; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CcUC10G199540 (gene) of Watermelon (PI 537277) v1 genome

Gene IDCcUC10G199540
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionF-box domain-containing protein
Genome locationCicolChr10:26361638..26362429
RNA-Seq ExpressionCcUC10G199540
SyntenyCcUC10G199540
Gene Ontology termsNA
InterPro domainsIPR013187 - F-box associated domain, type 3
IPR017451 - F-box associated interaction domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN59658.1 hypothetical protein Csa_001357 [Cucumis sativus]2.9e-4142.76Show/hide
Query:  MTNECIELPPLDYSMEFYSCHLGYGFGFNPNKKQYKIVRLARV-IPN-----------GLFMANIFTFG--LSSSRGKW----ISSVPLLSFYAINGDND
        MTNE +    L+ S++FY     +GFG++PNKKQYKIV+L+ + IP+             ++A IFT G       GKW    + +V +L  +       
Subjt:  MTNECIELPPLDYSMEFYSCHLGYGFGFNPNKKQYKIVRLARV-IPN-----------GLFMANIFTFG--LSSSRGKW----ISSVPLLSFYAINGDND

Query:  GVYLNGHLYWNGYNKIEDRDTVRNPILLRFNVEDEKFQEVSFPRSGDDGAFFPCSHIHVFNGTLYLSGFD--FEGGKFHVWKMARD--SWIK---EFVIS
        GVYLNG LYW  YN    R    N +LLRF+VEDEKF+ VSFP+   D AF   S+I +FN TLY+S FD   + G FHVWKM  +  SW+K   +F I 
Subjt:  GVYLNGHLYWNGYNKIEDRDTVRNPILLRFNVEDEKFQEVSFPRSGDDGAFFPCSHIHVFNGTLYLSGFD--FEGGKFHVWKMARD--SWIK---EFVIS

Query:  LS---SVSMVVHCYIKYYKGSKYHLQLIKTIEDGKILCLAFGRDLILYDSKTKQTVIVDDKLQDGTKEKLWVYEIEPFNFGSLTKILGVN
         S     S+++  YI+ Y   + H QLIK  ED  +L L   R LILYDSK  Q   V D+L      KL ++EI+  NF SL K LGVN
Subjt:  LS---SVSMVVHCYIKYYKGSKYHLQLIKTIEDGKILCLAFGRDLILYDSKTKQTVIVDDKLQDGTKEKLWVYEIEPFNFGSLTKILGVN

KGN59660.1 hypothetical protein Csa_001105 [Cucumis sativus]6.3e-5246.21Show/hide
Query:  MTNECIELPPLDYSMEFYSCHLGYGFGFNPNKKQYKIVRLARVIPNGLFMANIFTFG--LSSSRGKWISSVPLLSFYAINGDNDGVYLNGHLYWNGYN-K
        +TNE +ELP  D   + +     +GFG++PNKKQYKIV+L+  I  GL++A+IFT G     S GKW S VP+L  + + G  DGVYLNG LYWNGYN  
Subjt:  MTNECIELPPLDYSMEFYSCHLGYGFGFNPNKKQYKIVRLARVIPNGLFMANIFTFG--LSSSRGKWISSVPLLSFYAINGDNDGVYLNGHLYWNGYN-K

Query:  IEDRDTVRNPILLRFNVEDEKFQEVSFPRSGDDGAFFPCSHIHVFNGTLYLSGFDFEG----GKFHVWKMARD--SWIK---EFVISLS-----SVSMVV
          D       +LLRF+VEDEKF+ VSFP   +D  F   S+I +FN TLYLS FDF      G+FHVWK+  +  SW K   EFVI        S   ++
Subjt:  IEDRDTVRNPILLRFNVEDEKFQEVSFPRSGDDGAFFPCSHIHVFNGTLYLSGFDFEG----GKFHVWKMARD--SWIK---EFVISLS-----SVSMVV

Query:  HCYIKY--YKG--------SKYHLQLIKTIEDGKILCLAFGRDLILYDSKTKQTVIVDDKLQDGTKEKLWVYEIE-PFNFGSLTKILGVN
        H YI+Y  Y+G        ++YH QLIK  ED K+L L   + LILYDSKT+Q  +  + L      KLW+Y+I+   N  SL K LGVN
Subjt:  HCYIKY--YKG--------SKYHLQLIKTIEDGKILCLAFGRDLILYDSKTKQTVIVDDKLQDGTKEKLWVYEIE-PFNFGSLTKILGVN

XP_011652871.1 F-box/kelch-repeat protein At3g06240 [Cucumis sativus]6.3e-5246.21Show/hide
Query:  MTNECIELPPLDYSMEFYSCHLGYGFGFNPNKKQYKIVRLARVIPNGLFMANIFTFG--LSSSRGKWISSVPLLSFYAINGDNDGVYLNGHLYWNGYN-K
        +TNE +ELP  D   + +     +GFG++PNKKQYKIV+L+  I  GL++A+IFT G     S GKW S VP+L  + + G  DGVYLNG LYWNGYN  
Subjt:  MTNECIELPPLDYSMEFYSCHLGYGFGFNPNKKQYKIVRLARVIPNGLFMANIFTFG--LSSSRGKWISSVPLLSFYAINGDNDGVYLNGHLYWNGYN-K

Query:  IEDRDTVRNPILLRFNVEDEKFQEVSFPRSGDDGAFFPCSHIHVFNGTLYLSGFDFEG----GKFHVWKMARD--SWIK---EFVISLS-----SVSMVV
          D       +LLRF+VEDEKF+ VSFP   +D  F   S+I +FN TLYLS FDF      G+FHVWK+  +  SW K   EFVI        S   ++
Subjt:  IEDRDTVRNPILLRFNVEDEKFQEVSFPRSGDDGAFFPCSHIHVFNGTLYLSGFDFEG----GKFHVWKMARD--SWIK---EFVISLS-----SVSMVV

Query:  HCYIKY--YKG--------SKYHLQLIKTIEDGKILCLAFGRDLILYDSKTKQTVIVDDKLQDGTKEKLWVYEIE-PFNFGSLTKILGVN
        H YI+Y  Y+G        ++YH QLIK  ED K+L L   + LILYDSKT+Q  +  + L      KLW+Y+I+   N  SL K LGVN
Subjt:  HCYIKY--YKG--------SKYHLQLIKTIEDGKILCLAFGRDLILYDSKTKQTVIVDDKLQDGTKEKLWVYEIE-PFNFGSLTKILGVN

XP_023516660.1 F-box protein At3g07870-like [Cucurbita pepo subsp. pepo]7.7e-3438.26Show/hide
Query:  MTNECIELPPLDYSMEFYSCHLGYGFGFNPNKKQYKIVRLARVIPNGL---FMANIFTFGLSSSRGKWISSVPLLSFYAINGDNDGVYLNGHLYWNGYNK
        MTNE  ELP  ++   + +C   YGFGF P  K YK+VR + V        + + IF FG   +R +W         Y+ NG + GVYLNG L+W G   
Subjt:  MTNECIELPPLDYSMEFYSCHLGYGFGFNPNKKQYKIVRLARVIPNGL---FMANIFTFGLSSSRGKWISSVPLLSFYAINGDNDGVYLNGHLYWNGYNK

Query:  IEDRDTVRNPILLRFNVEDEKFQEVSFPRSGDDGAFFPCSHIHVFNGTLYLSGFDFEGGKFHVWKMARD-SWIKEFVISLSSVSMVVHCYIKYYKGSKYH
           +D + + ++ R N+EDEK++ + FP   DDG +FPC  I VFNG L+L+    EG ++ +WKM  D SWIK F  S+  VS  +  +      S+  
Subjt:  IEDRDTVRNPILLRFNVEDEKFQEVSFPRSGDDGAFFPCSHIHVFNGTLYLSGFDFEGGKFHVWKMARD-SWIKEFVISLSSVSMVVHCYIKYYKGSKYH

Query:  LQLIKTIEDGKILCLAFGRDLILYDSKTKQTVIVDDKLQDGT-KEKLWVYEIEPFNFGSLTKIL
        ++ +K  +DGKILC+  G +L+LYD KT++     +KL D T   + W++ I  FNF +L+ IL
Subjt:  LQLIKTIEDGKILCLAFGRDLILYDSKTKQTVIVDDKLQDGT-KEKLWVYEIEPFNFGSLTKIL

XP_038880514.1 putative F-box protein At1g46984 [Benincasa hispida]5.1e-3842.42Show/hide
Query:  MTNECIELPPLDYSMEFYSCHLGYGFGFNPNKKQYKIVRLARVIPNGLFMANIFTFGLSSSRGKW--ISSVPLLSFYAINGDNDGVYLNGHLYWNGYNKI
        MTNE  +LP      +    +  YG GF+P  KQYK+ R   V     F+  IF FG S    +W  + SVP    Y +N +  GVY NG LYW G  ++
Subjt:  MTNECIELPPLDYSMEFYSCHLGYGFGFNPNKKQYKIVRLARVIPNGLFMANIFTFGLSSSRGKW--ISSVPLLSFYAINGDNDGVYLNGHLYWNGYNKI

Query:  EDRDTVRNPILLRFNVEDEKFQEVSFPRSGDDGAFFPCSHIHVFNGTLYLS--GFDFEGGKFHVWKMARD-SWIKEFVISLSSVSMVVHCYIKYYKGSKY
         +     + ++ R ++ED+KF+++SFP  GDD   FP  +I V+N TLYL+    DFE   +HVWKM  D SWIKEFV++L      VH  +  +    Y
Subjt:  EDRDTVRNPILLRFNVEDEKFQEVSFPRSGDDGAFFPCSHIHVFNGTLYLS--GFDFEGGKFHVWKMARD-SWIKEFVISLSSVSMVVHCYIKYYKGSKY

Query:  HLQLIKTIEDGKILCLAFGRDLILYDSKTKQTVIVDDKLQDGTKEKLWVYEIEPFNFGSLTKIL
         LQLIK  EDG ILCL  G  LILYD KT+ T ++ D+     K+ +WVY+I+ FNF SL  IL
Subjt:  HLQLIKTIEDGKILCLAFGRDLILYDSKTKQTVIVDDKLQDGTKEKLWVYEIEPFNFGSLTKIL

TrEMBL top hitse value%identityAlignment
A0A0A0LCB8 F-box domain-containing protein3.0e-5246.21Show/hide
Query:  MTNECIELPPLDYSMEFYSCHLGYGFGFNPNKKQYKIVRLARVIPNGLFMANIFTFG--LSSSRGKWISSVPLLSFYAINGDNDGVYLNGHLYWNGYN-K
        +TNE +ELP  D   + +     +GFG++PNKKQYKIV+L+  I  GL++A+IFT G     S GKW S VP+L  + + G  DGVYLNG LYWNGYN  
Subjt:  MTNECIELPPLDYSMEFYSCHLGYGFGFNPNKKQYKIVRLARVIPNGLFMANIFTFG--LSSSRGKWISSVPLLSFYAINGDNDGVYLNGHLYWNGYN-K

Query:  IEDRDTVRNPILLRFNVEDEKFQEVSFPRSGDDGAFFPCSHIHVFNGTLYLSGFDFEG----GKFHVWKMARD--SWIK---EFVISLS-----SVSMVV
          D       +LLRF+VEDEKF+ VSFP   +D  F   S+I +FN TLYLS FDF      G+FHVWK+  +  SW K   EFVI        S   ++
Subjt:  IEDRDTVRNPILLRFNVEDEKFQEVSFPRSGDDGAFFPCSHIHVFNGTLYLSGFDFEG----GKFHVWKMARD--SWIK---EFVISLS-----SVSMVV

Query:  HCYIKY--YKG--------SKYHLQLIKTIEDGKILCLAFGRDLILYDSKTKQTVIVDDKLQDGTKEKLWVYEIE-PFNFGSLTKILGVN
        H YI+Y  Y+G        ++YH QLIK  ED K+L L   + LILYDSKT+Q  +  + L      KLW+Y+I+   N  SL K LGVN
Subjt:  HCYIKY--YKG--------SKYHLQLIKTIEDGKILCLAFGRDLILYDSKTKQTVIVDDKLQDGTKEKLWVYEIE-PFNFGSLTKILGVN

A0A0A0LCZ3 F-box domain-containing protein1.4e-4142.76Show/hide
Query:  MTNECIELPPLDYSMEFYSCHLGYGFGFNPNKKQYKIVRLARV-IPN-----------GLFMANIFTFG--LSSSRGKW----ISSVPLLSFYAINGDND
        MTNE +    L+ S++FY     +GFG++PNKKQYKIV+L+ + IP+             ++A IFT G       GKW    + +V +L  +       
Subjt:  MTNECIELPPLDYSMEFYSCHLGYGFGFNPNKKQYKIVRLARV-IPN-----------GLFMANIFTFG--LSSSRGKW----ISSVPLLSFYAINGDND

Query:  GVYLNGHLYWNGYNKIEDRDTVRNPILLRFNVEDEKFQEVSFPRSGDDGAFFPCSHIHVFNGTLYLSGFD--FEGGKFHVWKMARD--SWIK---EFVIS
        GVYLNG LYW  YN    R    N +LLRF+VEDEKF+ VSFP+   D AF   S+I +FN TLY+S FD   + G FHVWKM  +  SW+K   +F I 
Subjt:  GVYLNGHLYWNGYNKIEDRDTVRNPILLRFNVEDEKFQEVSFPRSGDDGAFFPCSHIHVFNGTLYLSGFD--FEGGKFHVWKMARD--SWIK---EFVIS

Query:  LS---SVSMVVHCYIKYYKGSKYHLQLIKTIEDGKILCLAFGRDLILYDSKTKQTVIVDDKLQDGTKEKLWVYEIEPFNFGSLTKILGVN
         S     S+++  YI+ Y   + H QLIK  ED  +L L   R LILYDSK  Q   V D+L      KL ++EI+  NF SL K LGVN
Subjt:  LS---SVSMVVHCYIKYYKGSKYHLQLIKTIEDGKILCLAFGRDLILYDSKTKQTVIVDDKLQDGTKEKLWVYEIEPFNFGSLTKILGVN

A0A6J1HBS1 F-box protein At3g07870-like9.2e-3337.55Show/hide
Query:  MTNECIELPPLDYSMEFYSCHLGYGFGFNPNKKQYKIVRLARVIPNGLFMAN----IFTFGLSSSRGKWIS-SVPLLSFYAINGDNDGVYLNGHLYWNGY
        MTNE  E+P  ++   + +C   YGFGF P  K YK++R + V      + N    IF FG   +R +W     P  SF+  +    GVYLNG L+W G 
Subjt:  MTNECIELPPLDYSMEFYSCHLGYGFGFNPNKKQYKIVRLARVIPNGLFMAN----IFTFGLSSSRGKWIS-SVPLLSFYAINGDNDGVYLNGHLYWNGY

Query:  NKIEDRDTVRNPILLRFNVEDEKFQEVSFPRSGDDGAFFPCSHIHVFNGTLYLSGFDFEGGKFHVWKMARD-SWIKEFVISLSSVSMVVHCYIKYYKGSK
        N +      R  ++ R N+EDEK++++ FP   DDG +FP  +I VFNG L+L+    E  ++ +WKM  D SWIK F + + + +++          SK
Subjt:  NKIEDRDTVRNPILLRFNVEDEKFQEVSFPRSGDDGAFFPCSHIHVFNGTLYLSGFDFEGGKFHVWKMARD-SWIKEFVISLSSVSMVVHCYIKYYKGSK

Query:  YHLQLIKTIEDGKILCLAFGRDLILYDSKTKQTVIVDDKLQDGT-KEKLWVYEIEPFNFGSLTKILGVN
          ++ IKT +DGKILCL  G  L+LYD KT++     +KL D T      V+ I+ FNF + + IL VN
Subjt:  YHLQLIKTIEDGKILCLAFGRDLILYDSKTKQTVIVDDKLQDGT-KEKLWVYEIEPFNFGSLTKILGVN

A0A6J1HBS8 F-box protein At3g07870-like1.6e-3238.26Show/hide
Query:  MTNECIELPPLDYSMEFYSCHLGYGFGFNPNKKQYKIVRLARVIPNGL---FMANIFTFGLSSSRGKWISSVPLLSFYAINGDNDGVYLNGHLYWNGYNK
        MTNE  ELP  ++   + +C   YGFGF P  K YK+VR + V        + + IF FG   +R +W         Y+ NG + GVYLNG L+W G   
Subjt:  MTNECIELPPLDYSMEFYSCHLGYGFGFNPNKKQYKIVRLARVIPNGL---FMANIFTFGLSSSRGKWISSVPLLSFYAINGDNDGVYLNGHLYWNGYNK

Query:  IEDRDTVRNPILLRFNVEDEKFQEVSFPRSGDDGAFFPCSHIHVFNGTLYLSGFDFEGGKFHVWKMARD-SWIKEFVISLSSVSMVVHCYIKYYKGSKYH
           +D + + ++ R N+EDEK++ + FP   DDG +FPC  I VFNG L+L+    EG ++ +WKM  D SWIK F  S+  V   +  +      S+  
Subjt:  IEDRDTVRNPILLRFNVEDEKFQEVSFPRSGDDGAFFPCSHIHVFNGTLYLSGFDFEGGKFHVWKMARD-SWIKEFVISLSSVSMVVHCYIKYYKGSKYH

Query:  LQLIKTIEDGKILCLAFGRDLILYDSKTKQTVIVDDKLQDGT-KEKLWVYEIEPFNFGSLTKIL
        L+ +K  +DGKILC+  G +L+LYD KT++     +KL D T   +  V+ I+ FNF +L  IL
Subjt:  LQLIKTIEDGKILCLAFGRDLILYDSKTKQTVIVDDKLQDGT-KEKLWVYEIEPFNFGSLTKIL

A0A6J1HDZ2 F-box protein At3g07870-like9.2e-3337.74Show/hide
Query:  MTNECIELPPLDYSMEFYSCHLGYGFGFNPNKKQYKIVRLARVIPNGLFMAN----IFTFGLSSSRGKWIS-SVPLLSFYAINGDNDGVYLNGHLYWNGY
        +TNE  ELP   +   +++C+  YGFGF P  KQYK+VR + V      + N    IF FG   +R +W     P  SF   NG + GVYLNG L+W G 
Subjt:  MTNECIELPPLDYSMEFYSCHLGYGFGFNPNKKQYKIVRLARVIPNGLFMAN----IFTFGLSSSRGKWIS-SVPLLSFYAINGDNDGVYLNGHLYWNGY

Query:  NKIEDRDTVRNPILLRFNVEDEKFQEVSFPRSGDDGAFFPCSHIHVFNGTLYLSGFDFEGGKFHVWKMARDS-WIKEFVISLSSVSMVVHCYIKYYKGSK
        N +         ++ R N+EDEK++++ FP   DD  +FPC  I +FNG ++L+    EG K+ VWKM  D  WIK F + +  V+  +  +      SK
Subjt:  NKIEDRDTVRNPILLRFNVEDEKFQEVSFPRSGDDGAFFPCSHIHVFNGTLYLSGFDFEGGKFHVWKMARDS-WIKEFVISLSSVSMVVHCYIKYYKGSK

Query:  YHLQLIKTIEDGKILCLAFGRDLILYDSKTKQTVIVDDKLQDGTKEKLWVYEIEPFNFGSLTKIL
          ++ IK  +DGKILCL  G +L+LY+  TK+   ++  + D T     V+ I+ FNF  L  IL
Subjt:  YHLQLIKTIEDGKILCLAFGRDLILYDSKTKQTVIVDDKLQDGTKEKLWVYEIEPFNFGSLTKIL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACGAATGAATGCATCGAACTTCCTCCACTTGACTATTCTATGGAGTTTTACTCGTGCCACCTCGGCTATGGATTTGGTTTTAACCCCAACAAAAAACAATAC
AAAATTGTTAGACTTGCAAGAGTTATACCTAATGGGTTATTTATGGCAAATATTTTCACATTTGGACTAAGTAGTAGTCGTGGTAAATGGATCAGTAGTGTTCCC
CTTTTGTCATTCTACGCTATTAATGGTGATAATGATGGTGTTTACTTGAATGGACATCTTTATTGGAATGGATACAATAAAATTGAGGATAGGGATACTGTTCGA
AATCCTATTCTTTTACGTTTTAATGTTGAAGATGAGAAATTTCAAGAAGTTTCTTTTCCCCGAAGTGGGGATGATGGAGCTTTTTTTCCTTGTTCTCATATTCAT
GTCTTTAATGGCACCCTCTATCTCTCAGGTTTCGACTTTGAAGGTGGTAAATTTCATGTCTGGAAGATGGCACGAGATTCATGGATTAAAGAATTTGTTATTTCA
TTGTCATCGGTTTCGATGGTGGTGCATTGCTACATAAAGTACTATAAAGGGAGTAAATATCACCTCCAACTCATCAAAACTATTGAAGATGGAAAGATCTTGTGT
CTTGCTTTCGGAAGGGATTTAATTTTGTACGACTCCAAGACCAAACAGACAGTGATAGTGGATGATAAACTACAAGATGGAACTAAGGAAAAGTTATGGGTTTAT
GAAATTGAGCCCTTCAATTTTGGCTCTCTAACAAAGATTTTGGGAGTAAATGATTGA
mRNA sequenceShow/hide mRNA sequence
ATGACGAATGAATGCATCGAACTTCCTCCACTTGACTATTCTATGGAGTTTTACTCGTGCCACCTCGGCTATGGATTTGGTTTTAACCCCAACAAAAAACAATAC
AAAATTGTTAGACTTGCAAGAGTTATACCTAATGGGTTATTTATGGCAAATATTTTCACATTTGGACTAAGTAGTAGTCGTGGTAAATGGATCAGTAGTGTTCCC
CTTTTGTCATTCTACGCTATTAATGGTGATAATGATGGTGTTTACTTGAATGGACATCTTTATTGGAATGGATACAATAAAATTGAGGATAGGGATACTGTTCGA
AATCCTATTCTTTTACGTTTTAATGTTGAAGATGAGAAATTTCAAGAAGTTTCTTTTCCCCGAAGTGGGGATGATGGAGCTTTTTTTCCTTGTTCTCATATTCAT
GTCTTTAATGGCACCCTCTATCTCTCAGGTTTCGACTTTGAAGGTGGTAAATTTCATGTCTGGAAGATGGCACGAGATTCATGGATTAAAGAATTTGTTATTTCA
TTGTCATCGGTTTCGATGGTGGTGCATTGCTACATAAAGTACTATAAAGGGAGTAAATATCACCTCCAACTCATCAAAACTATTGAAGATGGAAAGATCTTGTGT
CTTGCTTTCGGAAGGGATTTAATTTTGTACGACTCCAAGACCAAACAGACAGTGATAGTGGATGATAAACTACAAGATGGAACTAAGGAAAAGTTATGGGTTTAT
GAAATTGAGCCCTTCAATTTTGGCTCTCTAACAAAGATTTTGGGAGTAAATGATTGA
Protein sequenceShow/hide protein sequence
MTNECIELPPLDYSMEFYSCHLGYGFGFNPNKKQYKIVRLARVIPNGLFMANIFTFGLSSSRGKWISSVPLLSFYAINGDNDGVYLNGHLYWNGYNKIEDRDTVR
NPILLRFNVEDEKFQEVSFPRSGDDGAFFPCSHIHVFNGTLYLSGFDFEGGKFHVWKMARDSWIKEFVISLSSVSMVVHCYIKYYKGSKYHLQLIKTIEDGKILC
LAFGRDLILYDSKTKQTVIVDDKLQDGTKEKLWVYEIEPFNFGSLTKILGVND