| GenBank top hits | e value | %identity | Alignment |
|---|
| XP_004136650.1 DNA-directed RNA polymerase V subunit 5A [Cucumis sativus] | 1.0e-35 | 96.25 | Show/hide |
Query: EITDLLVNITKHALKPNHQVLTEEEKQKLLKQYSIEEKQLPRMLRTDAIARYYGLEKGQVVKVTYDGDMTRSHVTYRCVW
+ITDLLVNITKHALKPNHQVLTEEEKQKLLKQYSIEEKQLPRMLRTDAIARYYGLEKGQVVKVTYDGDMTR+H+TYRCVW
Subjt: EITDLLVNITKHALKPNHQVLTEEEKQKLLKQYSIEEKQLPRMLRTDAIARYYGLEKGQVVKVTYDGDMTRSHVTYRCVW
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| XP_008443287.1 PREDICTED: DNA-directed RNA polymerase V subunit 5A [Cucumis melo] | 4.0e-35 | 96.25 | Show/hide |
Query: EITDLLVNITKHALKPNHQVLTEEEKQKLLKQYSIEEKQLPRMLRTDAIARYYGLEKGQVVKVTYDGDMTRSHVTYRCVW
+ITDLLVNITKHALKPNHQVLTEEEKQKLLKQYSIEEKQLPRMLRTDAIARYYGLEKGQVVKVTYDGDMT +HVTYRCVW
Subjt: EITDLLVNITKHALKPNHQVLTEEEKQKLLKQYSIEEKQLPRMLRTDAIARYYGLEKGQVVKVTYDGDMTRSHVTYRCVW
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| XP_022158561.1 DNA-directed RNA polymerase V subunit 5A [Momordica charantia] | 1.8e-35 | 97.5 | Show/hide |
Query: EITDLLVNITKHALKPNHQVLTEEEKQKLLKQYSIEEKQLPRMLRTDAIARYYGLEKGQVVKVTYDGDMTRSHVTYRCVW
+ITDLLVNITKHALKPNHQVLTEEEKQKLLKQYSIEEKQLPRMLRTDAIARYYGLEKGQVVKVTYDGDMT SHVTYRCVW
Subjt: EITDLLVNITKHALKPNHQVLTEEEKQKLLKQYSIEEKQLPRMLRTDAIARYYGLEKGQVVKVTYDGDMTRSHVTYRCVW
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| XP_022950955.1 DNA-directed RNA polymerase V subunit 5A isoform X2 [Cucurbita moschata] | 1.4e-35 | 96.25 | Show/hide |
Query: EITDLLVNITKHALKPNHQVLTEEEKQKLLKQYSIEEKQLPRMLRTDAIARYYGLEKGQVVKVTYDGDMTRSHVTYRCVW
+ITDLLVNITKHALKPNHQVLTEEEKQKLL+QYSIEEKQLPRMLRTDAIARYYGLEKGQ+VKVTYDGDMTRSHVTYRCVW
Subjt: EITDLLVNITKHALKPNHQVLTEEEKQKLLKQYSIEEKQLPRMLRTDAIARYYGLEKGQVVKVTYDGDMTRSHVTYRCVW
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| XP_023539155.1 DNA-directed RNA polymerase V subunit 5A [Cucurbita pepo subsp. pepo] | 1.4e-35 | 96.25 | Show/hide |
Query: EITDLLVNITKHALKPNHQVLTEEEKQKLLKQYSIEEKQLPRMLRTDAIARYYGLEKGQVVKVTYDGDMTRSHVTYRCVW
+ITDLLVNITKHALKPNHQVLTEEEKQKLL+QYSIEEKQLPRMLRTDAIARYYGLEKGQ+VKVTYDGDMTRSHVTYRCVW
Subjt: EITDLLVNITKHALKPNHQVLTEEEKQKLLKQYSIEEKQLPRMLRTDAIARYYGLEKGQVVKVTYDGDMTRSHVTYRCVW
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A0A0LCG9 Uncharacterized protein | 5.1e-36 | 96.25 | Show/hide |
Query: EITDLLVNITKHALKPNHQVLTEEEKQKLLKQYSIEEKQLPRMLRTDAIARYYGLEKGQVVKVTYDGDMTRSHVTYRCVW
+ITDLLVNITKHALKPNHQVLTEEEKQKLLKQYSIEEKQLPRMLRTDAIARYYGLEKGQVVKVTYDGDMTR+H+TYRCVW
Subjt: EITDLLVNITKHALKPNHQVLTEEEKQKLLKQYSIEEKQLPRMLRTDAIARYYGLEKGQVVKVTYDGDMTRSHVTYRCVW
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| A0A1S3B7M5 DNA-directed RNA polymerase V subunit 5A | 1.9e-35 | 96.25 | Show/hide |
Query: EITDLLVNITKHALKPNHQVLTEEEKQKLLKQYSIEEKQLPRMLRTDAIARYYGLEKGQVVKVTYDGDMTRSHVTYRCVW
+ITDLLVNITKHALKPNHQVLTEEEKQKLLKQYSIEEKQLPRMLRTDAIARYYGLEKGQVVKVTYDGDMT +HVTYRCVW
Subjt: EITDLLVNITKHALKPNHQVLTEEEKQKLLKQYSIEEKQLPRMLRTDAIARYYGLEKGQVVKVTYDGDMTRSHVTYRCVW
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| A0A6J1E191 DNA-directed RNA polymerase V subunit 5A | 8.6e-36 | 97.5 | Show/hide |
Query: EITDLLVNITKHALKPNHQVLTEEEKQKLLKQYSIEEKQLPRMLRTDAIARYYGLEKGQVVKVTYDGDMTRSHVTYRCVW
+ITDLLVNITKHALKPNHQVLTEEEKQKLLKQYSIEEKQLPRMLRTDAIARYYGLEKGQVVKVTYDGDMT SHVTYRCVW
Subjt: EITDLLVNITKHALKPNHQVLTEEEKQKLLKQYSIEEKQLPRMLRTDAIARYYGLEKGQVVKVTYDGDMTRSHVTYRCVW
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| A0A6J1GH86 DNA-directed RNA polymerase V subunit 5A isoform X2 | 6.6e-36 | 96.25 | Show/hide |
Query: EITDLLVNITKHALKPNHQVLTEEEKQKLLKQYSIEEKQLPRMLRTDAIARYYGLEKGQVVKVTYDGDMTRSHVTYRCVW
+ITDLLVNITKHALKPNHQVLTEEEKQKLL+QYSIEEKQLPRMLRTDAIARYYGLEKGQ+VKVTYDGDMTRSHVTYRCVW
Subjt: EITDLLVNITKHALKPNHQVLTEEEKQKLLKQYSIEEKQLPRMLRTDAIARYYGLEKGQVVKVTYDGDMTRSHVTYRCVW
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| A0A6J1I733 DNA-directed RNA polymerase V subunit 5A isoform X2 | 5.6e-35 | 95 | Show/hide |
Query: EITDLLVNITKHALKPNHQVLTEEEKQKLLKQYSIEEKQLPRMLRTDAIARYYGLEKGQVVKVTYDGDMTRSHVTYRCVW
+ITDLLVNITKHALKPNHQVLTEEEKQKLL+QYSIEEKQLPRMLRTDAIARYY LEKGQ+VKVTYDGDMTRSHVTYRCVW
Subjt: EITDLLVNITKHALKPNHQVLTEEEKQKLLKQYSIEEKQLPRMLRTDAIARYYGLEKGQVVKVTYDGDMTRSHVTYRCVW
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| O81098 DNA-directed RNA polymerases II and IV subunit 5A | 7.3e-16 | 53.95 | Show/hide |
Query: DLLVNITKHALKPNHQVLTEEEKQKLLKQYSIEEKQLPRMLRTDAIARYYGLEKGQVVKVTYDGDMTRSHVTYRCV
++LVNI +H L P HQVLT EEK+ LL++Y+++E QLPR+ TD IARY+GL++GQVVK+ + +VTYR V
Subjt: DLLVNITKHALKPNHQVLTEEEKQKLLKQYSIEEKQLPRMLRTDAIARYYGLEKGQVVKVTYDGDMTRSHVTYRCV
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| Q54EH2 DNA-directed RNA polymerases I, II, and III subunit rpabc1 | 2.4e-14 | 41.8 | Show/hide |
Query: MVDLQAGPAKFLFCIVDKNGGQSAKFKRKWKKKESEIT-------DLLVNITKHALKPNHQVLTEEEKQKLLKQYSIEEKQLPRMLRTDAIARYYGLEKG
M D QA A +V +N AK +E +IT +LLVNIT H L P H +LT+EEK +LL +Y ++E QLPR+ D +ARYYGL +G
Subjt: MVDLQAGPAKFLFCIVDKNGGQSAKFKRKWKKKESEIT-------DLLVNITKHALKPNHQVLTEEEKQKLLKQYSIEEKQLPRMLRTDAIARYYGLEKG
Query: QVVKVTYDGDMTRSHVTYR-CV
VVK+ + ++TYR CV
Subjt: QVVKVTYDGDMTRSHVTYR-CV
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| Q9M1H8 DNA-directed RNA polymerase V subunit 5C | 8.6e-17 | 51.28 | Show/hide |
Query: ITDLLVNITKHALKPNHQVLTEEEKQKLLKQYSIEEKQLPRMLRTDAIARYYGLEKGQVVKVTYDGDMTRSHVTYRCV
I DLLVNITKH +P ++L +EEK++LL+++++E+KQLP + D+ RYYGL+K QVVK+TY + VTYRC+
Subjt: ITDLLVNITKHALKPNHQVLTEEEKQKLLKQYSIEEKQLPRMLRTDAIARYYGLEKGQVVKVTYDGDMTRSHVTYRCV
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| Q9M1J2 DNA-directed RNA polymerase V subunit 5A | 3.7e-28 | 73.75 | Show/hide |
Query: EITDLLVNITKHALKPNHQVLTEEEKQKLLKQYSIEEKQLPRMLRTDAIARYYGLEKGQVVKVTYDGDMTRSHVTYRCVW
+ITDLLVNITKH+LKP HQVL +EEK LLK++SIEEKQLPR+ + DAI RYYGLEKGQVVKV Y G++T SHV +RCVW
Subjt: EITDLLVNITKHALKPNHQVLTEEEKQKLLKQYSIEEKQLPRMLRTDAIARYYGLEKGQVVKVTYDGDMTRSHVTYRCVW
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| Q9ZVB9 DNA-directed RNA polymerases IV and V subunit 5B | 8.6e-25 | 67.09 | Show/hide |
Query: EITDLLVNITKHALKPNHQVLTEEEKQKLLKQYSIEEKQLPRMLRTDAIARYYGLEKGQVVKVTYDGDMTRSHVTYRCV
EITDLLVN++KH L+P HQVL ++EK+ LLK++SIEEKQLPR+ D I RYYGLE GQV+KVTY +++ SHVTYRCV
Subjt: EITDLLVNITKHALKPNHQVLTEEEKQKLLKQYSIEEKQLPRMLRTDAIARYYGLEKGQVVKVTYDGDMTRSHVTYRCV
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| Arabidopsis top hits | e value | %identity | Alignment |
|---|
| AT2G41340.1 RNA polymerase II fifth largest subunit, D | 6.1e-26 | 67.09 | Show/hide |
Query: EITDLLVNITKHALKPNHQVLTEEEKQKLLKQYSIEEKQLPRMLRTDAIARYYGLEKGQVVKVTYDGDMTRSHVTYRCV
EITDLLVN++KH L+P HQVL ++EK+ LLK++SIEEKQLPR+ D I RYYGLE GQV+KVTY +++ SHVTYRCV
Subjt: EITDLLVNITKHALKPNHQVLTEEEKQKLLKQYSIEEKQLPRMLRTDAIARYYGLEKGQVVKVTYDGDMTRSHVTYRCV
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| AT3G22320.1 Eukaryotic rpb5 RNA polymerase subunit family protein | 5.2e-17 | 53.95 | Show/hide |
Query: DLLVNITKHALKPNHQVLTEEEKQKLLKQYSIEEKQLPRMLRTDAIARYYGLEKGQVVKVTYDGDMTRSHVTYRCV
++LVNI +H L P HQVLT EEK+ LL++Y+++E QLPR+ TD IARY+GL++GQVVK+ + +VTYR V
Subjt: DLLVNITKHALKPNHQVLTEEEKQKLLKQYSIEEKQLPRMLRTDAIARYYGLEKGQVVKVTYDGDMTRSHVTYRCV
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| AT3G54490.1 RNA polymerase II fifth largest subunit, E | 6.1e-18 | 51.28 | Show/hide |
Query: ITDLLVNITKHALKPNHQVLTEEEKQKLLKQYSIEEKQLPRMLRTDAIARYYGLEKGQVVKVTYDGDMTRSHVTYRCV
I DLLVNITKH +P ++L +EEK++LL+++++E+KQLP + D+ RYYGL+K QVVK+TY + VTYRC+
Subjt: ITDLLVNITKHALKPNHQVLTEEEKQKLLKQYSIEEKQLPRMLRTDAIARYYGLEKGQVVKVTYDGDMTRSHVTYRCV
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| AT3G57080.1 Eukaryotic rpb5 RNA polymerase subunit family protein | 2.7e-29 | 73.75 | Show/hide |
Query: EITDLLVNITKHALKPNHQVLTEEEKQKLLKQYSIEEKQLPRMLRTDAIARYYGLEKGQVVKVTYDGDMTRSHVTYRCVW
+ITDLLVNITKH+LKP HQVL +EEK LLK++SIEEKQLPR+ + DAI RYYGLEKGQVVKV Y G++T SHV +RCVW
Subjt: EITDLLVNITKHALKPNHQVLTEEEKQKLLKQYSIEEKQLPRMLRTDAIARYYGLEKGQVVKVTYDGDMTRSHVTYRCVW
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| AT5G57980.1 RNA polymerase II fifth largest subunit, C | 2.0e-13 | 45.45 | Show/hide |
Query: EITDLLVNITKHALKPNHQVLTEEEKQKLLKQYSIEEKQLPRMLRTDAIARYYGLEKGQVVKVTYDGDMTRSHVTYR
E +L+ NIT+H L + VL ++ K+KLL Y++++ QLPR+L TD +ARYYGL++GQVVK+ + + TYR
Subjt: EITDLLVNITKHALKPNHQVLTEEEKQKLLKQYSIEEKQLPRMLRTDAIARYYGLEKGQVVKVTYDGDMTRSHVTYR
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