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CcUC10G200100 (gene) of Watermelon (PI 537277) v1 genome

Gene IDCcUC10G200100
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionUnknown protein
Genome locationCicolChr10:26924787..26925257
RNA-Seq ExpressionCcUC10G200100
SyntenyCcUC10G200100
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF3457566.1 hypothetical protein FNV43_RR02224 [Rhamnella rubrinervis]2.8e-0737.88Show/hide
Query:  VGDRISPRWRSAVCSEEH-PGPRLQLHEK-PIFPRFPLEGAVVCGGGQIRLDDLFSGGAENEWVVGGGEVLAEAALEADDMGFSGDEVHRPADVRGGAVA
        +GDR+ PRW   +  EE        LH   P     PL+G V     Q  L +L +G A+ + +VGGGE+L+  AL+AD    S   +  P +V GG V 
Subjt:  VGDRISPRWRSAVCSEEH-PGPRLQLHEK-PIFPRFPLEGAVVCGGGQIRLDDLFSGGAENEWVVGGGEVLAEAALEADDMGFSGDEVHRPADVRGGAVA

Query:  GLADGFFVVVGLEVLAQMALEANSFGAVEKLH
         L DG  VV   EVL  +ALE +    VE +H
Subjt:  GLADGFFVVVGLEVLAQMALEANSFGAVEKLH
KAF3457583.1 hypothetical protein FNV43_RR02241 [Rhamnella rubrinervis]3.3e-0837.12Show/hide
Query:  VGDRISPRWRSAVCSEEH-PGPRLQLHEK-PIFPRFPLEGAVVCGGGQIRLDDLFSGGAENEWVVGGGEVLAEAALEADDMGFSGDEVHRPADVRGGAVA
        +GDR+ PRW   +  EE      ++LH   P     PL+  V     Q  L DL +  A+ + +VGGGE+L+  AL+AD    SG  +  P +V GG + 
Subjt:  VGDRISPRWRSAVCSEEH-PGPRLQLHEK-PIFPRFPLEGAVVCGGGQIRLDDLFSGGAENEWVVGGGEVLAEAALEADDMGFSGDEVHRPADVRGGAVA

Query:  GLADGFFVVVGLEVLAQMALEANSFGAVEKLH
         L DG  VV   EVL  +ALE +    VE +H
Subjt:  GLADGFFVVVGLEVLAQMALEANSFGAVEKLH
KAF7819667.1 uncharacterized protein G2W53_025122 [Senna tora]3.5e-1038.17Show/hide
Query:  INNVHTPKYPLLRRRPAGDIVGDRISPRWRSAVCSEEHPGPRL-QLHEKPIFPRFPLEGAVVCGGGQIRLDDLFSGGAENEWVVGGGEVLA-EAALEADD
        ++  H PK+P+LRRR    I+   + PRWR  +  ++ P     Q HE P    FP    + C       D L S  A+ E +VGG EVLA   A +ADD
Subjt:  INNVHTPKYPLLRRRPAGDIVGDRISPRWRSAVCSEEHPGPRL-QLHEKPIFPRFPLEGAVVCGGGQIRLDDLFSGGAENEWVVGGGEVLA-EAALEADD

Query:  MGFSGDEVHRPADVRGGAVAGLADGFFVVVG
        +  +  ++HRPA++  G VA L+DGF +V G
Subjt:  MGFSGDEVHRPADVRGGAVAGLADGFFVVVG
TrEMBL top hitse value%identityAlignment
A0A453M4F8 Uncharacterized protein1.1e-0932.91Show/hide
Query:  INNVHTPKYPLLRRRPAGDIVGDRISPRWRSAVCSE-------EHPGPRLQLHEKPIFPRFPLEGAV-VCGGGQIRLDDLFSGGAENEWVVGGGEVLAEA
        ++++  P++P+L       +VGD ++P   + V +E       +  G  L+ H + +    PL+G V    G + RL  L +  A+ E + GGG+V A  
Subjt:  INNVHTPKYPLLRRRPAGDIVGDRISPRWRSAVCSE-------EHPGPRLQLHEKPIFPRFPLEGAV-VCGGGQIRLDDLFSGGAENEWVVGGGEVLAEA

Query:  ALEADDMGFSGDEVHRPADVRGGAVAGLADGFFVVVGLEVLAQMALEANSFGAVEKLH
        A EA   G     +HRPA  RGGAVA L D   V+V ++ L   AL+ +  G  E+LH
Subjt:  ALEADDMGFSGDEVHRPADVRGGAVAGLADGFFVVVGLEVLAQMALEANSFGAVEKLH
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAACCGCCGTGATATCAACAACGTCCACACACCAAAGTACCCACTGCTGCGTCGACGTCCGGCGGGGGATATCGTGGGTGACCGAATTTCTCCACGGTGGCGCTCCGC
CGTTTGCTCGGAGGAACATCCCGGCCCTCGTCTTCAACTTCACGAAAAACCCATCTTTCCTCGGTTCCCACTCGAGGGAGCCGTCGTGTGCGGCGGAGGCCAGATCCGTC
TGGACGACCTTTTTTCCGGCGGTGCCGAGAATGAATGGGTCGTCGGAGGCGGCGAGGTACTTGCCGAAGCAGCTCTTGAGGCGGATGACATGGGGTTTTCCGGCGACGAG
GTCCACCGTCCAGCGGACGTGAGGGGTGGCGCCGTTGCGGGTCTGGCGGACGGATTCTTTGTTGTCGTCGGCTTGGAGGTACTTGCCCAGATGGCTTTGGAGGCGAACAG
CTTTGGCGCTGTTGAAAAACTCCATGGATGA
mRNA sequenceShow/hide mRNA sequence
ATGAACCGCCGTGATATCAACAACGTCCACACACCAAAGTACCCACTGCTGCGTCGACGTCCGGCGGGGGATATCGTGGGTGACCGAATTTCTCCACGGTGGCGCTCCGC
CGTTTGCTCGGAGGAACATCCCGGCCCTCGTCTTCAACTTCACGAAAAACCCATCTTTCCTCGGTTCCCACTCGAGGGAGCCGTCGTGTGCGGCGGAGGCCAGATCCGTC
TGGACGACCTTTTTTCCGGCGGTGCCGAGAATGAATGGGTCGTCGGAGGCGGCGAGGTACTTGCCGAAGCAGCTCTTGAGGCGGATGACATGGGGTTTTCCGGCGACGAG
GTCCACCGTCCAGCGGACGTGAGGGGTGGCGCCGTTGCGGGTCTGGCGGACGGATTCTTTGTTGTCGTCGGCTTGGAGGTACTTGCCCAGATGGCTTTGGAGGCGAACAG
CTTTGGCGCTGTTGAAAAACTCCATGGATGA
Protein sequenceShow/hide protein sequence
MNRRDINNVHTPKYPLLRRRPAGDIVGDRISPRWRSAVCSEEHPGPRLQLHEKPIFPRFPLEGAVVCGGGQIRLDDLFSGGAENEWVVGGGEVLAEAALEADDMGFSGDE
VHRPADVRGGAVAGLADGFFVVVGLEVLAQMALEANSFGAVEKLHG