; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CcUC10G197600 (gene) of Watermelon (PI 537277) v1 genome

Gene IDCcUC10G197600
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionRas-related protein
Genome locationCicolChr10:24247759..24251433
RNA-Seq ExpressionCcUC10G197600
SyntenyCcUC10G197600
Gene Ontology termsGO:0005768 - endosome (cellular component)
GO:0005794 - Golgi apparatus (cellular component)
GO:0003924 - GTPase activity (molecular function)
GO:0005525 - GTP binding (molecular function)
InterPro domainsIPR001806 - Small GTPase
IPR005225 - Small GTP-binding protein domain
IPR027417 - P-loop containing nucleoside triphosphate hydrolase


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008461787.1 PREDICTED: ras-related protein RABA4c isoform X1 [Cucumis melo]2.7e-11295.5Show/hide
Query:  MSNLQSTFNQKIDYVFKVVLIGDSAVGKSQLLSRFARNEFSLDSKATIGVEFQTKTLVIDQKAIKAQIWDTAGQERYRAVTSAYYRGAVGAMLIYDMTKR
        MSNLQS FNQKIDYVFKVVLIGDSAVGKSQLLSRFARNEFSLDSKATIGVEFQTKTL IDQKAIKAQIWDTAGQERYRAVTSAYYRGAVGAML+YDMTKR
Subjt:  MSNLQSTFNQKIDYVFKVVLIGDSAVGKSQLLSRFARNEFSLDSKATIGVEFQTKTLVIDQKAIKAQIWDTAGQERYRAVTSAYYRGAVGAMLIYDMTKR

Query:  QSFDHIARWLEELRGHADKNIVIMLIGNKSDLGSLRVVPTEDAKEFAQMENLFFMETSALEATNVETAFNTILTEIYRVISRKALIANEDTNSGGSSSLL
        QSFDHIARWLEELRGHADKNIVIMLIGNKSDLGSLRVVPTEDAKEFAQMENLFFMETSALEATNVE AFNTILTEIYRVIS+KAL+AN++T+SGGSSSLL
Subjt:  QSFDHIARWLEELRGHADKNIVIMLIGNKSDLGSLRVVPTEDAKEFAQMENLFFMETSALEATNVETAFNTILTEIYRVISRKALIANEDTNSGGSSSLL

Query:  KGTKIVVPGQEPQPASSGCCRS
        KGTKIVVPGQEPQ ASSGCCRS
Subjt:  KGTKIVVPGQEPQPASSGCCRS

XP_022949337.1 ras-related protein RABA4c-like [Cucurbita moschata]1.0e-11195.05Show/hide
Query:  MSNLQSTFNQKIDYVFKVVLIGDSAVGKSQLLSRFARNEFSLDSKATIGVEFQTKTLVIDQKAIKAQIWDTAGQERYRAVTSAYYRGAVGAMLIYDMTKR
        MSNLQS FNQKIDYVFKVVLIGDSAVGKSQLLSRF RNEFSLDSKATIGVEFQTKTLVIDQKAIKAQIWDTAGQERYRAVTSAYYRGAVGAML+YDMTKR
Subjt:  MSNLQSTFNQKIDYVFKVVLIGDSAVGKSQLLSRFARNEFSLDSKATIGVEFQTKTLVIDQKAIKAQIWDTAGQERYRAVTSAYYRGAVGAMLIYDMTKR

Query:  QSFDHIARWLEELRGHADKNIVIMLIGNKSDLGSLRVVPTEDAKEFAQMENLFFMETSALEATNVETAFNTILTEIYRVISRKALIANEDTNSGGSSSLL
        Q+FDHIARWLEELR HADKNIVIMLIGNKSDLGSLRVVPTEDAKEFAQMENLFFMETSALEATNVE AFNTILTEIYRVISRKALIANE+T+SGG+SSLL
Subjt:  QSFDHIARWLEELRGHADKNIVIMLIGNKSDLGSLRVVPTEDAKEFAQMENLFFMETSALEATNVETAFNTILTEIYRVISRKALIANEDTNSGGSSSLL

Query:  KGTKIVVPGQEPQPASSGCCRS
        KGTKIVVPGQEPQ A+SGCCRS
Subjt:  KGTKIVVPGQEPQPASSGCCRS

XP_022998498.1 ras-related protein RABA4c-like [Cucurbita maxima]1.6e-11295.5Show/hide
Query:  MSNLQSTFNQKIDYVFKVVLIGDSAVGKSQLLSRFARNEFSLDSKATIGVEFQTKTLVIDQKAIKAQIWDTAGQERYRAVTSAYYRGAVGAMLIYDMTKR
        MSNLQS FNQKIDYVFKVVLIGDSAVGKSQLLSRF RNEFSLDSKATIGVEFQTKTLVIDQKAIKAQIWDTAGQERYRAVTSAYYRGAVGAML+YDMTKR
Subjt:  MSNLQSTFNQKIDYVFKVVLIGDSAVGKSQLLSRFARNEFSLDSKATIGVEFQTKTLVIDQKAIKAQIWDTAGQERYRAVTSAYYRGAVGAMLIYDMTKR

Query:  QSFDHIARWLEELRGHADKNIVIMLIGNKSDLGSLRVVPTEDAKEFAQMENLFFMETSALEATNVETAFNTILTEIYRVISRKALIANEDTNSGGSSSLL
        Q+FDHI RWLEELR HADKNIVIMLIGNKSDLGSLRVVPTEDAKEFAQMENLFFMETSALEATNVE AFNTILTEIYRVISRKALIANE+T+SGGSSSLL
Subjt:  QSFDHIARWLEELRGHADKNIVIMLIGNKSDLGSLRVVPTEDAKEFAQMENLFFMETSALEATNVETAFNTILTEIYRVISRKALIANEDTNSGGSSSLL

Query:  KGTKIVVPGQEPQPASSGCCRS
        KGTKIVVPGQEPQPA+SGCCRS
Subjt:  KGTKIVVPGQEPQPASSGCCRS

XP_023525670.1 ras-related protein RABA4c-like [Cucurbita pepo subsp. pepo]1.0e-11195.05Show/hide
Query:  MSNLQSTFNQKIDYVFKVVLIGDSAVGKSQLLSRFARNEFSLDSKATIGVEFQTKTLVIDQKAIKAQIWDTAGQERYRAVTSAYYRGAVGAMLIYDMTKR
        MSNLQS FNQKIDYVFKVVLIGDSAVGKSQLLSRF RNEFSLDSKATIGVEFQTKTLVIDQKAIKAQIWDTAGQERYRAVTSAYYRGAVGAML+YDMTKR
Subjt:  MSNLQSTFNQKIDYVFKVVLIGDSAVGKSQLLSRFARNEFSLDSKATIGVEFQTKTLVIDQKAIKAQIWDTAGQERYRAVTSAYYRGAVGAMLIYDMTKR

Query:  QSFDHIARWLEELRGHADKNIVIMLIGNKSDLGSLRVVPTEDAKEFAQMENLFFMETSALEATNVETAFNTILTEIYRVISRKALIANEDTNSGGSSSLL
        Q+FDHIARWLEELR HADKNIVIMLIGNKSDLGSLRVVPTEDAKEF+QMENLFFMETSALEATNVE AFNTILTEIYRVISRKALIANE+T+SGGSSSLL
Subjt:  QSFDHIARWLEELRGHADKNIVIMLIGNKSDLGSLRVVPTEDAKEFAQMENLFFMETSALEATNVETAFNTILTEIYRVISRKALIANEDTNSGGSSSLL

Query:  KGTKIVVPGQEPQPASSGCCRS
        KGTKIVVPGQEPQ A+SGCCRS
Subjt:  KGTKIVVPGQEPQPASSGCCRS

XP_038905902.1 ras-related protein RABA4c [Benincasa hispida]7.7e-11296.4Show/hide
Query:  MSNLQSTFNQKIDYVFKVVLIGDSAVGKSQLLSRFARNEFSLDSKATIGVEFQTKTLVIDQKAIKAQIWDTAGQERYRAVTSAYYRGAVGAMLIYDMTKR
        MSNLQS FNQKIDYVFKVVLIGDSAVGKSQLLSRFARNEFSLDSKATIGVEFQTKTLVIDQKAIKAQIWDTAGQERYRAVTSAYYRGAVGAML+YDMTKR
Subjt:  MSNLQSTFNQKIDYVFKVVLIGDSAVGKSQLLSRFARNEFSLDSKATIGVEFQTKTLVIDQKAIKAQIWDTAGQERYRAVTSAYYRGAVGAMLIYDMTKR

Query:  QSFDHIARWLEELRGHADKNIVIMLIGNKSDLGSLRVVPTEDAKEFAQMENLFFMETSALEATNVETAFNTILTEIYRVISRKALIANEDTNSGGSSSLL
        QSFDHIARWLEELRGHADKNIVIMLIGNKSDLGSLRVVPTEDAKEFAQMENLFFMETSALEATNVETAFNTILTEIYRVISRKALIANE+ +SGGSSSLL
Subjt:  QSFDHIARWLEELRGHADKNIVIMLIGNKSDLGSLRVVPTEDAKEFAQMENLFFMETSALEATNVETAFNTILTEIYRVISRKALIANEDTNSGGSSSLL

Query:  KGTKIVVPGQEPQPASSGCCRS
        KGTK+VV GQEPQP SSGCCRS
Subjt:  KGTKIVVPGQEPQPASSGCCRS

TrEMBL top hitse value%identityAlignment
A0A0A0LEW7 Uncharacterized protein1.9e-11195.05Show/hide
Query:  MSNLQSTFNQKIDYVFKVVLIGDSAVGKSQLLSRFARNEFSLDSKATIGVEFQTKTLVIDQKAIKAQIWDTAGQERYRAVTSAYYRGAVGAMLIYDMTKR
        MSNLQS FNQKIDYVFKVVLIGDSAVGKSQLLSRFARNEFSLDSKATIGVEFQTKTL IDQKAIKAQIWDTAGQERYRAVTSAYYRGAVGAML+YDMTKR
Subjt:  MSNLQSTFNQKIDYVFKVVLIGDSAVGKSQLLSRFARNEFSLDSKATIGVEFQTKTLVIDQKAIKAQIWDTAGQERYRAVTSAYYRGAVGAMLIYDMTKR

Query:  QSFDHIARWLEELRGHADKNIVIMLIGNKSDLGSLRVVPTEDAKEFAQMENLFFMETSALEATNVETAFNTILTEIYRVISRKALIANEDTNSGGSSSLL
        Q+FDHIARWLEELRGHADKNIVIMLIGNKSDLGSLRVVPTEDAKEFAQMENL FMETSALEATNVE AFNTILTEIYRVIS+KALIAN++T+SGGSSSLL
Subjt:  QSFDHIARWLEELRGHADKNIVIMLIGNKSDLGSLRVVPTEDAKEFAQMENLFFMETSALEATNVETAFNTILTEIYRVISRKALIANEDTNSGGSSSLL

Query:  KGTKIVVPGQEPQPASSGCCRS
        KGTKIVVPGQEPQ ASSGCCRS
Subjt:  KGTKIVVPGQEPQPASSGCCRS

A0A1S3CFD0 ras-related protein RABA4c isoform X11.3e-11295.5Show/hide
Query:  MSNLQSTFNQKIDYVFKVVLIGDSAVGKSQLLSRFARNEFSLDSKATIGVEFQTKTLVIDQKAIKAQIWDTAGQERYRAVTSAYYRGAVGAMLIYDMTKR
        MSNLQS FNQKIDYVFKVVLIGDSAVGKSQLLSRFARNEFSLDSKATIGVEFQTKTL IDQKAIKAQIWDTAGQERYRAVTSAYYRGAVGAML+YDMTKR
Subjt:  MSNLQSTFNQKIDYVFKVVLIGDSAVGKSQLLSRFARNEFSLDSKATIGVEFQTKTLVIDQKAIKAQIWDTAGQERYRAVTSAYYRGAVGAMLIYDMTKR

Query:  QSFDHIARWLEELRGHADKNIVIMLIGNKSDLGSLRVVPTEDAKEFAQMENLFFMETSALEATNVETAFNTILTEIYRVISRKALIANEDTNSGGSSSLL
        QSFDHIARWLEELRGHADKNIVIMLIGNKSDLGSLRVVPTEDAKEFAQMENLFFMETSALEATNVE AFNTILTEIYRVIS+KAL+AN++T+SGGSSSLL
Subjt:  QSFDHIARWLEELRGHADKNIVIMLIGNKSDLGSLRVVPTEDAKEFAQMENLFFMETSALEATNVETAFNTILTEIYRVISRKALIANEDTNSGGSSSLL

Query:  KGTKIVVPGQEPQPASSGCCRS
        KGTKIVVPGQEPQ ASSGCCRS
Subjt:  KGTKIVVPGQEPQPASSGCCRS

A0A6J1DGV8 ras-related protein RABA4d-like7.8e-11093.24Show/hide
Query:  MSNLQSTFNQKIDYVFKVVLIGDSAVGKSQLLSRFARNEFSLDSKATIGVEFQTKTLVIDQKAIKAQIWDTAGQERYRAVTSAYYRGAVGAMLIYDMTKR
        MSNL S FNQKIDYVFKVVLIGDSAVGKSQLL+RF+RNEFSLDSKATIGVEFQTKTLVIDQK IKAQIWDTAGQERYRAVTSAYYRGAVGAMLIYDMTKR
Subjt:  MSNLQSTFNQKIDYVFKVVLIGDSAVGKSQLLSRFARNEFSLDSKATIGVEFQTKTLVIDQKAIKAQIWDTAGQERYRAVTSAYYRGAVGAMLIYDMTKR

Query:  QSFDHIARWLEELRGHADKNIVIMLIGNKSDLGSLRVVPTEDAKEFAQMENLFFMETSALEATNVETAFNTILTEIYRVISRKALIANEDTNSGGSSSLL
        QSFDHIARWLEELRGHADKNIVIMLIGNKSDLGSLRVVPT+DA+EFAQMENLFFMETSALEATNVETAFNTILTEIY+VISRKAL+ANED +SGG+SSLL
Subjt:  QSFDHIARWLEELRGHADKNIVIMLIGNKSDLGSLRVVPTEDAKEFAQMENLFFMETSALEATNVETAFNTILTEIYRVISRKALIANEDTNSGGSSSLL

Query:  KGTKIVVPGQEPQPASSGCCRS
        KGTKIVVPGQE   ASSGCCRS
Subjt:  KGTKIVVPGQEPQPASSGCCRS

A0A6J1GBR1 ras-related protein RABA4c-like4.9e-11295.05Show/hide
Query:  MSNLQSTFNQKIDYVFKVVLIGDSAVGKSQLLSRFARNEFSLDSKATIGVEFQTKTLVIDQKAIKAQIWDTAGQERYRAVTSAYYRGAVGAMLIYDMTKR
        MSNLQS FNQKIDYVFKVVLIGDSAVGKSQLLSRF RNEFSLDSKATIGVEFQTKTLVIDQKAIKAQIWDTAGQERYRAVTSAYYRGAVGAML+YDMTKR
Subjt:  MSNLQSTFNQKIDYVFKVVLIGDSAVGKSQLLSRFARNEFSLDSKATIGVEFQTKTLVIDQKAIKAQIWDTAGQERYRAVTSAYYRGAVGAMLIYDMTKR

Query:  QSFDHIARWLEELRGHADKNIVIMLIGNKSDLGSLRVVPTEDAKEFAQMENLFFMETSALEATNVETAFNTILTEIYRVISRKALIANEDTNSGGSSSLL
        Q+FDHIARWLEELR HADKNIVIMLIGNKSDLGSLRVVPTEDAKEFAQMENLFFMETSALEATNVE AFNTILTEIYRVISRKALIANE+T+SGG+SSLL
Subjt:  QSFDHIARWLEELRGHADKNIVIMLIGNKSDLGSLRVVPTEDAKEFAQMENLFFMETSALEATNVETAFNTILTEIYRVISRKALIANEDTNSGGSSSLL

Query:  KGTKIVVPGQEPQPASSGCCRS
        KGTKIVVPGQEPQ A+SGCCRS
Subjt:  KGTKIVVPGQEPQPASSGCCRS

A0A6J1KGX4 ras-related protein RABA4c-like7.6e-11395.5Show/hide
Query:  MSNLQSTFNQKIDYVFKVVLIGDSAVGKSQLLSRFARNEFSLDSKATIGVEFQTKTLVIDQKAIKAQIWDTAGQERYRAVTSAYYRGAVGAMLIYDMTKR
        MSNLQS FNQKIDYVFKVVLIGDSAVGKSQLLSRF RNEFSLDSKATIGVEFQTKTLVIDQKAIKAQIWDTAGQERYRAVTSAYYRGAVGAML+YDMTKR
Subjt:  MSNLQSTFNQKIDYVFKVVLIGDSAVGKSQLLSRFARNEFSLDSKATIGVEFQTKTLVIDQKAIKAQIWDTAGQERYRAVTSAYYRGAVGAMLIYDMTKR

Query:  QSFDHIARWLEELRGHADKNIVIMLIGNKSDLGSLRVVPTEDAKEFAQMENLFFMETSALEATNVETAFNTILTEIYRVISRKALIANEDTNSGGSSSLL
        Q+FDHI RWLEELR HADKNIVIMLIGNKSDLGSLRVVPTEDAKEFAQMENLFFMETSALEATNVE AFNTILTEIYRVISRKALIANE+T+SGGSSSLL
Subjt:  QSFDHIARWLEELRGHADKNIVIMLIGNKSDLGSLRVVPTEDAKEFAQMENLFFMETSALEATNVETAFNTILTEIYRVISRKALIANEDTNSGGSSSLL

Query:  KGTKIVVPGQEPQPASSGCCRS
        KGTKIVVPGQEPQPA+SGCCRS
Subjt:  KGTKIVVPGQEPQPASSGCCRS

SwissProt top hitse value%identityAlignment
P25766 Ras-related protein RGP11.7e-9883.64Show/hide
Query:  QKIDYVFKVVLIGDSAVGKSQLLSRFARNEFSLDSKATIGVEFQTKTLVIDQKAIKAQIWDTAGQERYRAVTSAYYRGAVGAMLIYDMTKRQSFDHIARW
        QKIDYVFKVVLIGDSAVGKSQLL+RFARNEF+LDSKATIGVEFQT+TL ID + +KAQIWDTAGQERYRAVTSAYYRGAVGAML+YD+TKRQSFDH+ARW
Subjt:  QKIDYVFKVVLIGDSAVGKSQLLSRFARNEFSLDSKATIGVEFQTKTLVIDQKAIKAQIWDTAGQERYRAVTSAYYRGAVGAMLIYDMTKRQSFDHIARW

Query:  LEELRGHADKNIVIMLIGNKSDLGSLRVVPTEDAKEFAQMENLFFMETSALEATNVETAFNTILTEIYRVISRKALIANEDTNSGGSSSLLKGTKIVVPG
        LEELRGHADKNIVIMLIGNKSDLG+LRVVPTEDAKEFA+ ENLFFMETSALE+TNVE AF T+LTEIYR++S+K L+ANE+ +S G+SSLLKGTKIVVPG
Subjt:  LEELRGHADKNIVIMLIGNKSDLGSLRVVPTEDAKEFAQMENLFFMETSALEATNVETAFNTILTEIYRVISRKALIANEDTNSGGSSSLLKGTKIVVPG

Query:  QEP-QPASSGCCRS
        QEP  P  + CC S
Subjt:  QEP-QPASSGCCRS

Q40191 Ras-related protein Rab11A2.2e-8574.07Show/hide
Query:  NQKIDYVFKVVLIGDSAVGKSQLLSRFARNEFSLDSKATIGVEFQTKTLVIDQKAIKAQIWDTAGQERYRAVTSAYYRGAVGAMLIYDMTKRQSFDHIAR
        N KIDYVFKVVLIGDSAVGKSQ+L+RFARNEFSLDSK+TIGVEFQT+TLVID K +KAQIWDTAGQERYRAVTSAYYRGAVGAML+YD+TKRQ+FDHI R
Subjt:  NQKIDYVFKVVLIGDSAVGKSQLLSRFARNEFSLDSKATIGVEFQTKTLVIDQKAIKAQIWDTAGQERYRAVTSAYYRGAVGAMLIYDMTKRQSFDHIAR

Query:  WLEELRGHADKNIVIMLIGNKSDLGSLRVVPTEDAKEFAQMENLFFMETSALEATNVETAFNTILTEIYRVISRKALIANEDTNSGGSSSLLKGTKIVVP
        WLEELR HADKNIVI+LIGNK DL + R VPTEDAKEFA+ E LFF+ETSALEATNVE+AF T+LTEIY ++++K+L A+E   +G S+S L G KI++P
Subjt:  WLEELRGHADKNIVIMLIGNKSDLGSLRVVPTEDAKEFAQMENLFFMETSALEATNVETAFNTILTEIYRVISRKALIANEDTNSGGSSSLLKGTKIVVP

Query:  G--QEPQPASSGCCRS
        G  QE     + CC++
Subjt:  G--QEPQPASSGCCRS

Q40522 Ras-related protein Rab11D1.6e-8373.02Show/hide
Query:  NQKIDYVFKVVLIGDSAVGKSQLLSRFARNEFSLDSKATIGVEFQTKTLVIDQKAIKAQIWDTAGQERYRAVTSAYYRGAVGAMLIYDMTKRQSFDHIAR
        +QKIDYVFKVVLIGDSAVGKSQ+L+RFARNEFSLDSKATIGVEFQT+TL I  K++KAQIWDTAGQERYRAVTSAYYRGAVGAML+YD+TKRQ+FDHI R
Subjt:  NQKIDYVFKVVLIGDSAVGKSQLLSRFARNEFSLDSKATIGVEFQTKTLVIDQKAIKAQIWDTAGQERYRAVTSAYYRGAVGAMLIYDMTKRQSFDHIAR

Query:  WLEELRGHADKNIVIMLIGNKSDLGSLRVVPTEDAKEFAQMENLFFMETSALEATNVETAFNTILTEIYRVISRKALIANEDTNSGGSSSLLKGTKIVVP
        WLEELR HAD+NIVIMLIGNK+DL   R VPTEDAKEFAQ E LFF+ETSA+EATN+E AF T+LTEI+ ++++K L A +D  S G+ + L G KI+VP
Subjt:  WLEELRGHADKNIVIMLIGNKSDLGSLRVVPTEDAKEFAQMENLFFMETSALEATNVETAFNTILTEIYRVISRKALIANEDTNSGGSSSLLKGTKIVVP

Query:  GQ-EPQPASSGCCRS
        G  +  P    CC S
Subjt:  GQ-EPQPASSGCCRS

Q9FE79 Ras-related protein RABA4c1.3e-9880.45Show/hide
Query:  MSNLQSTFNQKIDYVFKVVLIGDSAVGKSQLLSRFARNEFSLDSKATIGVEFQTKTLVIDQKAIKAQIWDTAGQERYRAVTSAYYRGAVGAMLIYDMTKR
        MS  QS FNQKIDYVFKVVLIGDSAVGKSQLL+RF+RNEFS++SKATIGVEFQT+TL ID+K IKAQIWDTAGQERYRAVTSAYYRGAVGAML+YD+TKR
Subjt:  MSNLQSTFNQKIDYVFKVVLIGDSAVGKSQLLSRFARNEFSLDSKATIGVEFQTKTLVIDQKAIKAQIWDTAGQERYRAVTSAYYRGAVGAMLIYDMTKR

Query:  QSFDHIARWLEELRGHADKNIVIMLIGNKSDLGSLRVVPTEDAKEFAQMENLFFMETSALEATNVETAFNTILTEIYRVISRKALIANEDTNSGGSSSLL
        QSFDH+ARWLEELRGHADKNIVIMLIGNK+DLG+LR VPTEDAKEFAQ ENLFFMETSAL++ NVE +F T+LTEIYR++S+K L+ANE+  SGG SSLL
Subjt:  QSFDHIARWLEELRGHADKNIVIMLIGNKSDLGSLRVVPTEDAKEFAQMENLFFMETSALEATNVETAFNTILTEIYRVISRKALIANEDTNSGGSSSLL

Query:  KGTKIVVPGQEPQPASSGCC
        +GTKIVV G+E +    GCC
Subjt:  KGTKIVVPGQEPQPASSGCC

Q9LH50 Ras-related protein RABA4d5.1e-9881.36Show/hide
Query:  MSNLQSTFNQKIDYVFKVVLIGDSAVGKSQLLSRFARNEFSLDSKATIGVEFQTKTLVIDQKAIKAQIWDTAGQERYRAVTSAYYRGAVGAMLIYDMTKR
        MSNL   +NQKIDYVFKVVLIGDSAVGK+QLL+RFARNEFS+DSKATIGVEFQTKTLVID K +KAQIWDTAGQERYRAVTSAYYRGAVGAML+YDMTKR
Subjt:  MSNLQSTFNQKIDYVFKVVLIGDSAVGKSQLLSRFARNEFSLDSKATIGVEFQTKTLVIDQKAIKAQIWDTAGQERYRAVTSAYYRGAVGAMLIYDMTKR

Query:  QSFDHIARWLEELRGHADKNIVIMLIGNKSDLGSLRVVPTEDAKEFAQMENLFFMETSALEATNVETAFNTILTEIYRVISRKALIANEDTNSGGSSSLL
        QSFDH+A+WLEELRGHADKNIVIMLIGNK DLGSLR VPTEDA+EFAQ ENLFFMETSALEATNVETAF TILTEIYR+IS+K+L A++D ++ G+SSLL
Subjt:  QSFDHIARWLEELRGHADKNIVIMLIGNKSDLGSLRVVPTEDAKEFAQMENLFFMETSALEATNVETAFNTILTEIYRVISRKALIANEDTNSGGSSSLL

Query:  KGTKIVVPGQEPQPASSGCC
        KGT+I++P ++      GCC
Subjt:  KGTKIVVPGQEPQPASSGCC

Arabidopsis top hitse value%identityAlignment
AT1G16920.1 RAB GTPase homolog A1B1.4e-7163.46Show/hide
Query:  DYVFKVVLIGDSAVGKSQLLSRFARNEFSLDSKATIGVEFQTKTLVIDQKAIKAQIWDTAGQERYRAVTSAYYRGAVGAMLIYDMTKRQSFDHIARWLEE
        DY+FKVVLIGDS VGKS LLSRF +NEF+L+SK+TIGVEF T+TL +D K +KAQIWDTAGQERYRA+TSAYYRGAVGA+L+YD+T+R +F+++ RWL+E
Subjt:  DYVFKVVLIGDSAVGKSQLLSRFARNEFSLDSKATIGVEFQTKTLVIDQKAIKAQIWDTAGQERYRAVTSAYYRGAVGAMLIYDMTKRQSFDHIARWLEE

Query:  LRGHADKNIVIMLIGNKSDLGSLRVVPTEDAKEFAQMENLFFMETSALEATNVETAFNTILTEIYRVISRKALIANEDTNSGGSSSLLKGTKIVVPGQEP
        L+ H D NIV+ML+GNKSDL  L  VPTED K +A+ E+L FMETSALEATNVE AF  +LT+IYR+ S+K + A ED    G++S+ KG KI V     
Subjt:  LRGHADKNIVIMLIGNKSDLGSLRVVPTEDAKEFAQMENLFFMETSALEATNVETAFNTILTEIYRVISRKALIANEDTNSGGSSSLLKGTKIVVPGQEP

Query:  QPASSGCC
             GCC
Subjt:  QPASSGCC

AT3G12160.1 RAB GTPase homolog A4D3.6e-9981.36Show/hide
Query:  MSNLQSTFNQKIDYVFKVVLIGDSAVGKSQLLSRFARNEFSLDSKATIGVEFQTKTLVIDQKAIKAQIWDTAGQERYRAVTSAYYRGAVGAMLIYDMTKR
        MSNL   +NQKIDYVFKVVLIGDSAVGK+QLL+RFARNEFS+DSKATIGVEFQTKTLVID K +KAQIWDTAGQERYRAVTSAYYRGAVGAML+YDMTKR
Subjt:  MSNLQSTFNQKIDYVFKVVLIGDSAVGKSQLLSRFARNEFSLDSKATIGVEFQTKTLVIDQKAIKAQIWDTAGQERYRAVTSAYYRGAVGAMLIYDMTKR

Query:  QSFDHIARWLEELRGHADKNIVIMLIGNKSDLGSLRVVPTEDAKEFAQMENLFFMETSALEATNVETAFNTILTEIYRVISRKALIANEDTNSGGSSSLL
        QSFDH+A+WLEELRGHADKNIVIMLIGNK DLGSLR VPTEDA+EFAQ ENLFFMETSALEATNVETAF TILTEIYR+IS+K+L A++D ++ G+SSLL
Subjt:  QSFDHIARWLEELRGHADKNIVIMLIGNKSDLGSLRVVPTEDAKEFAQMENLFFMETSALEATNVETAFNTILTEIYRVISRKALIANEDTNSGGSSSLL

Query:  KGTKIVVPGQEPQPASSGCC
        KGT+I++P ++      GCC
Subjt:  KGTKIVVPGQEPQPASSGCC

AT4G39990.1 RAB GTPase homolog A4B7.3e-8472.9Show/hide
Query:  KIDYVFKVVLIGDSAVGKSQLLSRFARNEFSLDSKATIGVEFQTKTLVIDQKAIKAQIWDTAGQERYRAVTSAYYRGAVGAMLIYDMTKRQSFDHIARWL
        K+DYVFKVVLIGDSAVGKSQLL+RFAR+EFS+DSKATIGVEFQT+TL I+QK+IKAQIWDTAGQERYRAVTSAYYRGAVGAML+YDMTKR++F+HI RWL
Subjt:  KIDYVFKVVLIGDSAVGKSQLLSRFARNEFSLDSKATIGVEFQTKTLVIDQKAIKAQIWDTAGQERYRAVTSAYYRGAVGAMLIYDMTKRQSFDHIARWL

Query:  EELRGHADKNIVIMLIGNKSDLGSLRVVPTEDAKEFAQMENLFFMETSALEATNVETAFNTILTEIYRVISRKALIANEDTNSGGSSSLLKGTKIVVP--
        EELR HADKNIVI+LIGNKSDL   R VPTEDAKEFA+ E LFF+ETSAL ATNVE +FNT++T+IY  +++K L +  D+N+ GS   L G KI++P  
Subjt:  EELRGHADKNIVIMLIGNKSDLGSLRVVPTEDAKEFAQMENLFFMETSALEATNVETAFNTILTEIYRVISRKALIANEDTNSGGSSSLLKGTKIVVP--

Query:  GQEPQPASSGCCRS
        GQE    +S CC S
Subjt:  GQEPQPASSGCCRS

AT5G47960.1 RAB GTPase homolog A4C9.5e-10080.45Show/hide
Query:  MSNLQSTFNQKIDYVFKVVLIGDSAVGKSQLLSRFARNEFSLDSKATIGVEFQTKTLVIDQKAIKAQIWDTAGQERYRAVTSAYYRGAVGAMLIYDMTKR
        MS  QS FNQKIDYVFKVVLIGDSAVGKSQLL+RF+RNEFS++SKATIGVEFQT+TL ID+K IKAQIWDTAGQERYRAVTSAYYRGAVGAML+YD+TKR
Subjt:  MSNLQSTFNQKIDYVFKVVLIGDSAVGKSQLLSRFARNEFSLDSKATIGVEFQTKTLVIDQKAIKAQIWDTAGQERYRAVTSAYYRGAVGAMLIYDMTKR

Query:  QSFDHIARWLEELRGHADKNIVIMLIGNKSDLGSLRVVPTEDAKEFAQMENLFFMETSALEATNVETAFNTILTEIYRVISRKALIANEDTNSGGSSSLL
        QSFDH+ARWLEELRGHADKNIVIMLIGNK+DLG+LR VPTEDAKEFAQ ENLFFMETSAL++ NVE +F T+LTEIYR++S+K L+ANE+  SGG SSLL
Subjt:  QSFDHIARWLEELRGHADKNIVIMLIGNKSDLGSLRVVPTEDAKEFAQMENLFFMETSALEATNVETAFNTILTEIYRVISRKALIANEDTNSGGSSSLL

Query:  KGTKIVVPGQEPQPASSGCC
        +GTKIVV G+E +    GCC
Subjt:  KGTKIVVPGQEPQPASSGCC

AT5G65270.1 RAB GTPase homolog A4A4.3e-8471.89Show/hide
Query:  NQKIDYVFKVVLIGDSAVGKSQLLSRFARNEFSLDSKATIGVEFQTKTLVIDQKAIKAQIWDTAGQERYRAVTSAYYRGAVGAMLIYDMTKRQSFDHIAR
        +QKIDYVFKVVLIGDSAVGKSQ+L+R+AR+EFSLDSKATIGVEFQT+TLVID K++KAQIWDTAGQERYRAVTSAYYRGAVGAML+YD+T+RQ+FDHI R
Subjt:  NQKIDYVFKVVLIGDSAVGKSQLLSRFARNEFSLDSKATIGVEFQTKTLVIDQKAIKAQIWDTAGQERYRAVTSAYYRGAVGAMLIYDMTKRQSFDHIAR

Query:  WLEELRGHADKNIVIMLIGNKSDLGSLRVVPTEDAKEFAQMENLFFMETSALEATNVETAFNTILTEIYRVISRKALIANEDTNSGGSSSLLKGTKIVV-
        WLEELR HADKNIVI+LIGNKSDL   R +PTEDAKEFA+ E LFF+ETSA  ATNVE+AF+T+LTEI+ ++++K+L A+ED  +G   S L G KI + 
Subjt:  WLEELRGHADKNIVIMLIGNKSDLGSLRVVPTEDAKEFAQMENLFFMETSALEATNVETAFNTILTEIYRVISRKALIANEDTNSGGSSSLLKGTKIVV-

Query:  --PGQEPQPASSGCCRS
          PGQ     S+ CC S
Subjt:  --PGQEPQPASSGCCRS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTAATTTGCAATCCACTTTCAATCAGAAGATTGATTATGTATTCAAGGTCGTCTTGATCGGGGATTCTGCGGTTGGGAAATCGCAACTCCTTTCTCGTTTT
GCTAGGAATGAGTTTAGTTTGGATTCCAAGGCCACAATTGGGGTTGAATTTCAGACCAAGACGCTTGTCATTGACCAGAAAGCTATCAAGGCGCAGATATGGGAT
ACTGCTGGACAGGAGAGGTATCGTGCAGTGACAAGTGCATACTACAGAGGTGCCGTTGGGGCAATGCTGATCTATGACATGACGAAGCGTCAGTCATTCGATCAT
ATAGCTAGGTGGTTGGAGGAACTGCGTGGCCATGCAGACAAGAATATTGTTATCATGCTTATAGGAAACAAGTCCGATCTAGGTTCTCTTCGTGTTGTGCCTACA
GAAGACGCAAAAGAGTTTGCTCAAATGGAGAATCTGTTTTTTATGGAAACATCAGCACTTGAGGCAACTAATGTAGAGACAGCATTCAATACCATACTGACAGAA
ATTTACCGAGTTATTAGCAGGAAGGCGCTGATTGCAAACGAGGACACCAATTCTGGAGGAAGCTCATCACTCCTCAAAGGAACTAAAATTGTTGTCCCTGGACAA
GAGCCCCAACCTGCAAGCTCTGGTTGTTGCAGGAGTTGA
mRNA sequenceShow/hide mRNA sequence
TGCTTTCCTCTTTCATGTCAAAACGCCTTCCCTTCGCTTCTTCCCATTTTCTTTTAACTCTTCGCTAAACCCCCTTTTTCCTTCATTCATTTTCCCTCCTCATTC
CCCCATTTCCTTTCATGTTCTTCTGATCAACCGCTTACTTCTAACACCAAATTCCCATCCCATCAAGCGATCGATTGATTGTTCCTCCTCTCGATCGATCGCTTG
GTGTTCCATTTCCCCCCGTCCTTTCATTTGAGGTGGATTCATATTTCAGATATGTCTAATTTGCAATCCACTTTCAATCAGAAGATTGATTATGTATTCAAGGTC
GTCTTGATCGGGGATTCTGCGGTTGGGAAATCGCAACTCCTTTCTCGTTTTGCTAGGAATGAGTTTAGTTTGGATTCCAAGGCCACAATTGGGGTTGAATTTCAG
ACCAAGACGCTTGTCATTGACCAGAAAGCTATCAAGGCGCAGATATGGGATACTGCTGGACAGGAGAGGTATCGTGCAGTGACAAGTGCATACTACAGAGGTGCC
GTTGGGGCAATGCTGATCTATGACATGACGAAGCGTCAGTCATTCGATCATATAGCTAGGTGGTTGGAGGAACTGCGTGGCCATGCAGACAAGAATATTGTTATC
ATGCTTATAGGAAACAAGTCCGATCTAGGTTCTCTTCGTGTTGTGCCTACAGAAGACGCAAAAGAGTTTGCTCAAATGGAGAATCTGTTTTTTATGGAAACATCA
GCACTTGAGGCAACTAATGTAGAGACAGCATTCAATACCATACTGACAGAAATTTACCGAGTTATTAGCAGGAAGGCGCTGATTGCAAACGAGGACACCAATTCT
GGAGGAAGCTCATCACTCCTCAAAGGAACTAAAATTGTTGTCCCTGGACAAGAGCCCCAACCTGCAAGCTCTGGTTGTTGCAGGAGTTGACACAGCTTTCTTCCT
TGGTTTCATCAAGATTTTCACATGAATTGCTCCTTTTTACAGCCTACACAAATGCAAACCCCCCTGGCCCCTAGAAGAGCAGAAGAAGAAGAAAGAGGGAAGCAA
ATCTCTATCTATTCTTTAATTTTGGTCTTTCAGGAGACTAGTGTAACTCATACTTTTGATCATACAAGGTAAATAGTTCCTCTGCTCTAAGCTTTTTGTTTAGAG
GTTTTATCACCAACATAATGTTCATTTTGATTGAGTAAAAGCTTCATATTGTCATTCTTATCTTCCTGTCTGGAAAACCTTTCAAACATAAATATGGGAGATGAC
TGAATTTCAGGAATGGTATACTCGACTAACTAACTTCCCCAGGTCCTGAGTAGAACAACTCAAAAGAAGTATTGAGAATTTTAGATTCAATATGTGTTTTGACTC
TTTATGCAACTTTGATAGATTTTAATTCTATATTACTAAACCCCAGTAACAGTAAGTAATACATTGACAATCAAGCCTTTGATGATGTATTGTTTACATTGAAGC
ACTAAATGGATCAAAATGTAACATAGGAACAAGCAAGAGAGGCTTGGCCATTCCTAAAGTCAACCCTTGTTTTGGTTGCATATCAACCTTAGTTTCTTCCCATTT
CCAACCACCTTCCAATCAAAGCACTGAACCAGAGTAGCCATTGTTGTATTCATCATGCTATATGCGAAGGTTGCACCGGGACATGCTCTCCTTCCTCCTCCGAAC
GAAATGAAGTCGAAACCATGTCCCTTATTGGTCTCAATTTGTTCTCGTTTTGACGATGAAGCCAAAAACCTCTTGGGACGAAATTCACTAGGTTCACTACACACT
TGAGGGTCTCTCATAATTGCAAAGAGATTGATTGCCACTGTTGTTTTGCATGGCACGTCGTAGCCTCCAATTTTGCAACTTTGACGAGATTCTCTTATTGTGACT
GATACTGGTGGGTAGTGCCTCAAAGTTTCCTTCACAACAGCTTGCAAGTAAGAGAGTTGAGGAATGTCTTCTTCTTCCACAAGTCTTCGTGAAGTTCCAACCACT
GATTCTATTTCCTTTCTAACCCTTTTCAACACTTCAGGATGGTTGATTACTTCAGGTATTGCCCACTGAATGCCTACTGCTGAAGTATCTGTACCAGCCATGAAT
AAATCCTTTTTTTTTTTTCAATGAATTAGTAAGTCCATACATGAGAAGCCAACACACGAAGTAATAACTGCCATTGGTTAAGTTTCAAGTTTAGCCTATGAACTT
TCAAGTTTGTGTCTATTTGGTCC
Protein sequenceShow/hide protein sequence
MSNLQSTFNQKIDYVFKVVLIGDSAVGKSQLLSRFARNEFSLDSKATIGVEFQTKTLVIDQKAIKAQIWDTAGQERYRAVTSAYYRGAVGAMLIYDMTKRQSFDH
IARWLEELRGHADKNIVIMLIGNKSDLGSLRVVPTEDAKEFAQMENLFFMETSALEATNVETAFNTILTEIYRVISRKALIANEDTNSGGSSSLLKGTKIVVPGQ
EPQPASSGCCRS