE+MVMRKLMKQELK+LLNTLSKREAHILSLYFGLNGEIPQSFEEIGKSLNLSRETIR+
Subjt: HVSTVRLVTERSKRPISINQPFNDRGCLTLQEIMPGPDNLTPESMVMRKLMKQELKKLLNTLSKREAHILSLYFGLNGEIPQSFEEIGKSLNLSRETIRK
Query: INVATLSKLKKTDILDYLKDYLV
IN+ATLSKLKKT++LDY+KDYLV
Subjt: INVATLSKLKKTDILDYLKDYLV
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| XP_023528248.1 RNA polymerase sigma factor sigD, chloroplastic [Cucurbita pepo subsp. pepo] | 4.7e-214 | 87.87 | Show/hide |
Query: MATTSSLCSLPTQSPTLPSISLSSLPSLKTHLPQQPHFPFPPFSTKLGSNFISNDTLTLPPPPE-AAVLGVEAAREHVLVEARGFSEDWSCKNLERMEES
MATTSSLCSLP QSPTLPSISLSSLPSLKTHLPQQPHF PFSTKL NFI+NDTLT PPP E AAVL VEAAREHVLVEA S+DW CKNLE+ME+S
Subjt: MATTSSLCSLPTQSPTLPSISLSSLPSLKTHLPQQPHFPFPPFSTKLGSNFISNDTLTLPPPPE-AAVLGVEAAREHVLVEARGFSEDWSCKNLERMEES
Query: CGGDGTVAWKKKRRKRRKEVGVKAEENWVALSSGPLRPGYLSSKEEAELCLCLKEAAQLERAKTRIMETQEHEPTNKQLAIALGTKLGSIDRILCRARES
CGGDG VAWKK+RRKRRKEVG AEENWVALS+GPLRPG+LSSKEEAELCLCLKEAAQ+E+ KTRIMETQ+HEPTNKQLAIA+GTKLG IDR+L RARES
Subjt: CGGDGTVAWKKKRRKRRKEVGVKAEENWVALSSGPLRPGYLSSKEEAELCLCLKEAAQLERAKTRIMETQEHEPTNKQLAIALGTKLGSIDRILCRARES
Query: RDRLIRCYSKLVISIAAPYQGKGLSLQDLTQEGNIGLLKGAERFEPNRGHKLSTYAYWWIRQAIIRALDKNSRLVRLPGYMGQMVARLAEANNHLGIKLS
RDRLIRCYSKLVISIAAPYQGKG+SLQDLTQEGNIGLLKGAERFEPNRGHKLSTYAYWWIRQ II+ALDK SRLVRLPG+MGQMVAR+AEANNHLGIKLS
Subjt: RDRLIRCYSKLVISIAAPYQGKGLSLQDLTQEGNIGLLKGAERFEPNRGHKLSTYAYWWIRQAIIRALDKNSRLVRLPGYMGQMVARLAEANNHLGIKLS
Query: RPPTHKEVAESLKVHVSTVRLVTERSKRPISINQPFNDRGCLTLQEIMPGPDNLTPESMVMRKLMKQELKKLLNTLSKREAHILSLYFGLNGEIPQSFEE
R PTHKEVA+ LKV VSTVRLVTERSKRPISINQP NDRGCLTLQEIMPGPDNLTPE+MV+RKLMKQELKKLLNTLSKREAHIL+LYFGLNG+IPQSFEE
Subjt: RPPTHKEVAESLKVHVSTVRLVTERSKRPISINQPFNDRGCLTLQEIMPGPDNLTPESMVMRKLMKQELKKLLNTLSKREAHILSLYFGLNGEIPQSFEE
Query: IGKSLNLSRETIRKINVATLSKLKKTDILDYLKDYLV
IGKSLNLSRETIR+ N+ATL+KLKK++ILDYLKDYLV
Subjt: IGKSLNLSRETIRKINVATLSKLKKTDILDYLKDYLV
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| XP_038906215.1 RNA polymerase sigma factor sigD, chloroplastic [Benincasa hispida] | 3.5e-233 | 94.72 | Show/hide |
Query: MATTSSLCSLPTQSPTLPSISLSSLPSLKTHLPQQPHFPFPPFSTKLGSNFISNDTLTLPPPPEAAVLGVEAAREHVLVEARGFSEDWSCKNLERMEESC
MATTSSLCSLPTQSPTLPSISLSSLPSLKTHLPQQPHFPFPPFSTKLG+NFI+NDTLTLPPPPEAAVL VEAAREHVLV+ARGFSEDWSCKNLERME SC
Subjt: MATTSSLCSLPTQSPTLPSISLSSLPSLKTHLPQQPHFPFPPFSTKLGSNFISNDTLTLPPPPEAAVLGVEAAREHVLVEARGFSEDWSCKNLERMEESC
Query: GGDGTVAWKKKRRKRRKEVGVKAEENWVALSSGPLRPGYLSSKEEAELCLCLKEAAQLERAKTRIMETQEHEPTNKQLAIALGTKLGSIDRILCRARESR
GGDGTVAWKKKRRKRRKEVG+KAEENW ALSSGPLRPGYLS KEEAELCLCLKEAAQLE AKTRIMETQEHEPTN+QLAIALGTKLGSIDRILCRARESR
Subjt: GGDGTVAWKKKRRKRRKEVGVKAEENWVALSSGPLRPGYLSSKEEAELCLCLKEAAQLERAKTRIMETQEHEPTNKQLAIALGTKLGSIDRILCRARESR
Query: DRLIRCYSKLVISIAAPYQGKGLSLQDLTQEGNIGLLKGAERFEPNRGHKLSTYAYWWIRQAIIRALDKNSRLVRLPGYMGQMVARLAEANNHLGIKLSR
DRLIRCYSKLVISIAAPYQGKGLSLQDLTQEGNIGLLKGAERFEPNRGHKLSTYAYWWIRQAIIRALDK SRLVRLPG+MGQMVAR+AEANNHLG+KLSR
Subjt: DRLIRCYSKLVISIAAPYQGKGLSLQDLTQEGNIGLLKGAERFEPNRGHKLSTYAYWWIRQAIIRALDKNSRLVRLPGYMGQMVARLAEANNHLGIKLSR
Query: PPTHKEVAESLKVHVSTVRLVTERSKRPISINQPFNDRGCLTLQEIMPGPDNLTPESMVMRKLMKQELKKLLNTLSKREAHILSLYFGLNGEIPQSFEEI
PPTHKEVAESLKV VSTVRLVTERSKRPISINQP NDRGCLTLQEIMPGPDNLTPE+MVMRKLMKQE+K+LLNTLSKREAHILSLYFGLNGEIP+SFEEI
Subjt: PPTHKEVAESLKVHVSTVRLVTERSKRPISINQPFNDRGCLTLQEIMPGPDNLTPESMVMRKLMKQELKKLLNTLSKREAHILSLYFGLNGEIPQSFEEI
Query: GKSLNLSRETIRKINVATLSKLKKTDILDYLKDYLV
GKSLNLSRETIR+INVATLSKLK TDILDYLK+YLV
Subjt: GKSLNLSRETIRKINVATLSKLKKTDILDYLKDYLV
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A0A0L9T0 Uncharacterized protein | 1.7e-225 | 91.74 | Show/hide |
Query: MATTSSLCSLPTQSPTLPSISLSSLPSLKTHLPQQPHFPFPPFSTKLGSNFISNDTLTLPPPPEAAVLGVEAAREHVLVEARGFSEDWSCKNLERMEESC
MATTSSLCSLP QSPTLPSISLSSLPSLKTHLPQQPHFPFPPFSTKLG N ISNDTLTLPPPPEAAVL VEAA EHVLVEA+GFSEDWS KN+E+MEESC
Subjt: MATTSSLCSLPTQSPTLPSISLSSLPSLKTHLPQQPHFPFPPFSTKLGSNFISNDTLTLPPPPEAAVLGVEAAREHVLVEARGFSEDWSCKNLERMEESC
Query: GGDGTVAWKKKRRKRRKEVGVKAEENWVALSSGPLRPGYLSSKEEAELCLCLKEAAQLERAKTRIMETQEHEPTNKQLAIALGTKLGSIDRILCRARESR
GDGTVAWKKKRRKRRKEVGVKAEENW+ALSSGPLRPGYLS KEEAELCLCLKEA LE KTRIMETQEHEPTNKQLAIA+GTK G IDRILCRARESR
Subjt: GGDGTVAWKKKRRKRRKEVGVKAEENWVALSSGPLRPGYLSSKEEAELCLCLKEAAQLERAKTRIMETQEHEPTNKQLAIALGTKLGSIDRILCRARESR
Query: DRLIRCYSKLVISIAAPYQGKGLSLQDLTQEGNIGLLKGAERFEPNRGHKLSTYAYWWIRQAIIRALDKNSRLVRLPGYMGQMVARLAEANNHLGIKLSR
DRLIRCYSKLVISIAAPYQGKGLSLQDLTQEGNIGLLKGAERFEPNRGHKLSTYAYWWIRQAIIRALDK SRLVRLPG+MGQMVAR+AE NNHLGIKLSR
Subjt: DRLIRCYSKLVISIAAPYQGKGLSLQDLTQEGNIGLLKGAERFEPNRGHKLSTYAYWWIRQAIIRALDKNSRLVRLPGYMGQMVARLAEANNHLGIKLSR
Query: PPTHKEVAESLKVHVSTVRLVTERSKRPISINQPFNDRGCLTLQEIMPGPDNLTPESMVMRKLMKQELKKLLNTLSKREAHILSLYFGLNGEIPQSFEEI
PPT+KEVAESLKVH+ST+RLV ERSKRPISINQP NDR CLTLQEIMPGPDNLTPE+MVMRKLMKQELK+LLNTLSKREA ILSLYFGLNGEIPQSFEEI
Subjt: PPTHKEVAESLKVHVSTVRLVTERSKRPISINQPFNDRGCLTLQEIMPGPDNLTPESMVMRKLMKQELKKLLNTLSKREAHILSLYFGLNGEIPQSFEEI
Query: GKSLNLSRETIRKINVATLSKLKKTDILDYLKDYLV
GKSLNLSRETIR+ N+ATLSKLKKTD+LDYLKDYLV
Subjt: GKSLNLSRETIRKINVATLSKLKKTDILDYLKDYLV
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| A0A1S3CFL7 RNA polymerase sigma factor sigD, chloroplastic | 7.6e-218 | 91.25 | Show/hide |
Query: SPTLPSISLSSLPSLKTHLPQQPHFPFPPFSTKLGSNFISNDTLTLPPPPEAAVLGVEAAREHVLVEARGFSEDWSCKNLERMEESCGGDGTVAWKKKRR
SPTLPSISLSSLPSLKTHLPQQPHFPFPPFS+KLG NFIS DTLTLPPPPEAAVL VEAA EHVLVEARGFSEDWS KN+ERMEESC GDGTVAWKKKRR
Subjt: SPTLPSISLSSLPSLKTHLPQQPHFPFPPFSTKLGSNFISNDTLTLPPPPEAAVLGVEAAREHVLVEARGFSEDWSCKNLERMEESCGGDGTVAWKKKRR
Query: KRRKEVGVKAEENWVALSSGPLRPGYLSSKEEAELCLCLKEAAQLERAKTRIMETQEHEPTNKQLAIALGTKLGSIDRILCRARESRDRLIRCYSKLVIS
KRRKEVGVKAEENW+ALSSGPLRPGYLS KEEAELCLCLKEA LE+ K+RIMETQEHEPTNKQLAIA+GTK G IDRILCRARESRDRLIRCYSKLVIS
Subjt: KRRKEVGVKAEENWVALSSGPLRPGYLSSKEEAELCLCLKEAAQLERAKTRIMETQEHEPTNKQLAIALGTKLGSIDRILCRARESRDRLIRCYSKLVIS
Query: IAAPYQGKGLSLQDLTQEGNIGLLKGAERFEPNRGHKLSTYAYWWIRQAIIRALDKNSRLVRLPGYMGQMVARLAEANNHLGIKLSRPPTHKEVAESLKV
IAAPYQGKGLSLQDLTQEGNIGLLKGAERFEP+RGHKLSTYAYWWIRQAIIRALDK SRLVRLPG+MGQMVAR+AE NNHLGIKLSRPPT++EVAESLKV
Subjt: IAAPYQGKGLSLQDLTQEGNIGLLKGAERFEPNRGHKLSTYAYWWIRQAIIRALDKNSRLVRLPGYMGQMVARLAEANNHLGIKLSRPPTHKEVAESLKV
Query: HVSTVRLVTERSKRPISINQPFNDRGCLTLQEIMPGPDNLTPESMVMRKLMKQELKKLLNTLSKREAHILSLYFGLNGEIPQSFEEIGKSLNLSRETIRK
VSTVRLV ERSKRPISINQP NDR CLTLQEI+PGPDNLTPE+MVMRKLMKQELK+LLNTLSKREAHILSLYFGLNGEIPQSFEEIGKSLNLSRETIR+
Subjt: HVSTVRLVTERSKRPISINQPFNDRGCLTLQEIMPGPDNLTPESMVMRKLMKQELKKLLNTLSKREAHILSLYFGLNGEIPQSFEEIGKSLNLSRETIRK
Query: INVATLSKLKKTDILDYLKDYLV
IN+ATLSKLKKT++LDY+KDYLV
Subjt: INVATLSKLKKTDILDYLKDYLV
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| A0A5D3BP27 RNA polymerase sigma factor sigD | 5.5e-224 | 91.28 | Show/hide |
Query: MATTSSLCSLPTQSPTLPSISLSSLPSLKTHLPQQPHFPFPPFSTKLGSNFISNDTLTLPPPPEAAVLGVEAAREHVLVEARGFSEDWSCKNLERMEESC
MATTSSLCSLP QSPTLPSISLSSLPSLKTHLPQQPHFPFPPFS+KLG NFIS DTLTLPPPPEAAVL VEAA EHVLVEARGFSEDWS KN+ERMEESC
Subjt: MATTSSLCSLPTQSPTLPSISLSSLPSLKTHLPQQPHFPFPPFSTKLGSNFISNDTLTLPPPPEAAVLGVEAAREHVLVEARGFSEDWSCKNLERMEESC
Query: GGDGTVAWKKKRRKRRKEVGVKAEENWVALSSGPLRPGYLSSKEEAELCLCLKEAAQLERAKTRIMETQEHEPTNKQLAIALGTKLGSIDRILCRARESR
GDGTVAWKKKRRKRRKEVGVKAEENW+ALSSGPLRPGYLS KEEAELCLCLKEA LE+ K+RIMETQEHEPTNKQLAIA+GTK G IDRILCRARESR
Subjt: GGDGTVAWKKKRRKRRKEVGVKAEENWVALSSGPLRPGYLSSKEEAELCLCLKEAAQLERAKTRIMETQEHEPTNKQLAIALGTKLGSIDRILCRARESR
Query: DRLIRCYSKLVISIAAPYQGKGLSLQDLTQEGNIGLLKGAERFEPNRGHKLSTYAYWWIRQAIIRALDKNSRLVRLPGYMGQMVARLAEANNHLGIKLSR
DRLIRCYSKLVISIAAPYQGKGLSLQDLTQEGNIGLLKGAERFEP+RGHKLSTYAYWWIRQAIIRALDK SRLVRLPG+MGQMVAR+AE NNHLGIKLSR
Subjt: DRLIRCYSKLVISIAAPYQGKGLSLQDLTQEGNIGLLKGAERFEPNRGHKLSTYAYWWIRQAIIRALDKNSRLVRLPGYMGQMVARLAEANNHLGIKLSR
Query: PPTHKEVAESLKVHVSTVRLVTERSKRPISINQPFNDRGCLTLQEIMPGPDNLTPESMVMRKLMKQELKKLLNTLSKREAHILSLYFGLNGEIPQSFEEI
PPT++EVAESLKV VSTVRLV ERSKRPISINQP NDR CLTLQEI+PGPDNLTPE+MVMRKLMKQELK+LLNTLSKREAHILSLYFGLNGEIPQSFEEI
Subjt: PPTHKEVAESLKVHVSTVRLVTERSKRPISINQPFNDRGCLTLQEIMPGPDNLTPESMVMRKLMKQELKKLLNTLSKREAHILSLYFGLNGEIPQSFEEI
Query: GKSLNLSRETIRKINVATLSKLKKTDILDYLKDYLV
GKSLNLSRETIR+IN+ATLSKLKKT++LDY+KDYLV
Subjt: GKSLNLSRETIRKINVATLSKLKKTDILDYLKDYLV
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| A0A6J1FAN3 RNA polymerase sigma factor sigD, chloroplastic | 1.1e-213 | 87.64 | Show/hide |
Query: MATTSSLCSLPTQSPTLPSISLSSLPSLKTHLPQQPHFPFPPFSTKLGSNFISNDTLTLPPPPE-AAVLGVEAAREHVLVEARGFSEDWSCKNLERMEES
MATTSSLCSLP QSPTLPSISLSSLPSLKTHLPQQPHF PFSTKL NFI+NDTLT PPP E AAVL VEAAREHVLVEA S+DWSCKNLE+ME+S
Subjt: MATTSSLCSLPTQSPTLPSISLSSLPSLKTHLPQQPHFPFPPFSTKLGSNFISNDTLTLPPPPE-AAVLGVEAAREHVLVEARGFSEDWSCKNLERMEES
Query: CGGDGTVAWKKKRRKRRKEVGVKAEENWVALSSGPLRPGYLSSKEEAELCLCLKEAAQLERAKTRIMETQEHEPTNKQLAIALGTKLGSIDRILCRARES
CGG G VAWKK+RRKRRKEVG AEENWVALS+GPLRPG+LSSKEEAELCLCLKEAAQ+E+ KTRIMETQEHEPTNKQLAIA+GTKLG IDR+L RARES
Subjt: CGGDGTVAWKKKRRKRRKEVGVKAEENWVALSSGPLRPGYLSSKEEAELCLCLKEAAQLERAKTRIMETQEHEPTNKQLAIALGTKLGSIDRILCRARES
Query: RDRLIRCYSKLVISIAAPYQGKGLSLQDLTQEGNIGLLKGAERFEPNRGHKLSTYAYWWIRQAIIRALDKNSRLVRLPGYMGQMVARLAEANNHLGIKLS
RDRLIRCYSKLVISIAAPYQGKG+SLQDLTQEGNIGLLKGAERFEPNRGHKLSTYAYWWIRQ II+ALDK SRLVRLPG+MGQMVA++AEANNHLGIKLS
Subjt: RDRLIRCYSKLVISIAAPYQGKGLSLQDLTQEGNIGLLKGAERFEPNRGHKLSTYAYWWIRQAIIRALDKNSRLVRLPGYMGQMVARLAEANNHLGIKLS
Query: RPPTHKEVAESLKVHVSTVRLVTERSKRPISINQPFNDRGCLTLQEIMPGPDNLTPESMVMRKLMKQELKKLLNTLSKREAHILSLYFGLNGEIPQSFEE
R PTHKEVA+ LKV VSTVRLVTER+KRPISINQP NDRGCLTLQEIMPGPDNLTPE+MV+RKLMKQELKKLLNTLSKREAHIL+LYFGLNG+IPQSFEE
Subjt: RPPTHKEVAESLKVHVSTVRLVTERSKRPISINQPFNDRGCLTLQEIMPGPDNLTPESMVMRKLMKQELKKLLNTLSKREAHILSLYFGLNGEIPQSFEE
Query: IGKSLNLSRETIRKINVATLSKLKKTDILDYLKDYLV
IGKSLNLSRETIR+ N+ATL+KLKK++ILDYLKDYLV
Subjt: IGKSLNLSRETIRKINVATLSKLKKTDILDYLKDYLV
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| A0A6J1J3P0 RNA polymerase sigma factor sigD, chloroplastic | 8.7e-214 | 87.64 | Show/hide |
Query: MATTSSLCSLPTQSPTLPSISLSSLPSLKTHLPQQPHFPFPPFSTKLGSNFISNDTLTLPPPPE-AAVLGVEAAREHVLVEARGFSEDWSCKNLERMEES
MATTSSLCSLP QSPTLPSISLSSLPSLKTHLPQQPHF PFSTKL NFISNDTLT PPP E AAVL VEAAREHVLVEA S+DW CKNLE+ME+S
Subjt: MATTSSLCSLPTQSPTLPSISLSSLPSLKTHLPQQPHFPFPPFSTKLGSNFISNDTLTLPPPPE-AAVLGVEAAREHVLVEARGFSEDWSCKNLERMEES
Query: CGGDGTVAWKKKRRKRRKEVGVKAEENWVALSSGPLRPGYLSSKEEAELCLCLKEAAQLERAKTRIMETQEHEPTNKQLAIALGTKLGSIDRILCRARES
CGGDG VAWKK+RRKRRKEVG AEENWVALSSGPLRPG+LSSKEEAELCLCLKEAAQ+E+ KTRIMETQ+HEPTNKQLAIA+GTKLG IDR+L RARES
Subjt: CGGDGTVAWKKKRRKRRKEVGVKAEENWVALSSGPLRPGYLSSKEEAELCLCLKEAAQLERAKTRIMETQEHEPTNKQLAIALGTKLGSIDRILCRARES
Query: RDRLIRCYSKLVISIAAPYQGKGLSLQDLTQEGNIGLLKGAERFEPNRGHKLSTYAYWWIRQAIIRALDKNSRLVRLPGYMGQMVARLAEANNHLGIKLS
RDRLIRCYSKLVISIAAPYQGKG+SLQDLTQEGNIGLLKGAERFEPNRGHKLSTYAYWWIRQ II+ALDK SRLVRLPG+MGQMVAR+AEANNHLGIKLS
Subjt: RDRLIRCYSKLVISIAAPYQGKGLSLQDLTQEGNIGLLKGAERFEPNRGHKLSTYAYWWIRQAIIRALDKNSRLVRLPGYMGQMVARLAEANNHLGIKLS
Query: RPPTHKEVAESLKVHVSTVRLVTERSKRPISINQPFNDRGCLTLQEIMPGPDNLTPESMVMRKLMKQELKKLLNTLSKREAHILSLYFGLNGEIPQSFEE
R PTHKEVA+ LKV VSTVRLVTERSKRPISIN+P NDRGCLTLQEIMPGPDNLTPE+MV+RKLMKQELK+LL+TLSKREAHIL+LYFGLNG+IPQSFEE
Subjt: RPPTHKEVAESLKVHVSTVRLVTERSKRPISINQPFNDRGCLTLQEIMPGPDNLTPESMVMRKLMKQELKKLLNTLSKREAHILSLYFGLNGEIPQSFEE
Query: IGKSLNLSRETIRKINVATLSKLKKTDILDYLKDYLV
IGKSLNLSRETIR+ N+ATL+KLKK++ILDYLKDYLV
Subjt: IGKSLNLSRETIRKINVATLSKLKKTDILDYLKDYLV
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| SwissProt top hits | e value | %identity | Alignment |
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| O22056 RNA polymerase sigma factor sigB | 2.1e-47 | 32.37 | Show/hide |
Query: KNLERMEESCGGDGTVAWKKKRRKRRKEVGVKAEENWVALSSGPLRPGYLSSKEEAELCLCLKEAAQLERAKTRIMETQEHEPTNKQLAIALGTKLGSID
K LE+ T + KK+R +EV ++ +++ + L+ +EE EL +++ +LER +T + E +PT Q A A G S+
Subjt: KNLERMEESCGGDGTVAWKKKRRKRRKEVGVKAEENWVALSSGPLRPGYLSSKEEAELCLCLKEAAQLERAKTRIMETQEHEPTNKQLAIALGTKLGSID
Query: RILCRARESRDRLIRCYSKLVISIAAPYQGKGLSLQDLTQEGNIGLLKGAERFEPNRGHKLSTYAYWWIRQAIIRALDKNSRLVRLPGYMGQMVARLAEA
+ + +D++I+ +LVISIA YQG G++LQDL QEG GL++GAE+F+ +G K STYA+WWI+QA+ ++L SR++RLP +M + R+ EA
Subjt: RILCRARESRDRLIRCYSKLVISIAAPYQGKGLSLQDLTQEGNIGLLKGAERFEPNRGHKLSTYAYWWIRQAIIRALDKNSRLVRLPGYMGQMVARLAEA
Query: NNHLGIKLSRPPTHKEVAESLKVHVSTVRLVTERSKRPISINQPFNDRGCLTLQEIMPGPDNLTPESMVMRKLMKQELKKLLNTLSKREAHILSLYFGLN
L + + P ++E+AE+ + + + V K P S++Q L E++ P+ +T E +++++ M+Q+L K+L++L RE ++ FG+
Subjt: NNHLGIKLSRPPTHKEVAESLKVHVSTVRLVTERSKRPISINQPFNDRGCLTLQEIMPGPDNLTPESMVMRKLMKQELKKLLNTLSKREAHILSLYFGLN
Query: GEIPQSFEEIGKSLNLSRETIRKINVATLSKLKKTDILDYLKDYLV
++ +EIG+ + +SRE +R+I + KLK ++L+ YLV
Subjt: GEIPQSFEEIGKSLNLSRETIRKINVATLSKLKKTDILDYLKDYLV
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| P26683 RNA polymerase sigma factor SigA | 3.8e-49 | 32.74 | Show/hide |
Query: EESCGGDGTVAWKKKRRKRRKEVGVKAEENWVALSSGPLRPGYLSSKEEAELCLCLKEAAQLERAKTRIMETQEHEPTNKQLAIALGTKLGSIDRILCRA
+E G A ++R + +K+ + G +R L + EE EL + + +LER + R+ E E +P + + A A+ L + L
Subjt: EESCGGDGTVAWKKKRRKRRKEVGVKAEENWVALSSGPLRPGYLSSKEEAELCLCLKEAAQLERAKTRIMETQEHEPTNKQLAIALGTKLGSIDRILCRA
Query: RESRDRLIRCYSKLVISIAAPYQGKGLSLQDLTQEGNIGLLKGAERFEPNRGHKLSTYAYWWIRQAIIRALDKNSRLVRLPGYMGQMVARLAEANNHLGI
R ++D++++ +LV+SIA Y +GLS QDL QEG++GL++ AE+F+ +G+K STYA WWIRQAI RA+ SR +RLP ++ + ++R+ + L
Subjt: RESRDRLIRCYSKLVISIAAPYQGKGLSLQDLTQEGNIGLLKGAERFEPNRGHKLSTYAYWWIRQAIIRALDKNSRLVRLPGYMGQMVARLAEANNHLGI
Query: KLSRPPTHKEVAESLKVHVSTVRLVTERSKRPISINQPFNDRGCLTLQEIMPGPDNLTPESMVMRKLMKQELKKLLNTLSKREAHILSLYFGLNGEIPQS
++ R PT +E+A +++ + +R + + ++ PIS+ P L + + D TPE V + L++++L+K+L++LS RE +L L +GL+ ++
Subjt: KLSRPPTHKEVAESLKVHVSTVRLVTERSKRPISINQPFNDRGCLTLQEIMPGPDNLTPESMVMRKLMKQELKKLLNTLSKREAHILSLYFGLNGEIPQS
Query: FEEIGKSLNLSRETIRKINVATLSKLKKTDILDYLKDYL
EEIG+ N++RE IR+I L KL+ + LK+Y+
Subjt: FEEIGKSLNLSRETIRKINVATLSKLKKTDILDYLKDYL
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| P38023 RNA polymerase sigma factor SigA1 | 7.7e-50 | 33.82 | Show/hide |
Query: EESCGGDGTVAWKKKRRKRRKEVGVKAEENWVALSSGPL-RPGYLSSKEEAELCLCLKEAAQLERAKTRIMETQEHEPTNKQLAIALGTKLGSIDRILCR
E+S G D A K K + R+ E+ + L + R L + EE EL + + LER + ++E + P++ + A A+ + L R L R
Subjt: EESCGGDGTVAWKKKRRKRRKEVGVKAEENWVALSSGPL-RPGYLSSKEEAELCLCLKEAAQLERAKTRIMETQEHEPTNKQLAIALGTKLGSIDRILCR
Query: ARESRDRLIRCYSKLVISIAAPYQGKGLSLQDLTQEGNIGLLKGAERFEPNRGHKLSTYAYWWIRQAIIRALDKNSRLVRLPGYMGQMVARLAEANNHLG
R ++D++++ +LV+SIA Y +GLS QDL QEG++GL++ AE+F+ +G+K STYA WWIRQAI RA+ SR +RLP ++ + ++R+ + L
Subjt: ARESRDRLIRCYSKLVISIAAPYQGKGLSLQDLTQEGNIGLLKGAERFEPNRGHKLSTYAYWWIRQAIIRALDKNSRLVRLPGYMGQMVARLAEANNHLG
Query: IKLSRPPTHKEVAESLKVHVSTVRLVTERSKRPISINQPFNDRGCLTLQEIMPGPDNLTPESMVMRKLMKQELKKLLNTLSKREAHILSLYFGLNGEIPQ
++ R PT +E+A +++ + +R + + ++ PIS+ P L + + D TPE V + L++++L+ +L+TLS RE +L L +GL+ +
Subjt: IKLSRPPTHKEVAESLKVHVSTVRLVTERSKRPISINQPFNDRGCLTLQEIMPGPDNLTPESMVMRKLMKQELKKLLNTLSKREAHILSLYFGLNGEIPQ
Query: SFEEIGKSLNLSRETIRKINVATLSKLKKTDILDYLKDYL
+ EEIG+ N++RE IR+I L KL+ + LK+Y+
Subjt: SFEEIGKSLNLSRETIRKINVATLSKLKKTDILDYLKDYL
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| Q9LD95 RNA polymerase sigma factor sigF, chloroplastic | 3.0e-46 | 34.16 | Show/hide |
Query: DGTVAWKKKRRKRRKEVGVKAEENWVALSSGPLRPGYLSSKEEAELCLCLKEAAQLERAKTRIMETQEHEPTNKQLAIALGTKLGSIDRILCRARESRDR
+G V K +K+ K+ G ++ GP L++KEEAEL ++ +LE+ KT++ EPT + A A+G + + R R SR++
Subjt: DGTVAWKKKRRKRRKEVGVKAEENWVALSSGPLRPGYLSSKEEAELCLCLKEAAQLERAKTRIMETQEHEPTNKQLAIALGTKLGSIDRILCRARESRDR
Query: LIRCYSKLVISIAAPYQGKGLSLQDLTQEGNIGLLKGAERFEPNRGHKLSTYAYWWIRQAIIRALDKNSRLVRLPGYMGQMVARLAEANNHLGIKLSRPP
LI +LV+ IA YQ +GL+ QDL QEG++GL+K E+F+P G + +TYAYWWIRQ+I +++ +NSR +RLP + ++ +++EA + + P
Subjt: LIRCYSKLVISIAAPYQGKGLSLQDLTQEGNIGLLKGAERFEPNRGHKLSTYAYWWIRQAIIRALDKNSRLVRLPGYMGQMVARLAEANNHLGIKLSRPP
Query: THKEVAESLKVHVSTVRLVTERSKRPISINQPFNDRGCLTLQEIMPGPDNLTPESMVMRKLMKQELKKLLNTLSKREAHILSLYFGLNGEIPQSFEEIGK
+ +E+A + V + + ++ P+S+ QP T QEI P TP V ++LM+ ++ LLN LS +E I+ L FG++G +S EIG+
Subjt: THKEVAESLKVHVSTVRLVTERSKRPISINQPFNDRGCLTLQEIMPGPDNLTPESMVMRKLMKQELKKLLNTLSKREAHILSLYFGLNGEIPQSFEEIGK
Query: SLNLSRETIRKINVATLSKLKK
LS+E +R++ L +LK+
Subjt: SLNLSRETIRKINVATLSKLKK
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| Q9ZSL6 RNA polymerase sigma factor sigD, chloroplastic | 1.3e-86 | 44.37 | Show/hide |
Query: MATTSSLCSLPTQSPTLPSISLSSLPSLKTHLPQQPHFPFPPFSTKLGSNFISNDTLTLPPPPEAAVLGVEAAREHVLVEARGFSEDWSCKNLERMEESC
MATT + T P+ P ++S L TH Q PFS KL + + DT T+ +++V+ + E G + K R
Subjt: MATTSSLCSLPTQSPTLPSISLSSLPSLKTHLPQQPHFPFPPFSTKLGSNFISNDTLTLPPPPEAAVLGVEAAREHVLVEARGFSEDWSCKNLERMEESC
Query: GGDGTVAWKKKRRKRRKEVGVKAEENWVALS-SGPLRPGYLSSKEEAELCLCLKEAAQLERAKTRIMETQEHEPTNKQLAIALGTKLGSIDRILCRARES
V +++ + + GV+AE +++ G R G+LS EE +LCL LKE A+LE T + +E+E + LA G K S + ILCR +E+
Subjt: GGDGTVAWKKKRRKRRKEVGVKAEENWVALS-SGPLRPGYLSSKEEAELCLCLKEAAQLERAKTRIMETQEHEPTNKQLAIALGTKLGSIDRILCRARES
Query: RDRLIRCYSKLVISIAAPYQGKGLSLQDLTQEGNIGLLKGAERFEPNRGHKLSTYAYWWIRQAIIRALDKNSRLVRLPGYMGQMVARLAEANNHLGIKLS
R+++ RCY +LV+SIA YQGKGL+LQDL QEG+IGLL+GAERF+P+RG+KLSTY YWWI+QAI+RA+ SRLV+LPG M ++ A++AEA+N L KL
Subjt: RDRLIRCYSKLVISIAAPYQGKGLSLQDLTQEGNIGLLKGAERFEPNRGHKLSTYAYWWIRQAIIRALDKNSRLVRLPGYMGQMVARLAEANNHLGIKLS
Query: RPPTHKEVAESLKVHVSTVRLVTERSKRPISINQPFNDRGCLTLQEIMPGPDNLTPESMVMRKLMKQELKKLLNTLSKREAHILSLYFGLNGEIPQSFEE
R P+ +E+AE L ++VS VRL ERS+ P+S+++ + G +TLQEI+ GPD PE MV R+ MK E+++LL +L+ RE+ +L LYFGLNGE P SFEE
Subjt: RPPTHKEVAESLKVHVSTVRLVTERSKRPISINQPFNDRGCLTLQEIMPGPDNLTPESMVMRKLMKQELKKLLNTLSKREAHILSLYFGLNGEIPQSFEE
Query: IGKSLNLSRETIRKINVATLSKLKKTDILDYLKDY
IGKSL LSRE +R+IN L KL+ ++ LK Y
Subjt: IGKSLNLSRETIRKINVATLSKLKKTDILDYLKDY
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| Arabidopsis top hits | e value | %identity | Alignment |
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| AT1G08540.1 RNApolymerase sigma subunit 2 | 1.5e-48 | 32.37 | Show/hide |
Query: KNLERMEESCGGDGTVAWKKKRRKRRKEVGVKAEENWVALSSGPLRPGYLSSKEEAELCLCLKEAAQLERAKTRIMETQEHEPTNKQLAIALGTKLGSID
K LE+ T + KK+R +EV ++ +++ + L+ +EE EL +++ +LER +T + E +PT Q A A G S+
Subjt: KNLERMEESCGGDGTVAWKKKRRKRRKEVGVKAEENWVALSSGPLRPGYLSSKEEAELCLCLKEAAQLERAKTRIMETQEHEPTNKQLAIALGTKLGSID
Query: RILCRARESRDRLIRCYSKLVISIAAPYQGKGLSLQDLTQEGNIGLLKGAERFEPNRGHKLSTYAYWWIRQAIIRALDKNSRLVRLPGYMGQMVARLAEA
+ + +D++I+ +LVISIA YQG G++LQDL QEG GL++GAE+F+ +G K STYA+WWI+QA+ ++L SR++RLP +M + R+ EA
Subjt: RILCRARESRDRLIRCYSKLVISIAAPYQGKGLSLQDLTQEGNIGLLKGAERFEPNRGHKLSTYAYWWIRQAIIRALDKNSRLVRLPGYMGQMVARLAEA
Query: NNHLGIKLSRPPTHKEVAESLKVHVSTVRLVTERSKRPISINQPFNDRGCLTLQEIMPGPDNLTPESMVMRKLMKQELKKLLNTLSKREAHILSLYFGLN
L + + P ++E+AE+ + + + V K P S++Q L E++ P+ +T E +++++ M+Q+L K+L++L RE ++ FG+
Subjt: NNHLGIKLSRPPTHKEVAESLKVHVSTVRLVTERSKRPISINQPFNDRGCLTLQEIMPGPDNLTPESMVMRKLMKQELKKLLNTLSKREAHILSLYFGLN
Query: GEIPQSFEEIGKSLNLSRETIRKINVATLSKLKKTDILDYLKDYLV
++ +EIG+ + +SRE +R+I + KLK ++L+ YLV
Subjt: GEIPQSFEEIGKSLNLSRETIRKINVATLSKLKKTDILDYLKDYLV
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| AT1G64860.1 sigma factor A | 6.5e-36 | 30 | Show/hide |
Query: VLVEARGFSEDWSCKNLERMEESCGGDGTVAWKK-------KRRKRRKEVGVKAEENWV------ALSSGPLRPGY---------LSSKEEAELCLCLKE
+L++ + W+ + + G GT+ KK R++ +G K + N +SSG GY LS E L +K
Subjt: VLVEARGFSEDWSCKNLERMEESCGGDGTVAWKK-------KRRKRRKEVGVKAEENWV------ALSSGPLRPGY---------LSSKEEAELCLCLKE
Query: AAQLERAKTRIMETQEHEPTNKQLAIALGTKLGSIDRILCRARESRDRLIRCYSKLVISIAAPYQGKGLSLQDLTQEGNIGLLKGAERFEPNRGHKLSTY
+L+ K+R+ + EP+++QLA++L + L +R++L +LV+SIA Y G + DL Q G IGLL+G E+F+ ++G ++STY
Subjt: AAQLERAKTRIMETQEHEPTNKQLAIALGTKLGSIDRILCRARESRDRLIRCYSKLVISIAAPYQGKGLSLQDLTQEGNIGLLKGAERFEPNRGHKLSTY
Query: AYWWIRQAIIRALDKNSRLVRLPGYMGQMVARLAEANNHLGIKLSRPPTHKEVAESLKVHVSTVRLVTERSKRPISINQPFNDRGCLTLQEIMPGPDNLT
YWWIRQ + RAL NSR +RLP ++ + + + A L K P+ +AESL + VR TE + S+ DR +PG + +
Subjt: AYWWIRQAIIRALDKNSRLVRLPGYMGQMVARLAEANNHLGIKLSRPPTHKEVAESLKVHVSTVRLVTERSKRPISINQPFNDRGCLTLQEIMPGPDNLT
Query: ----------PESMVMRKLMKQELKKLLN-TLSKREAHILSLYFGLNGEIPQSFEEIGKSLNLSRETIRKINVATLSKLK
P +K+E+ KL++ TL +RE I+ LY+GL+ E ++E+I K + LSRE +R++ + L KLK
Subjt: ----------PESMVMRKLMKQELKKLLN-TLSKREAHILSLYFGLNGEIPQSFEEIGKSLNLSRETIRKINVATLSKLK
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| AT2G36990.1 RNApolymerase sigma-subunit F | 2.2e-47 | 34.16 | Show/hide |
Query: DGTVAWKKKRRKRRKEVGVKAEENWVALSSGPLRPGYLSSKEEAELCLCLKEAAQLERAKTRIMETQEHEPTNKQLAIALGTKLGSIDRILCRARESRDR
+G V K +K+ K+ G ++ GP L++KEEAEL ++ +LE+ KT++ EPT + A A+G + + R R SR++
Subjt: DGTVAWKKKRRKRRKEVGVKAEENWVALSSGPLRPGYLSSKEEAELCLCLKEAAQLERAKTRIMETQEHEPTNKQLAIALGTKLGSIDRILCRARESRDR
Query: LIRCYSKLVISIAAPYQGKGLSLQDLTQEGNIGLLKGAERFEPNRGHKLSTYAYWWIRQAIIRALDKNSRLVRLPGYMGQMVARLAEANNHLGIKLSRPP
LI +LV+ IA YQ +GL+ QDL QEG++GL+K E+F+P G + +TYAYWWIRQ+I +++ +NSR +RLP + ++ +++EA + + P
Subjt: LIRCYSKLVISIAAPYQGKGLSLQDLTQEGNIGLLKGAERFEPNRGHKLSTYAYWWIRQAIIRALDKNSRLVRLPGYMGQMVARLAEANNHLGIKLSRPP
Query: THKEVAESLKVHVSTVRLVTERSKRPISINQPFNDRGCLTLQEIMPGPDNLTPESMVMRKLMKQELKKLLNTLSKREAHILSLYFGLNGEIPQSFEEIGK
+ +E+A + V + + ++ P+S+ QP T QEI P TP V ++LM+ ++ LLN LS +E I+ L FG++G +S EIG+
Subjt: THKEVAESLKVHVSTVRLVTERSKRPISINQPFNDRGCLTLQEIMPGPDNLTPESMVMRKLMKQELKKLLNTLSKREAHILSLYFGLNGEIPQSFEEIGK
Query: SLNLSRETIRKINVATLSKLKK
LS+E +R++ L +LK+
Subjt: SLNLSRETIRKINVATLSKLKK
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| AT3G53920.1 RNApolymerase sigma-subunit C | 2.0e-32 | 31.21 | Show/hide |
Query: SKEEAELCLCLKEAAQLERAKTRIMETQEHEPTNKQLAIALGTKLGSIDRILCRARESRDRLIRCYSKLVISIAAPYQGKGLSLQDLTQEGNIGLLKGAE
S+ E E+ +K A +ER +T++ E + A A G + R L RD L++ LV+ +A Y+G G++ +DL Q G +G+L+GAE
Subjt: SKEEAELCLCLKEAAQLERAKTRIMETQEHEPTNKQLAIALGTKLGSIDRILCRARESRDRLIRCYSKLVISIAAPYQGKGLSLQDLTQEGNIGLLKGAE
Query: RFEPNRGHKLSTYAYWWIRQAIIRALDKNSRLVRLPGYMGQMVARLAEANNHL----GIKLSRPPTHKEVAESLKVHVSTVRLVTERSKRPISINQPFND
RF+ RG+K STY +WIR+++ + +++R V +P + + + + +A L GIK + +E+A+ V +R + K SI++ D
Subjt: RFEPNRGHKLSTYAYWWIRQAIIRALDKNSRLVRLPGYMGQMVARLAEANNHL----GIKLSRPPTHKEVAESLKVHVSTVRLVTERSKRPISINQPFND
Query: RGCLTLQEIMPGPDNLTPESMVMRKLMKQELKKLLNTLSKREAHILSLYFGLNGEIPQSFEEIGKSLNLSRETIRKINVATLSKLKKTDILDYLKDYL
E P +PE VMR+ ++++ LL L RE ++ L +GL P+S EEIGK L +S+E IRKI ++KL+ + L+ YL
Subjt: RGCLTLQEIMPGPDNLTPESMVMRKLMKQELKKLLNTLSKREAHILSLYFGLNGEIPQSFEEIGKSLNLSRETIRKINVATLSKLKKTDILDYLKDYL
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| AT5G13730.1 sigma factor 4 | 9.6e-88 | 44.37 | Show/hide |
Query: MATTSSLCSLPTQSPTLPSISLSSLPSLKTHLPQQPHFPFPPFSTKLGSNFISNDTLTLPPPPEAAVLGVEAAREHVLVEARGFSEDWSCKNLERMEESC
MATT + T P+ P ++S L TH Q PFS KL + + DT T+ +++V+ + E G + K R
Subjt: MATTSSLCSLPTQSPTLPSISLSSLPSLKTHLPQQPHFPFPPFSTKLGSNFISNDTLTLPPPPEAAVLGVEAAREHVLVEARGFSEDWSCKNLERMEESC
Query: GGDGTVAWKKKRRKRRKEVGVKAEENWVALS-SGPLRPGYLSSKEEAELCLCLKEAAQLERAKTRIMETQEHEPTNKQLAIALGTKLGSIDRILCRARES
V +++ + + GV+AE +++ G R G+LS EE +LCL LKE A+LE T + +E+E + LA G K S + ILCR +E+
Subjt: GGDGTVAWKKKRRKRRKEVGVKAEENWVALS-SGPLRPGYLSSKEEAELCLCLKEAAQLERAKTRIMETQEHEPTNKQLAIALGTKLGSIDRILCRARES
Query: RDRLIRCYSKLVISIAAPYQGKGLSLQDLTQEGNIGLLKGAERFEPNRGHKLSTYAYWWIRQAIIRALDKNSRLVRLPGYMGQMVARLAEANNHLGIKLS
R+++ RCY +LV+SIA YQGKGL+LQDL QEG+IGLL+GAERF+P+RG+KLSTY YWWI+QAI+RA+ SRLV+LPG M ++ A++AEA+N L KL
Subjt: RDRLIRCYSKLVISIAAPYQGKGLSLQDLTQEGNIGLLKGAERFEPNRGHKLSTYAYWWIRQAIIRALDKNSRLVRLPGYMGQMVARLAEANNHLGIKLS
Query: RPPTHKEVAESLKVHVSTVRLVTERSKRPISINQPFNDRGCLTLQEIMPGPDNLTPESMVMRKLMKQELKKLLNTLSKREAHILSLYFGLNGEIPQSFEE
R P+ +E+AE L ++VS VRL ERS+ P+S+++ + G +TLQEI+ GPD PE MV R+ MK E+++LL +L+ RE+ +L LYFGLNGE P SFEE
Subjt: RPPTHKEVAESLKVHVSTVRLVTERSKRPISINQPFNDRGCLTLQEIMPGPDNLTPESMVMRKLMKQELKKLLNTLSKREAHILSLYFGLNGEIPQSFEE
Query: IGKSLNLSRETIRKINVATLSKLKKTDILDYLKDY
IGKSL LSRE +R+IN L KL+ ++ LK Y
Subjt: IGKSLNLSRETIRKINVATLSKLKKTDILDYLKDY
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