; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CcUC10G199530 (gene) of Watermelon (PI 537277) v1 genome

Gene IDCcUC10G199530
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionF-box domain-containing protein
Genome locationCicolChr10:26358532..26359332
RNA-Seq ExpressionCcUC10G199530
SyntenyCcUC10G199530
Gene Ontology termsNA
InterPro domainsIPR011043 - Galactose oxidase/kelch, beta-propeller
IPR013187 - F-box associated domain, type 3
IPR017451 - F-box associated interaction domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN59658.1 hypothetical protein Csa_001357 [Cucumis sativus]1.3e-3339.85Show/hide
Query:  YGFGFSPNIKQYKIV-----RIPRVTTN-------GLFVADIFTFDTLGTCSIGKWTSVSIMPFTTIGRNDGFYLNGRLYWIGSLVVGRVNSHCLLCFDV
        +GFG+SPN KQYKIV     +IP + ++         +VA+IFT         GKW   + +P   +  + G YLNG LYW          +  LL FDV
Subjt:  YGFGFSPNIKQYKIV-----RIPRVTTN-------GLFVADIFTFDTLGTCSIGKWTSVSIMPFTTIGRNDGFYLNGRLYWIGSLVVGRVNSHCLLCFDV

Query:  EHENFEEICFPGVGRQPVGTLVSCFEIQVFNGSLYLSGFDFE-SCWDFHVWKMMEQDCSWTK---EFVVPLLFHPR-----AYYSRDYMISKFYHLQFIK
        E E FE + FP V R     + S   I +FN +LY+S FD +     FHVWKMME+D SW K   +F +              Y RDYMI    H Q IK
Subjt:  EHENFEEICFPGVGRQPVGTLVSCFEIQVFNGSLYLSGFDFE-SCWDFHVWKMMEQDCSWTK---EFVVPLLFHPR-----AYYSRDYMISKFYHLQFIK

Query:  AFEDGKFLFAVFQMELILYDPKTKKTEALDHKLYHGIEEKLWIYEIDSFNFGSIPNILGLN
         FED   LF + Q  LILYD K  + EA+  +L    + KL I+EIDS NF S+   LG+N
Subjt:  AFEDGKFLFAVFQMELILYDPKTKKTEALDHKLYHGIEEKLWIYEIDSFNFGSIPNILGLN

KGN59660.1 hypothetical protein Csa_001105 [Cucumis sativus]1.7e-4141.5Show/hide
Query:  MTNEYMEVPTVDCAMNFDHHMHHHGYGFGFSPNIKQYKIVRIPRVTTNGLFVADIFTFDTLGTCSIGKWTSVSIM-PFTTIGRNDGFYLNGRLYWIG---
        +TNEY+E+P  D      +    + +GFG+SPN KQYKIV++  +   GL+VADIFT  T    S GKW+ V I+  F  +G  DG YLNG LYW G   
Subjt:  MTNEYMEVPTVDCAMNFDHHMHHHGYGFGFSPNIKQYKIVRIPRVTTNGLFVADIFTFDTLGTCSIGKWTSVSIM-PFTTIGRNDGFYLNGRLYWIG---

Query:  -SLVVGRVNSHCLLCFDVEHENFEEICFP-GVGRQPVGTLVSCFEIQVFNGSLYLSGFDFES---CWDFHVWKMMEQDCSWTK---EFVV--PLLFH---
          L +       LL FDVE E FE + FP GV  +          I +FN +LYLS FDF +      FHVWK+ME+  SW K   EFV+  P+  H   
Subjt:  -SLVVGRVNSHCLLCFDVEHENFEEICFP-GVGRQPVGTLVSCFEIQVFNGSLYLSGFDFES---CWDFHVWKMMEQDCSWTK---EFVV--PLLFH---

Query:  -----------PRAYYSRDYMISKFYHLQFIKAFEDGKFLFAVFQMELILYDPKTKKTEALDHKLYHGIEEKLWIYEID-SFNFGSIPNILGLN
                    R YY      ++ YH Q IK FED K LF + +  LILYD KT++ E   + L    + KLWIY+ID S N  S+P  LG+N
Subjt:  -----------PRAYYSRDYMISKFYHLQFIKAFEDGKFLFAVFQMELILYDPKTKKTEALDHKLYHGIEEKLWIYEID-SFNFGSIPNILGLN

XP_004135796.1 putative F-box protein At1g46984 [Cucumis sativus]6.2e-3138.81Show/hide
Query:  MTNEYMEVPTVDCAMNFDHHMHHHGYGFGFSPNIKQYKIVRIPRVTTNGLFVADIFTFDTLGTCSIGKWTSVSIMPFTTIGRNDGFYLNGRLYWIGS--L
        +TNEY ++PT   + +    + ++ YG GFSP   QYK+ R     T+  F+ DIF F T  +C   +WT V  +P   +    G YLNG LYW+GS  L
Subjt:  MTNEYMEVPTVDCAMNFDHHMHHHGYGFGFSPNIKQYKIVRIPRVTTNGLFVADIFTFDTLGTCSIGKWTSVSIMPFTTIGRNDGFYLNGRLYWIGS--L

Query:  VVGRVNSHCLLCF--DVEHENFEEICFP-GVGRQPVGTLVSCFEIQVFNGSLYLSGFDFESCWDFHVWKMMEQDCSWTKEFVVPLLFHPRAYYS-RDYMI
          G ++ +  + +  D++ E FE+I FP   G  P         I V+NG+LYL+ F  E  +D+H WK ME+D SW+KEFV+ L      ++S R + I
Subjt:  VVGRVNSHCLLCF--DVEHENFEEICFP-GVGRQPVGTLVSCFEIQVFNGSLYLSGFDFESCWDFHVWKMMEQDCSWTKEFVVPLLFHPRAYYS-RDYMI

Query:  SKFYHLQFIKAFEDGKFLFAVFQMELILYDPKTKKTEALDHKLYHGIEEKLWIYEIDSFNFGSIPNIL
           Y+LQ IK  EDG  L     + LILYDP T+  E L ++ +  I+E +W+++I+SF+F S+ NIL
Subjt:  SKFYHLQFIKAFEDGKFLFAVFQMELILYDPKTKKTEALDHKLYHGIEEKLWIYEIDSFNFGSIPNIL

XP_011652871.1 F-box/kelch-repeat protein At3g06240 [Cucumis sativus]1.7e-4141.5Show/hide
Query:  MTNEYMEVPTVDCAMNFDHHMHHHGYGFGFSPNIKQYKIVRIPRVTTNGLFVADIFTFDTLGTCSIGKWTSVSIM-PFTTIGRNDGFYLNGRLYWIG---
        +TNEY+E+P  D      +    + +GFG+SPN KQYKIV++  +   GL+VADIFT  T    S GKW+ V I+  F  +G  DG YLNG LYW G   
Subjt:  MTNEYMEVPTVDCAMNFDHHMHHHGYGFGFSPNIKQYKIVRIPRVTTNGLFVADIFTFDTLGTCSIGKWTSVSIM-PFTTIGRNDGFYLNGRLYWIG---

Query:  -SLVVGRVNSHCLLCFDVEHENFEEICFP-GVGRQPVGTLVSCFEIQVFNGSLYLSGFDFES---CWDFHVWKMMEQDCSWTK---EFVV--PLLFH---
          L +       LL FDVE E FE + FP GV  +          I +FN +LYLS FDF +      FHVWK+ME+  SW K   EFV+  P+  H   
Subjt:  -SLVVGRVNSHCLLCFDVEHENFEEICFP-GVGRQPVGTLVSCFEIQVFNGSLYLSGFDFES---CWDFHVWKMMEQDCSWTK---EFVV--PLLFH---

Query:  -----------PRAYYSRDYMISKFYHLQFIKAFEDGKFLFAVFQMELILYDPKTKKTEALDHKLYHGIEEKLWIYEID-SFNFGSIPNILGLN
                    R YY      ++ YH Q IK FED K LF + +  LILYD KT++ E   + L    + KLWIY+ID S N  S+P  LG+N
Subjt:  -----------PRAYYSRDYMISKFYHLQFIKAFEDGKFLFAVFQMELILYDPKTKKTEALDHKLYHGIEEKLWIYEID-SFNFGSIPNILGLN

XP_038880514.1 putative F-box protein At1g46984 [Benincasa hispida]9.5e-3239.62Show/hide
Query:  MTNEYMEVPTVDCAMNFDHHMHHHGYGFGFSPNIKQYKIVRIPRVTTNGLFVADIFTFDTLGTCSIGKWTSVSIMPFTTIGRNDGFYLNGRLYWIGSLVV
        MTNEY ++PT     +    +  + YG GFSP  KQYK+ R   V     F+ +IF F T  +C   +WT V  +P+  +    G Y NG LYW+G   +
Subjt:  MTNEYMEVPTVDCAMNFDHHMHHHGYGFGFSPNIKQYKIVRIPRVTTNGLFVADIFTFDTLGTCSIGKWTSVSIMPFTTIGRNDGFYLNGRLYWIGSLVV

Query:  GRVN-SHCLLCFDVEHENFEEICFPGVGRQPVGTLVSCFEIQVFNGSLYLSGFDFESCWDF--HVWKMMEQDCSWTKEFVVPLLFHPRAYYSRDYMISKF
             S  +   D+E + F++I FP  G    G       I V+N +LYL+      C DF  HVWK ME+D SW KEFV+ L  +      R + I   
Subjt:  GRVN-SHCLLCFDVEHENFEEICFPGVGRQPVGTLVSCFEIQVFNGSLYLSGFDFESCWDF--HVWKMMEQDCSWTKEFVVPLLFHPRAYYSRDYMISKF

Query:  YHLQFIKAFEDGKFLFAVFQMELILYDPKTKKTEALDHKLYHGIEEKLWIYEIDSFNFGSIPNIL
        Y LQ IKA EDG  L     + LILYDPKT+ TE L  + +  I++ +W+Y+IDSFNF S+ NIL
Subjt:  YHLQFIKAFEDGKFLFAVFQMELILYDPKTKKTEALDHKLYHGIEEKLWIYEIDSFNFGSIPNIL

TrEMBL top hitse value%identityAlignment
A0A0A0LCB8 F-box domain-containing protein8.4e-4241.5Show/hide
Query:  MTNEYMEVPTVDCAMNFDHHMHHHGYGFGFSPNIKQYKIVRIPRVTTNGLFVADIFTFDTLGTCSIGKWTSVSIM-PFTTIGRNDGFYLNGRLYWIG---
        +TNEY+E+P  D      +    + +GFG+SPN KQYKIV++  +   GL+VADIFT  T    S GKW+ V I+  F  +G  DG YLNG LYW G   
Subjt:  MTNEYMEVPTVDCAMNFDHHMHHHGYGFGFSPNIKQYKIVRIPRVTTNGLFVADIFTFDTLGTCSIGKWTSVSIM-PFTTIGRNDGFYLNGRLYWIG---

Query:  -SLVVGRVNSHCLLCFDVEHENFEEICFP-GVGRQPVGTLVSCFEIQVFNGSLYLSGFDFES---CWDFHVWKMMEQDCSWTK---EFVV--PLLFH---
          L +       LL FDVE E FE + FP GV  +          I +FN +LYLS FDF +      FHVWK+ME+  SW K   EFV+  P+  H   
Subjt:  -SLVVGRVNSHCLLCFDVEHENFEEICFP-GVGRQPVGTLVSCFEIQVFNGSLYLSGFDFES---CWDFHVWKMMEQDCSWTK---EFVV--PLLFH---

Query:  -----------PRAYYSRDYMISKFYHLQFIKAFEDGKFLFAVFQMELILYDPKTKKTEALDHKLYHGIEEKLWIYEID-SFNFGSIPNILGLN
                    R YY      ++ YH Q IK FED K LF + +  LILYD KT++ E   + L    + KLWIY+ID S N  S+P  LG+N
Subjt:  -----------PRAYYSRDYMISKFYHLQFIKAFEDGKFLFAVFQMELILYDPKTKKTEALDHKLYHGIEEKLWIYEID-SFNFGSIPNILGLN

A0A0A0LCZ3 F-box domain-containing protein6.4e-3439.85Show/hide
Query:  YGFGFSPNIKQYKIV-----RIPRVTTN-------GLFVADIFTFDTLGTCSIGKWTSVSIMPFTTIGRNDGFYLNGRLYWIGSLVVGRVNSHCLLCFDV
        +GFG+SPN KQYKIV     +IP + ++         +VA+IFT         GKW   + +P   +  + G YLNG LYW          +  LL FDV
Subjt:  YGFGFSPNIKQYKIV-----RIPRVTTN-------GLFVADIFTFDTLGTCSIGKWTSVSIMPFTTIGRNDGFYLNGRLYWIGSLVVGRVNSHCLLCFDV

Query:  EHENFEEICFPGVGRQPVGTLVSCFEIQVFNGSLYLSGFDFE-SCWDFHVWKMMEQDCSWTK---EFVVPLLFHPR-----AYYSRDYMISKFYHLQFIK
        E E FE + FP V R     + S   I +FN +LY+S FD +     FHVWKMME+D SW K   +F +              Y RDYMI    H Q IK
Subjt:  EHENFEEICFPGVGRQPVGTLVSCFEIQVFNGSLYLSGFDFE-SCWDFHVWKMMEQDCSWTK---EFVVPLLFHPR-----AYYSRDYMISKFYHLQFIK

Query:  AFEDGKFLFAVFQMELILYDPKTKKTEALDHKLYHGIEEKLWIYEIDSFNFGSIPNILGLN
         FED   LF + Q  LILYD K  + EA+  +L    + KL I+EIDS NF S+   LG+N
Subjt:  AFEDGKFLFAVFQMELILYDPKTKKTEALDHKLYHGIEEKLWIYEIDSFNFGSIPNILGLN

A0A0A0M1M5 F-box domain-containing protein3.0e-3138.81Show/hide
Query:  MTNEYMEVPTVDCAMNFDHHMHHHGYGFGFSPNIKQYKIVRIPRVTTNGLFVADIFTFDTLGTCSIGKWTSVSIMPFTTIGRNDGFYLNGRLYWIGS--L
        +TNEY ++PT   + +    + ++ YG GFSP   QYK+ R     T+  F+ DIF F T  +C   +WT V  +P   +    G YLNG LYW+GS  L
Subjt:  MTNEYMEVPTVDCAMNFDHHMHHHGYGFGFSPNIKQYKIVRIPRVTTNGLFVADIFTFDTLGTCSIGKWTSVSIMPFTTIGRNDGFYLNGRLYWIGS--L

Query:  VVGRVNSHCLLCF--DVEHENFEEICFP-GVGRQPVGTLVSCFEIQVFNGSLYLSGFDFESCWDFHVWKMMEQDCSWTKEFVVPLLFHPRAYYS-RDYMI
          G ++ +  + +  D++ E FE+I FP   G  P         I V+NG+LYL+ F  E  +D+H WK ME+D SW+KEFV+ L      ++S R + I
Subjt:  VVGRVNSHCLLCF--DVEHENFEEICFP-GVGRQPVGTLVSCFEIQVFNGSLYLSGFDFESCWDFHVWKMMEQDCSWTKEFVVPLLFHPRAYYS-RDYMI

Query:  SKFYHLQFIKAFEDGKFLFAVFQMELILYDPKTKKTEALDHKLYHGIEEKLWIYEIDSFNFGSIPNIL
           Y+LQ IK  EDG  L     + LILYDP T+  E L ++ +  I+E +W+++I+SF+F S+ NIL
Subjt:  SKFYHLQFIKAFEDGKFLFAVFQMELILYDPKTKKTEALDHKLYHGIEEKLWIYEIDSFNFGSIPNIL

A0A5D3CIX9 Putative F-box protein2.6e-2734.83Show/hide
Query:  MTNEYMEVPTVDCAMNFDHHMHHHGYGFGFSPNIKQYKIVRIPRVTTNGLFVADIFTFDTLGTCSIGKWTSVSIMPFTTIGRNDGFYLNGRLYWIGS---
        +TNEY + P +         + ++ YG GFSP   QYK+ R      +  F+ DIF F T  +C   +WT +  +P   +    G Y NG LYW+GS   
Subjt:  MTNEYMEVPTVDCAMNFDHHMHHHGYGFGFSPNIKQYKIVRIPRVTTNGLFVADIFTFDTLGTCSIGKWTSVSIMPFTTIGRNDGFYLNGRLYWIGS---

Query:  LVVGRVNSHCLLCF--DVEHENFEEICFPGVGRQPVGTLVSCFEIQVFNGSLYLSGFDFESCWDFHVWKMMEQDCSWTKEFVVPLLFHPRAYYSRDYMIS
        L  G ++ +  + +  D+  E F++I  P  G +P         + V+NG+LYL+    +  +D+HVWKM E D SW+KEFV+ L  +      R + I 
Subjt:  LVVGRVNSHCLLCF--DVEHENFEEICFPGVGRQPVGTLVSCFEIQVFNGSLYLSGFDFESCWDFHVWKMMEQDCSWTKEFVVPLLFHPRAYYSRDYMIS

Query:  KFYHLQFIKAFEDGKFLFAVFQMELILYDPKTKKTEALDHKLYHGIEEKLWIYEIDSFNFGSIPNIL
          Y+LQ +K  EDG  L     + LI+YDPKT++ E L  + +  I+E +W ++I+SF+F S+ N L
Subjt:  KFYHLQFIKAFEDGKFLFAVFQMELILYDPKTKKTEALDHKLYHGIEEKLWIYEIDSFNFGSIPNIL

A0A6J1CQE2 F-box/kelch-repeat protein At3g06240-like1.2e-2737.97Show/hide
Query:  MTNEYMEVPTVDCAMNFDHHMHHHGYGFGFSPNIKQYKIVRIPRVTTNGLFVADIFTFDTLGTCSIGKWTSVSIMPFTTIGRNDGFYLNGRLYWIGSLVV
        MTNEY + P      N      ++ Y FGFSP  KQYK+VR          + + FTF T   C   K T VS +P +        Y NG LYWIG  + 
Subjt:  MTNEYMEVPTVDCAMNFDHHMHHHGYGFGFSPNIKQYKIVRIPRVTTNGLFVADIFTFDTLGTCSIGKWTSVSIMPFTTIGRNDGFYLNGRLYWIGSLVV

Query:  GRVNSHCLLCFDVEHENFEEICFPGVGRQPVGTLVSCFEIQVFNGSLYLSGFDFESCWDFHVWKMMEQDCSWTKEFVVPL----LFHPRAYYSRDYMISK
           N   L   D+E E  +EI FP  G         C  I VFNGSLYL+         +HVWK ME+D SWTK F V L    + H R Y S+      
Subjt:  GRVNSHCLLCFDVEHENFEEICFPGVGRQPVGTLVSCFEIQVFNGSLYLSGFDFESCWDFHVWKMMEQDCSWTKEFVVPL----LFHPRAYYSRDYMISK

Query:  FYHLQFIKAFEDGKFLFAVFQMELILYDPKTKKTEALDHKLYHGIEEKLWIYEIDSFNFGSIPNIL
           LQ I+A +DGK L  +  ++LILY+ KT++ E+L ++ +  I++   ++ IDSFNF S+  IL
Subjt:  FYHLQFIKAFEDGKFLFAVFQMELILYDPKTKKTEALDHKLYHGIEEKLWIYEIDSFNFGSIPNIL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACGAATGAGTACATGGAAGTTCCTACCGTCGATTGTGCTATGAATTTTGATCATCACATGCATCACCACGGCTATGGATTTGGTTTTAGTCCCAACATAAAACAATA
CAAAATAGTTAGAATTCCTAGAGTGACAACGAATGGATTATTTGTAGCAGATATTTTTACATTTGACACACTTGGAACATGTAGTATTGGAAAATGGACTAGTGTTTCCA
TTATGCCGTTTACTACTATTGGCCGGAACGATGGTTTTTACTTGAATGGACGTCTTTATTGGATTGGAAGTCTTGTTGTTGGTCGTGTTAATAGTCATTGCCTTCTATGT
TTTGATGTAGAGCATGAGAATTTTGAAGAAATTTGTTTTCCTGGAGTTGGCCGACAACCCGTTGGAACATTAGTTTCTTGTTTTGAAATTCAAGTATTTAATGGCAGCCT
CTATCTCTCTGGTTTCGACTTTGAAAGTTGTTGGGACTTCCATGTGTGGAAGATGATGGAACAAGATTGTTCATGGACTAAAGAATTTGTTGTCCCATTACTCTTTCATC
CGAGGGCTTATTATTCTAGAGATTATATGATTAGTAAATTTTATCATCTCCAATTCATCAAAGCTTTTGAAGATGGAAAGTTCTTGTTTGCTGTTTTCCAAATGGAATTA
ATCTTGTATGATCCCAAGACCAAGAAGACAGAAGCATTGGATCATAAACTATATCATGGAATAGAAGAAAAATTATGGATTTATGAAATTGATTCGTTTAATTTTGGTTC
TATCCCAAACATTTTAGGTTTAAATTCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGACGAATGAGTACATGGAAGTTCCTACCGTCGATTGTGCTATGAATTTTGATCATCACATGCATCACCACGGCTATGGATTTGGTTTTAGTCCCAACATAAAACAATA
CAAAATAGTTAGAATTCCTAGAGTGACAACGAATGGATTATTTGTAGCAGATATTTTTACATTTGACACACTTGGAACATGTAGTATTGGAAAATGGACTAGTGTTTCCA
TTATGCCGTTTACTACTATTGGCCGGAACGATGGTTTTTACTTGAATGGACGTCTTTATTGGATTGGAAGTCTTGTTGTTGGTCGTGTTAATAGTCATTGCCTTCTATGT
TTTGATGTAGAGCATGAGAATTTTGAAGAAATTTGTTTTCCTGGAGTTGGCCGACAACCCGTTGGAACATTAGTTTCTTGTTTTGAAATTCAAGTATTTAATGGCAGCCT
CTATCTCTCTGGTTTCGACTTTGAAAGTTGTTGGGACTTCCATGTGTGGAAGATGATGGAACAAGATTGTTCATGGACTAAAGAATTTGTTGTCCCATTACTCTTTCATC
CGAGGGCTTATTATTCTAGAGATTATATGATTAGTAAATTTTATCATCTCCAATTCATCAAAGCTTTTGAAGATGGAAAGTTCTTGTTTGCTGTTTTCCAAATGGAATTA
ATCTTGTATGATCCCAAGACCAAGAAGACAGAAGCATTGGATCATAAACTATATCATGGAATAGAAGAAAAATTATGGATTTATGAAATTGATTCGTTTAATTTTGGTTC
TATCCCAAACATTTTAGGTTTAAATTCTTGA
Protein sequenceShow/hide protein sequence
MTNEYMEVPTVDCAMNFDHHMHHHGYGFGFSPNIKQYKIVRIPRVTTNGLFVADIFTFDTLGTCSIGKWTSVSIMPFTTIGRNDGFYLNGRLYWIGSLVVGRVNSHCLLC
FDVEHENFEEICFPGVGRQPVGTLVSCFEIQVFNGSLYLSGFDFESCWDFHVWKMMEQDCSWTKEFVVPLLFHPRAYYSRDYMISKFYHLQFIKAFEDGKFLFAVFQMEL
ILYDPKTKKTEALDHKLYHGIEEKLWIYEIDSFNFGSIPNILGLNS