| GenBank top hits | e value | %identity | Alignment |
|---|
| KAA0053863.1 DNA-directed RNA polymerase V subunit 5A [Cucumis melo var. makuwa] | 8.0e-69 | 89.86 | Show/hide |
Query: MEEDGFEGEPNQVEFGTCLSSYIDNGTTESHRYFLSRRTVLEMLRDRGYTLNSPDIDLSLQHFREIYGQSPDVDRLKISAVHRSDPSKRVLVIFCGTGAV
MEEDGFE EPN VEFGTCLSSYID+GTTESHRYFLSRRTV+EML+DRGYT+NSPDIDLSLQ FR+I+GQ PDVDRLK+ A H SDPSKRVLV+FCGTGAV
Subjt: MEEDGFEGEPNQVEFGTCLSSYIDNGTTESHRYFLSRRTVLEMLRDRGYTLNSPDIDLSLQHFREIYGQSPDVDRLKISAVHRSDPSKRVLVIFCGTGAV
Query: KVNAIRNIAGQIANKDSLHGLILIVQNQITNQAMKAVELFSFKVEIFQ
KVNAIRNIAGQIANKDSLHGLILIVQNQITNQAMKAVELFSFKVEIFQ
Subjt: KVNAIRNIAGQIANKDSLHGLILIVQNQITNQAMKAVELFSFKVEIFQ
|
|
| XP_004136650.1 DNA-directed RNA polymerase V subunit 5A [Cucumis sativus] | 3.0e-68 | 89.19 | Show/hide |
Query: MEEDGFEGEPNQVEFGTCLSSYIDNGTTESHRYFLSRRTVLEMLRDRGYTLNSPDIDLSLQHFREIYGQSPDVDRLKISAVHRSDPSKRVLVIFCGTGAV
MEEDGFE EPN VEFGTCLSSYID+GTTESHRYFLSRRTV+EML+DRGYT+NSP+ID SLQ FRE +GQ PDVDRLK+SA H SDPSKRVLV+FCGTGAV
Subjt: MEEDGFEGEPNQVEFGTCLSSYIDNGTTESHRYFLSRRTVLEMLRDRGYTLNSPDIDLSLQHFREIYGQSPDVDRLKISAVHRSDPSKRVLVIFCGTGAV
Query: KVNAIRNIAGQIANKDSLHGLILIVQNQITNQAMKAVELFSFKVEIFQ
KVNAIRNIAGQIANKDSLHGLILIVQNQITNQAMKAVELFSFKVEIFQ
Subjt: KVNAIRNIAGQIANKDSLHGLILIVQNQITNQAMKAVELFSFKVEIFQ
|
|
| XP_008443287.1 PREDICTED: DNA-directed RNA polymerase V subunit 5A [Cucumis melo] | 8.0e-69 | 89.86 | Show/hide |
Query: MEEDGFEGEPNQVEFGTCLSSYIDNGTTESHRYFLSRRTVLEMLRDRGYTLNSPDIDLSLQHFREIYGQSPDVDRLKISAVHRSDPSKRVLVIFCGTGAV
MEEDGFE EPN VEFGTCLSSYID+GTTESHRYFLSRRTV+EML+DRGYT+NSPDIDLSLQ FR+I+GQ PDVDRLK+ A H SDPSKRVLV+FCGTGAV
Subjt: MEEDGFEGEPNQVEFGTCLSSYIDNGTTESHRYFLSRRTVLEMLRDRGYTLNSPDIDLSLQHFREIYGQSPDVDRLKISAVHRSDPSKRVLVIFCGTGAV
Query: KVNAIRNIAGQIANKDSLHGLILIVQNQITNQAMKAVELFSFKVEIFQ
KVNAIRNIAGQIANKDSLHGLILIVQNQITNQAMKAVELFSFKVEIFQ
Subjt: KVNAIRNIAGQIANKDSLHGLILIVQNQITNQAMKAVELFSFKVEIFQ
|
|
| XP_022158561.1 DNA-directed RNA polymerase V subunit 5A [Momordica charantia] | 1.5e-67 | 88.51 | Show/hide |
Query: MEEDGFEGEPNQVEFGTCLSSYIDNGTTESHRYFLSRRTVLEMLRDRGYTLNSPDIDLSLQHFREIYGQSPDVDRLKISAVHRSDPSKRVLVIFCGTGAV
MEEDGFEGEPN+VE GTCLSSYIDNG+TESHRYFL RRTVLEMLRDRGYT + D DL+LQ FREIYGQSPDVDRLK+SAVHRSDPSKR+LVIFCGTG+V
Subjt: MEEDGFEGEPNQVEFGTCLSSYIDNGTTESHRYFLSRRTVLEMLRDRGYTLNSPDIDLSLQHFREIYGQSPDVDRLKISAVHRSDPSKRVLVIFCGTGAV
Query: KVNAIRNIAGQIANKDSLHGLILIVQNQITNQAMKAVELFSFKVEIFQ
KVNAIRNIAGQI NKD+LHGLILIVQNQITNQAMKAV+LFSFKVEIFQ
Subjt: KVNAIRNIAGQIANKDSLHGLILIVQNQITNQAMKAVELFSFKVEIFQ
|
|
| XP_038903402.1 DNA-directed RNA polymerase V subunit 5A [Benincasa hispida] | 8.3e-74 | 97.3 | Show/hide |
Query: MEEDGFEGEPNQVEFGTCLSSYIDNGTTESHRYFLSRRTVLEMLRDRGYTLNSPDIDLSLQHFREIYGQSPDVDRLKISAVHRSDPSKRVLVIFCGTGAV
MEEDGFEGEPN+VEFGTCLSSYIDNGTTESHRYFLSRRTVLEMLRDRGYTLNS DIDLSLQ FREIYGQSPDVDRLK+SAVHRSDPSKRVLVIFCGTGAV
Subjt: MEEDGFEGEPNQVEFGTCLSSYIDNGTTESHRYFLSRRTVLEMLRDRGYTLNSPDIDLSLQHFREIYGQSPDVDRLKISAVHRSDPSKRVLVIFCGTGAV
Query: KVNAIRNIAGQIANKDSLHGLILIVQNQITNQAMKAVELFSFKVEIFQ
KVNAIRNIAGQIANKDSLHGLILIVQNQITNQAMKAVELFSFKVEIFQ
Subjt: KVNAIRNIAGQIANKDSLHGLILIVQNQITNQAMKAVELFSFKVEIFQ
|
|
| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A0A0LCG9 Uncharacterized protein | 1.5e-68 | 89.19 | Show/hide |
Query: MEEDGFEGEPNQVEFGTCLSSYIDNGTTESHRYFLSRRTVLEMLRDRGYTLNSPDIDLSLQHFREIYGQSPDVDRLKISAVHRSDPSKRVLVIFCGTGAV
MEEDGFE EPN VEFGTCLSSYID+GTTESHRYFLSRRTV+EML+DRGYT+NSP+ID SLQ FRE +GQ PDVDRLK+SA H SDPSKRVLV+FCGTGAV
Subjt: MEEDGFEGEPNQVEFGTCLSSYIDNGTTESHRYFLSRRTVLEMLRDRGYTLNSPDIDLSLQHFREIYGQSPDVDRLKISAVHRSDPSKRVLVIFCGTGAV
Query: KVNAIRNIAGQIANKDSLHGLILIVQNQITNQAMKAVELFSFKVEIFQ
KVNAIRNIAGQIANKDSLHGLILIVQNQITNQAMKAVELFSFKVEIFQ
Subjt: KVNAIRNIAGQIANKDSLHGLILIVQNQITNQAMKAVELFSFKVEIFQ
|
|
| A0A1S3B7M5 DNA-directed RNA polymerase V subunit 5A | 3.9e-69 | 89.86 | Show/hide |
Query: MEEDGFEGEPNQVEFGTCLSSYIDNGTTESHRYFLSRRTVLEMLRDRGYTLNSPDIDLSLQHFREIYGQSPDVDRLKISAVHRSDPSKRVLVIFCGTGAV
MEEDGFE EPN VEFGTCLSSYID+GTTESHRYFLSRRTV+EML+DRGYT+NSPDIDLSLQ FR+I+GQ PDVDRLK+ A H SDPSKRVLV+FCGTGAV
Subjt: MEEDGFEGEPNQVEFGTCLSSYIDNGTTESHRYFLSRRTVLEMLRDRGYTLNSPDIDLSLQHFREIYGQSPDVDRLKISAVHRSDPSKRVLVIFCGTGAV
Query: KVNAIRNIAGQIANKDSLHGLILIVQNQITNQAMKAVELFSFKVEIFQ
KVNAIRNIAGQIANKDSLHGLILIVQNQITNQAMKAVELFSFKVEIFQ
Subjt: KVNAIRNIAGQIANKDSLHGLILIVQNQITNQAMKAVELFSFKVEIFQ
|
|
| A0A5D3DQJ3 DNA-directed RNA polymerase V subunit 5A | 3.9e-69 | 89.86 | Show/hide |
Query: MEEDGFEGEPNQVEFGTCLSSYIDNGTTESHRYFLSRRTVLEMLRDRGYTLNSPDIDLSLQHFREIYGQSPDVDRLKISAVHRSDPSKRVLVIFCGTGAV
MEEDGFE EPN VEFGTCLSSYID+GTTESHRYFLSRRTV+EML+DRGYT+NSPDIDLSLQ FR+I+GQ PDVDRLK+ A H SDPSKRVLV+FCGTGAV
Subjt: MEEDGFEGEPNQVEFGTCLSSYIDNGTTESHRYFLSRRTVLEMLRDRGYTLNSPDIDLSLQHFREIYGQSPDVDRLKISAVHRSDPSKRVLVIFCGTGAV
Query: KVNAIRNIAGQIANKDSLHGLILIVQNQITNQAMKAVELFSFKVEIFQ
KVNAIRNIAGQIANKDSLHGLILIVQNQITNQAMKAVELFSFKVEIFQ
Subjt: KVNAIRNIAGQIANKDSLHGLILIVQNQITNQAMKAVELFSFKVEIFQ
|
|
| A0A6J1E191 DNA-directed RNA polymerase V subunit 5A | 7.3e-68 | 88.51 | Show/hide |
Query: MEEDGFEGEPNQVEFGTCLSSYIDNGTTESHRYFLSRRTVLEMLRDRGYTLNSPDIDLSLQHFREIYGQSPDVDRLKISAVHRSDPSKRVLVIFCGTGAV
MEEDGFEGEPN+VE GTCLSSYIDNG+TESHRYFL RRTVLEMLRDRGYT + D DL+LQ FREIYGQSPDVDRLK+SAVHRSDPSKR+LVIFCGTG+V
Subjt: MEEDGFEGEPNQVEFGTCLSSYIDNGTTESHRYFLSRRTVLEMLRDRGYTLNSPDIDLSLQHFREIYGQSPDVDRLKISAVHRSDPSKRVLVIFCGTGAV
Query: KVNAIRNIAGQIANKDSLHGLILIVQNQITNQAMKAVELFSFKVEIFQ
KVNAIRNIAGQI NKD+LHGLILIVQNQITNQAMKAV+LFSFKVEIFQ
Subjt: KVNAIRNIAGQIANKDSLHGLILIVQNQITNQAMKAVELFSFKVEIFQ
|
|
| A0A6J1I733 DNA-directed RNA polymerase V subunit 5A isoform X2 | 1.8e-66 | 86.49 | Show/hide |
Query: MEEDGFEGEPNQVEFGTCLSSYIDNGTTESHRYFLSRRTVLEMLRDRGYTLNSPDIDLSLQHFREIYGQSPDVDRLKISAVHRSDPSKRVLVIFCGTGAV
MEEDGF GEPN+VE GTCLSSYID+GTTESHRY+LSRRTVLEMLRDRGYT+N DIDL+LQ FREIYGQ PDVDRLK+SA HR+DPSKR+LVIFCGTGAV
Subjt: MEEDGFEGEPNQVEFGTCLSSYIDNGTTESHRYFLSRRTVLEMLRDRGYTLNSPDIDLSLQHFREIYGQSPDVDRLKISAVHRSDPSKRVLVIFCGTGAV
Query: KVNAIRNIAGQIANKDSLHGLILIVQNQITNQAMKAVELFSFKVEIFQ
KV+AIRNIAGQI NK++LHGLILIVQNQITNQAMKAVE+FSFKVEIFQ
Subjt: KVNAIRNIAGQIANKDSLHGLILIVQNQITNQAMKAVELFSFKVEIFQ
|
|
| SwissProt top hits | e value | %identity | Alignment |
|---|
| A8XGH1 DNA-directed RNA polymerases I, II, and III subunit RPABC1 | 8.2e-08 | 26.72 | Show/hide |
Query: ESHRYFLSRRTVLEMLRDRGYTLNSPDIDLSLQHFREIYGQSPDVDR-----LKISAVHRSDPSKRVLVIFCGTGAVKVNAIRNIAGQIANKDSLHGLIL
E++R + R+TVL+M+ DRGY + ++D L+ F+E +G P + L I H DP+ ++ V F + + I+ I Q+ + ++ I+
Subjt: ESHRYFLSRRTVLEMLRDRGYTLNSPDIDLSLQHFREIYGQSPDVDR-----LKISAVHRSDPSKRVLVIFCGTGAVKVNAIRNIAGQIANKDSLHGLIL
Query: IVQNQITNQAMKAVELFSFKVEIFQFLHTSV
+VQ +T A +++ + K + FL +
Subjt: IVQNQITNQAMKAVELFSFKVEIFQFLHTSV
|
|
| Q9M1H8 DNA-directed RNA polymerase V subunit 5C | 4.6e-27 | 41.5 | Show/hide |
Query: EEDGFEGEPNQVEFGT-CLSSYIDNGTTESHRYFLSRRTVLEMLRDRGYTLNSPDIDLSLQHFREIYGQSPDVDRLKISAVHRSDPSKRVLVIFCGTGAV
EE E + + GT C+S D G ES R++L+R T EMLRDRGY +N ++ L+L FR ++G+ P+++RL+I RSDP K++LV+F GT +
Subjt: EEDGFEGEPNQVEFGT-CLSSYIDNGTTESHRYFLSRRTVLEMLRDRGYTLNSPDIDLSLQHFREIYGQSPDVDRLKISAVHRSDPSKRVLVIFCGTGAV
Query: KVNAIRNIAGQIANKDSLHGLILIVQNQITNQAMKAVELFSFKVEIF
V ++R + QI+N LH +IL++Q+++ + A KA+ F F VE F
Subjt: KVNAIRNIAGQIANKDSLHGLILIVQNQITNQAMKAVELFSFKVEIF
|
|
| Q9M1J2 DNA-directed RNA polymerase V subunit 5A | 6.6e-42 | 60.31 | Show/hide |
Query: CLSSYIDNGTTESHRYFLSRRTVLEMLRDRGYTLNSPDIDLSLQHFREIYGQSPDVDRLKISAVHRSDPSKRVLVIFCGTGAVKVNAIRNIAGQIANKDS
CLS Y+D + ESHRY+L+RR L+MLRDRGY ++ DI+LSL FR +YG+ PDVDRL+ISA+HRSD +K+V ++F GT VKVNAIR++ I ++++
Subjt: CLSSYIDNGTTESHRYFLSRRTVLEMLRDRGYTLNSPDIDLSLQHFREIYGQSPDVDRLKISAVHRSDPSKRVLVIFCGTGAVKVNAIRNIAGQIANKDS
Query: LHGLILIVQNQITNQAMKAVELFSFKVEIFQ
+ GLIL++QN +TNQA+KA+ELFSFKVEIFQ
Subjt: LHGLILIVQNQITNQAMKAVELFSFKVEIFQ
|
|
| Q9N5K2 DNA-directed RNA polymerases I, II, and III subunit RPABC1 | 1.8e-07 | 26.72 | Show/hide |
Query: ESHRYFLSRRTVLEMLRDRGYTLNSPDIDLSLQHFREIYGQSPDVDR-----LKISAVHRSDPSKRVLVIFCGTGAVKVNAIRNIAGQIANKDSLHGLIL
E++R + R+TVL+M+ DRGY + ++D L+ F+ YG P + L I H DP+ ++ V F + + I+ I Q+ + ++ I+
Subjt: ESHRYFLSRRTVLEMLRDRGYTLNSPDIDLSLQHFREIYGQSPDVDR-----LKISAVHRSDPSKRVLVIFCGTGAVKVNAIRNIAGQIANKDSLHGLIL
Query: IVQNQITNQAMKAVELFSFKVEIFQFLHTSV
+VQ +T A +++ + K + FL +
Subjt: IVQNQITNQAMKAVELFSFKVEIFQFLHTSV
|
|
| Q9ZVB9 DNA-directed RNA polymerases IV and V subunit 5B | 4.0e-39 | 54.93 | Show/hide |
Query: EGEPNQVEFGTCLSSYIDNGTTESHRYFLSRRTVLEMLRDRGYTLNSPDIDLSLQHFREIYGQSPDVDRLKISAVHRSDPSKRVLVIFCGTGAVKVNAIR
EG+ ++ G +S + E H+Y+L+RRT +EMLRDRGY ++ DI+LSLQ FR +YG+ PDVD L+ISA HR D SK++ V+FCGTG VKVNA+R
Subjt: EGEPNQVEFGTCLSSYIDNGTTESHRYFLSRRTVLEMLRDRGYTLNSPDIDLSLQHFREIYGQSPDVDRLKISAVHRSDPSKRVLVIFCGTGAVKVNAIR
Query: NIAGQIANKDSLHGLILIVQNQITNQAMKAVELFSFKVEIFQ
IA + +++++ GLIL++Q+ ITNQA+KAVELFSFKVE+F+
Subjt: NIAGQIANKDSLHGLILIVQNQITNQAMKAVELFSFKVEIFQ
|
|
| Arabidopsis top hits | e value | %identity | Alignment |
|---|
| AT2G41340.1 RNA polymerase II fifth largest subunit, D | 2.9e-40 | 54.93 | Show/hide |
Query: EGEPNQVEFGTCLSSYIDNGTTESHRYFLSRRTVLEMLRDRGYTLNSPDIDLSLQHFREIYGQSPDVDRLKISAVHRSDPSKRVLVIFCGTGAVKVNAIR
EG+ ++ G +S + E H+Y+L+RRT +EMLRDRGY ++ DI+LSLQ FR +YG+ PDVD L+ISA HR D SK++ V+FCGTG VKVNA+R
Subjt: EGEPNQVEFGTCLSSYIDNGTTESHRYFLSRRTVLEMLRDRGYTLNSPDIDLSLQHFREIYGQSPDVDRLKISAVHRSDPSKRVLVIFCGTGAVKVNAIR
Query: NIAGQIANKDSLHGLILIVQNQITNQAMKAVELFSFKVEIFQ
IA + +++++ GLIL++Q+ ITNQA+KAVELFSFKVE+F+
Subjt: NIAGQIANKDSLHGLILIVQNQITNQAMKAVELFSFKVEIFQ
|
|
| AT3G22320.1 Eukaryotic rpb5 RNA polymerase subunit family protein | 6.0e-06 | 25.41 | Show/hide |
Query: ESHRYFLSRRTVLEMLRDRGYTLNSPDIDLSLQHFREIYGQSPDVDRLKISAVHRSDPSKRVLVIFCGTGAVKVNAIRNIAGQIANKDSLHGLILIVQNQ
E R + ++T+++MLRDRGY + ++ ++ Q F +G + + L R+D S ++ + F V V ++ ++ +++ IL+VQ
Subjt: ESHRYFLSRRTVLEMLRDRGYTLNSPDIDLSLQHFREIYGQSPDVDRLKISAVHRSDPSKRVLVIFCGTGAVKVNAIRNIAGQIANKDSLHGLILIVQNQ
Query: ITNQAMKAVELFS--FKVEIFQ
+T A + S F +E+FQ
Subjt: ITNQAMKAVELFS--FKVEIFQ
|
|
| AT3G54490.1 RNA polymerase II fifth largest subunit, E | 3.3e-28 | 41.5 | Show/hide |
Query: EEDGFEGEPNQVEFGT-CLSSYIDNGTTESHRYFLSRRTVLEMLRDRGYTLNSPDIDLSLQHFREIYGQSPDVDRLKISAVHRSDPSKRVLVIFCGTGAV
EE E + + GT C+S D G ES R++L+R T EMLRDRGY +N ++ L+L FR ++G+ P+++RL+I RSDP K++LV+F GT +
Subjt: EEDGFEGEPNQVEFGT-CLSSYIDNGTTESHRYFLSRRTVLEMLRDRGYTLNSPDIDLSLQHFREIYGQSPDVDRLKISAVHRSDPSKRVLVIFCGTGAV
Query: KVNAIRNIAGQIANKDSLHGLILIVQNQITNQAMKAVELFSFKVEIF
V ++R + QI+N LH +IL++Q+++ + A KA+ F F VE F
Subjt: KVNAIRNIAGQIANKDSLHGLILIVQNQITNQAMKAVELFSFKVEIF
|
|
| AT3G57080.1 Eukaryotic rpb5 RNA polymerase subunit family protein | 4.7e-43 | 60.31 | Show/hide |
Query: CLSSYIDNGTTESHRYFLSRRTVLEMLRDRGYTLNSPDIDLSLQHFREIYGQSPDVDRLKISAVHRSDPSKRVLVIFCGTGAVKVNAIRNIAGQIANKDS
CLS Y+D + ESHRY+L+RR L+MLRDRGY ++ DI+LSL FR +YG+ PDVDRL+ISA+HRSD +K+V ++F GT VKVNAIR++ I ++++
Subjt: CLSSYIDNGTTESHRYFLSRRTVLEMLRDRGYTLNSPDIDLSLQHFREIYGQSPDVDRLKISAVHRSDPSKRVLVIFCGTGAVKVNAIRNIAGQIANKDS
Query: LHGLILIVQNQITNQAMKAVELFSFKVEIFQ
+ GLIL++QN +TNQA+KA+ELFSFKVEIFQ
Subjt: LHGLILIVQNQITNQAMKAVELFSFKVEIFQ
|
|
| AT5G57980.1 RNA polymerase II fifth largest subunit, C | 3.2e-07 | 30.4 | Show/hide |
Query: ESHRYFLSRRTVLEMLRDRGYTLNSPDIDLSLQHFREIYGQS---PDVDRLKISAVHRSDPSKRVLVIFCGTGAVKVNAIRNIAGQIANKDSLHGLILIV
E R F RRTVL+MLRDRGYT+ D++L + F + + ++ + + L +SA +P+ ++ V + V V I+ D +H I++V
Subjt: ESHRYFLSRRTVLEMLRDRGYTLNSPDIDLSLQHFREIYGQS---PDVDRLKISAVHRSDPSKRVLVIFCGTGAVKVNAIRNIAGQIANKDSLHGLILIV
Query: QNQITNQAMKAVELFS--FKVEIFQ
IT A AV + +E+F+
Subjt: QNQITNQAMKAVELFS--FKVEIFQ
|
|
