; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CcUC10G200080 (gene) of Watermelon (PI 537277) v1 genome

Gene IDCcUC10G200080
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
Description4-coumarate--CoA ligase
Genome locationCicolChr10:26920582..26921301
RNA-Seq ExpressionCcUC10G200080
SyntenyCcUC10G200080
Gene Ontology termsGO:0016874 - ligase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0058290.1 4-coumarate--CoA ligase 1-like [Cucumis melo var. makuwa]1.1e-1669.44Show/hide
Query:  AGLHKLGIEKGDINMNFLHNSPWFVLAFLGACYLSVVATIANQFFLPTEIAKQAVSYGAKLIITHALFAEKV
        AGLHKLGI KGD+ M  L N+P FVLAFL A YL   AT+AN FF+P EIAKQAVS GAK+IIT + FAEKV
Subjt:  AGLHKLGIEKGDINMNFLHNSPWFVLAFLGACYLSVVATIANQFFLPTEIAKQAVSYGAKLIITHALFAEKV

KAG6587759.1 4-coumarate--CoA ligase 1, partial [Cucurbita argyrosperma subsp. sororia]1.1e-1646.1Show/hide
Query:  LIRIHIPVITLENPHSPSPPTSPYTQIASKIISEVEHHP----------YLPIKSRPTAKSTAHPTEWTAGLHKLGIEKGDINMNFLHNSPWFVLAFLGA
        + R  +P IT+       P   P      + IS+ +H P          Y   +   TA+  A      AGLHKLG+ KGD+ M  L NSP FVLAFLGA
Subjt:  LIRIHIPVITLENPHSPSPPTSPYTQIASKIISEVEHHP----------YLPIKSRPTAKSTAHPTEWTAGLHKLGIEKGDINMNFLHNSPWFVLAFLGA

Query:  CYLSVVATIANQFFLPTEIAKQAVSYGAKLIITHALFAEKV
         Y+  VAT+AN FF P EIAK A S GAKLIIT A FAEKV
Subjt:  CYLSVVATIANQFFLPTEIAKQAVSYGAKLIITHALFAEKV

XP_004146311.1 4-coumarate--CoA ligase 1 [Cucumis sativus]8.1e-1750Show/hide
Query:  PHSPSPPTSPYTQIASKIISEVEHHPYL------PIKSRPTAKSTAHPTEWTAGLHKLGIEKGDINMNFLHNSPWFVLAFLGACYLSVVATIANQFFLPT
        P  P     P      + ISE +H P L       I +    ++T+      AGLHKLGI KGD+ M  L N+P FVLAFLGA YL   AT+AN FF+ +
Subjt:  PHSPSPPTSPYTQIASKIISEVEHHPYL------PIKSRPTAKSTAHPTEWTAGLHKLGIEKGDINMNFLHNSPWFVLAFLGACYLSVVATIANQFFLPT

Query:  EIAKQAVSYGAKLIITHALFAEKV
        EIAKQAVS GAK+IIT A FAEKV
Subjt:  EIAKQAVSYGAKLIITHALFAEKV

XP_008453615.1 PREDICTED: 4-coumarate--CoA ligase 1-like [Cucumis melo]8.1e-1754.46Show/hide
Query:  IISEVEHHPYLPIKSRPTAKSTAHPTEWTAGLHKLGIEKGDINMNFLHNSPWFVLAFLGACYLSVVATIANQFFLPTEIAKQAVSYGAKLIITHALFAEK
        +I+    H Y   + + T++  A      AGLHKLGI KGD+ M  L N+P FVLAFL A YL   AT+AN FF+P EIAKQAVS GAK+IIT + FAEK
Subjt:  IISEVEHHPYLPIKSRPTAKSTAHPTEWTAGLHKLGIEKGDINMNFLHNSPWFVLAFLGACYLSVVATIANQFFLPTEIAKQAVSYGAKLIITHALFAEK

Query:  V
        V
Subjt:  V

XP_023531499.1 4-coumarate--CoA ligase 1-like isoform X2 [Cucurbita pepo subsp. pepo]1.8e-1645.39Show/hide
Query:  LIRIHIPVITLENPHSPSPPTSPYTQIASKIISEVEHHP----------YLPIKSRPTAKSTAHPTEWTAGLHKLGIEKGDINMNFLHNSPWFVLAFLGA
        + R  +P IT+       P   P      + IS+ +H P          Y   +   TA+  A      AGLHKLG+ KGD+ M  L NSP FVLAFLGA
Subjt:  LIRIHIPVITLENPHSPSPPTSPYTQIASKIISEVEHHP----------YLPIKSRPTAKSTAHPTEWTAGLHKLGIEKGDINMNFLHNSPWFVLAFLGA

Query:  CYLSVVATIANQFFLPTEIAKQAVSYGAKLIITHALFAEKV
         Y+  VAT+AN FF P EIAK   S GAKLIIT A+FAEKV
Subjt:  CYLSVVATIANQFFLPTEIAKQAVSYGAKLIITHALFAEKV

TrEMBL top hitse value%identityAlignment
A0A0A0LWT6 Uncharacterized protein3.9e-1750Show/hide
Query:  PHSPSPPTSPYTQIASKIISEVEHHPYL------PIKSRPTAKSTAHPTEWTAGLHKLGIEKGDINMNFLHNSPWFVLAFLGACYLSVVATIANQFFLPT
        P  P     P      + ISE +H P L       I +    ++T+      AGLHKLGI KGD+ M  L N+P FVLAFLGA YL   AT+AN FF+ +
Subjt:  PHSPSPPTSPYTQIASKIISEVEHHPYL------PIKSRPTAKSTAHPTEWTAGLHKLGIEKGDINMNFLHNSPWFVLAFLGACYLSVVATIANQFFLPT

Query:  EIAKQAVSYGAKLIITHALFAEKV
        EIAKQAVS GAK+IIT A FAEKV
Subjt:  EIAKQAVSYGAKLIITHALFAEKV

A0A1S3BWP0 4-coumarate--CoA ligase 1-like3.9e-1754.46Show/hide
Query:  IISEVEHHPYLPIKSRPTAKSTAHPTEWTAGLHKLGIEKGDINMNFLHNSPWFVLAFLGACYLSVVATIANQFFLPTEIAKQAVSYGAKLIITHALFAEK
        +I+    H Y   + + T++  A      AGLHKLGI KGD+ M  L N+P FVLAFL A YL   AT+AN FF+P EIAKQAVS GAK+IIT + FAEK
Subjt:  IISEVEHHPYLPIKSRPTAKSTAHPTEWTAGLHKLGIEKGDINMNFLHNSPWFVLAFLGACYLSVVATIANQFFLPTEIAKQAVSYGAKLIITHALFAEK

Query:  V
        V
Subjt:  V

A0A5A7UT30 4-coumarate--CoA ligase 1-like5.1e-1769.44Show/hide
Query:  AGLHKLGIEKGDINMNFLHNSPWFVLAFLGACYLSVVATIANQFFLPTEIAKQAVSYGAKLIITHALFAEKV
        AGLHKLGI KGD+ M  L N+P FVLAFL A YL   AT+AN FF+P EIAKQAVS GAK+IIT + FAEKV
Subjt:  AGLHKLGIEKGDINMNFLHNSPWFVLAFLGACYLSVVATIANQFFLPTEIAKQAVSYGAKLIITHALFAEKV

A0A5D3CN41 4-coumarate--CoA ligase 1-like3.9e-1754.46Show/hide
Query:  IISEVEHHPYLPIKSRPTAKSTAHPTEWTAGLHKLGIEKGDINMNFLHNSPWFVLAFLGACYLSVVATIANQFFLPTEIAKQAVSYGAKLIITHALFAEK
        +I+    H Y   + + T++  A      AGLHKLGI KGD+ M  L N+P FVLAFL A YL   AT+AN FF+P EIAKQAVS GAK+IIT + FAEK
Subjt:  IISEVEHHPYLPIKSRPTAKSTAHPTEWTAGLHKLGIEKGDINMNFLHNSPWFVLAFLGACYLSVVATIANQFFLPTEIAKQAVSYGAKLIITHALFAEK

Query:  V
        V
Subjt:  V

A0A6J1JJ94 4-coumarate--CoA ligase 1-like isoform X35.6e-1653.77Show/hide
Query:  ISEVEHHPYL------PIKSRPTAKSTAHPTEWTAGLHKLGIEKGDINMNFLHNSPWFVLAFLGACYLSVVATIANQFFLPTEIAKQAVSYGAKLIITHA
        ISE +H+P L       I +      TA      AGLHKLGI KGD+ M  L N+P F  AFLGA +   +AT+AN FF P EIAKQA S GAKLIIT A
Subjt:  ISEVEHHPYL------PIKSRPTAKSTAHPTEWTAGLHKLGIEKGDINMNFLHNSPWFVLAFLGACYLSVVATIANQFFLPTEIAKQAVSYGAKLIITHA

Query:  LFAEKV
         FAEKV
Subjt:  LFAEKV

SwissProt top hitse value%identityAlignment
I3PB37 4-coumarate:CoA ligase 16.6e-1444.55Show/hide
Query:  IISEVEHHPYLPIKSRPTAKSTAHPTEWTAGLHKLGIEKGDINMNFLHNSPWFVLAFLGACYLSVVATIANQFFLPTEIAKQAVSYGAKLIITHALFAEK
        +I+   +H Y       T++  A      AGL+KLGI++ D  M  L NSP FV AF+GA YL  ++T+AN  F P E+ KQA +  AKLIIT A F  K
Subjt:  IISEVEHHPYLPIKSRPTAKSTAHPTEWTAGLHKLGIEKGDINMNFLHNSPWFVLAFLGACYLSVVATIANQFFLPTEIAKQAVSYGAKLIITHALFAEK

Query:  V
        V
Subjt:  V

M4ISH0 4-coumarate--CoA ligase CCL14.3e-1352.78Show/hide
Query:  AGLHKLGIEKGDINMNFLHNSPWFVLAFLGACYLSVVATIANQFFLPTEIAKQAVSYGAKLIITHALFAEKV
        AGL KLGI++GD+ M  L NSP FV AFL A Y+  + T AN F+ P E+AKQA +   KL+IT A + +KV
Subjt:  AGLHKLGIEKGDINMNFLHNSPWFVLAFLGACYLSVVATIANQFFLPTEIAKQAVSYGAKLIITHALFAEKV

O24540 4-coumarate--CoA ligase5.6e-1352.78Show/hide
Query:  AGLHKLGIEKGDINMNFLHNSPWFVLAFLGACYLSVVATIANQFFLPTEIAKQAVSYGAKLIITHALFAEKV
        +GL KLGI++GD  M  L NSP FV AFLGA ++  ++T+AN FF  TE+ KQA +  AKLIIT   + +KV
Subjt:  AGLHKLGIEKGDINMNFLHNSPWFVLAFLGACYLSVVATIANQFFLPTEIAKQAVSYGAKLIITHALFAEKV

P31684 4-coumarate--CoA ligase 11.3e-1252.11Show/hide
Query:  GLHKLGIEKGDINMNFLHNSPWFVLAFLGACYLSVVATIANQFFLPTEIAKQAVSYGAKLIITHALFAEKV
        GL+KLGI++ D  M  L N P FV AF+GA YL  ++T+AN  F P E+ KQA +  AK++IT A FA KV
Subjt:  GLHKLGIEKGDINMNFLHNSPWFVLAFLGACYLSVVATIANQFFLPTEIAKQAVSYGAKLIITHALFAEKV

P31685 4-coumarate--CoA ligase 21.3e-1252.11Show/hide
Query:  GLHKLGIEKGDINMNFLHNSPWFVLAFLGACYLSVVATIANQFFLPTEIAKQAVSYGAKLIITHALFAEKV
        GL+KLGI++ D  M  L N P FV AF+GA YL  ++T+AN  F P E+ KQA +  AK++IT A FA KV
Subjt:  GLHKLGIEKGDINMNFLHNSPWFVLAFLGACYLSVVATIANQFFLPTEIAKQAVSYGAKLIITHALFAEKV

Arabidopsis top hitse value%identityAlignment
AT1G51680.1 4-coumarate:CoA ligase 14.4e-1350Show/hide
Query:  AGLHKLGIEKGDINMNFLHNSPWFVLAFLGACYLSVVATIANQFFLPTEIAKQAVSYGAKLIITHALFAEKV
        A  HKLG+ + D+ M  L N P FVL+FL A +    AT AN FF P EIAKQA +   KLIIT A + +K+
Subjt:  AGLHKLGIEKGDINMNFLHNSPWFVLAFLGACYLSVVATIANQFFLPTEIAKQAVSYGAKLIITHALFAEKV

AT1G51680.2 4-coumarate:CoA ligase 14.4e-1350Show/hide
Query:  AGLHKLGIEKGDINMNFLHNSPWFVLAFLGACYLSVVATIANQFFLPTEIAKQAVSYGAKLIITHALFAEKV
        A  HKLG+ + D+ M  L N P FVL+FL A +    AT AN FF P EIAKQA +   KLIIT A + +K+
Subjt:  AGLHKLGIEKGDINMNFLHNSPWFVLAFLGACYLSVVATIANQFFLPTEIAKQAVSYGAKLIITHALFAEKV

AT1G51680.3 4-coumarate:CoA ligase 14.4e-1350Show/hide
Query:  AGLHKLGIEKGDINMNFLHNSPWFVLAFLGACYLSVVATIANQFFLPTEIAKQAVSYGAKLIITHALFAEKV
        A  HKLG+ + D+ M  L N P FVL+FL A +    AT AN FF P EIAKQA +   KLIIT A + +K+
Subjt:  AGLHKLGIEKGDINMNFLHNSPWFVLAFLGACYLSVVATIANQFFLPTEIAKQAVSYGAKLIITHALFAEKV

AT1G65060.1 4-coumarate:CoA ligase 32.0e-1350Show/hide
Query:  AGLHKLGIEKGDINMNFLHNSPWFVLAFLGACYLSVVATIANQFFLPTEIAKQAVSYGAKLIITHALFAEKV
        +GL+KLGI KGD+ M  L NS  FV +F+GA  +  V+T AN F+   E+ KQ  S GAKLIITH+ + +K+
Subjt:  AGLHKLGIEKGDINMNFLHNSPWFVLAFLGACYLSVVATIANQFFLPTEIAKQAVSYGAKLIITHALFAEKV

AT1G65060.2 4-coumarate:CoA ligase 32.0e-1350Show/hide
Query:  AGLHKLGIEKGDINMNFLHNSPWFVLAFLGACYLSVVATIANQFFLPTEIAKQAVSYGAKLIITHALFAEKV
        +GL+KLGI KGD+ M  L NS  FV +F+GA  +  V+T AN F+   E+ KQ  S GAKLIITH+ + +K+
Subjt:  AGLHKLGIEKGDINMNFLHNSPWFVLAFLGACYLSVVATIANQFFLPTEIAKQAVSYGAKLIITHALFAEKV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCCCTCATCAGAATTCATATTCCGGTCATAACTCTTGAAAATCCCCATTCCCCATCCCCACCCACCTCCCCTTACACACAAATTGCTTCAAAAATAATCTCTGAAGT
CGAACACCATCCATATCTACCGATAAAATCTAGACCTACAGCGAAGTCCACAGCACATCCCACAGAATGGACCGCCGGCCTCCACAAATTAGGCATCGAAAAAGGTGACA
TCAACATGAACTTCCTCCATAACAGCCCATGGTTCGTTTTAGCCTTCCTCGGTGCCTGCTACTTGAGTGTCGTCGCCACCATAGCTAACCAATTCTTTCTGCCCACAGAA
ATTGCGAAACAAGCAGTGTCATATGGCGCCAAGCTGATAATAACCCATGCCCTGTTTGCAGAAAAAGTGGTCTGCACCGGATTTGTGGTTATGGTTGTCGTTAACCACTA
G
mRNA sequenceShow/hide mRNA sequence
ATGTCCCTCATCAGAATTCATATTCCGGTCATAACTCTTGAAAATCCCCATTCCCCATCCCCACCCACCTCCCCTTACACACAAATTGCTTCAAAAATAATCTCTGAAGT
CGAACACCATCCATATCTACCGATAAAATCTAGACCTACAGCGAAGTCCACAGCACATCCCACAGAATGGACCGCCGGCCTCCACAAATTAGGCATCGAAAAAGGTGACA
TCAACATGAACTTCCTCCATAACAGCCCATGGTTCGTTTTAGCCTTCCTCGGTGCCTGCTACTTGAGTGTCGTCGCCACCATAGCTAACCAATTCTTTCTGCCCACAGAA
ATTGCGAAACAAGCAGTGTCATATGGCGCCAAGCTGATAATAACCCATGCCCTGTTTGCAGAAAAAGTGGTCTGCACCGGATTTGTGGTTATGGTTGTCGTTAACCACTA
G
Protein sequenceShow/hide protein sequence
MSLIRIHIPVITLENPHSPSPPTSPYTQIASKIISEVEHHPYLPIKSRPTAKSTAHPTEWTAGLHKLGIEKGDINMNFLHNSPWFVLAFLGACYLSVVATIANQFFLPTE
IAKQAVSYGAKLIITHALFAEKVVCTGFVVMVVVNH