; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CcUC10G201440 (gene) of Watermelon (PI 537277) v1 genome

Gene IDCcUC10G201440
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionUnknown protein
Genome locationCicolChr10:28551125..28551334
RNA-Seq ExpressionCcUC10G201440
SyntenyCcUC10G201440
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0053879.1 hypothetical protein E6C27_scaffold135G002720 [Cucumis melo var. makuwa]2.2e-0967.69Show/hide
Query:  MIRVGFDGKVLQNLLRRGSGAVDGGAGGAAGGSAATSSAAIAGSSCACFHFGSSCFLCFLYFSAA
        ++ VGFDGKV +  L RGS A+DGGA GA+ G AA SS  IAGSSCACF  G+SCFLCFL+FSAA
Subjt:  MIRVGFDGKVLQNLLRRGSGAVDGGAGGAAGGSAATSSAAIAGSSCACFHFGSSCFLCFLYFSAA
TrEMBL top hitse value%identityAlignment
A0A0A0LEW1 Uncharacterized protein5.6e-1479.03Show/hide
Query:  VGFDGKVLQNLLRRGSGAVDGGAGGAAGGSAATSSAAIAGSSCACFHFGSSCFLCFLYFSAA
        VGFDGKVL++ LRRGSGA+DGGAGGA+GG AA SS  IA SSCACF  GSSCFLCFL+FSAA
Subjt:  VGFDGKVLQNLLRRGSGAVDGGAGGAAGGSAATSSAAIAGSSCACFHFGSSCFLCFLYFSAA
A0A5D3DPV7 Uncharacterized protein1.1e-0967.69Show/hide
Query:  MIRVGFDGKVLQNLLRRGSGAVDGGAGGAAGGSAATSSAAIAGSSCACFHFGSSCFLCFLYFSAA
        ++ VGFDGKV +  L RGS A+DGGA GA+ G AA SS  IAGSSCACF  G+SCFLCFL+FSAA
Subjt:  MIRVGFDGKVLQNLLRRGSGAVDGGAGGAAGGSAATSSAAIAGSSCACFHFGSSCFLCFLYFSAA
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATCAAGTCGATGATCCGCGTCGGTTTTGATGGTAAAGTTTTACAGAATCTTCTGCGGCGTGGTTCTGGTGCTGTGGACGGCGGCGCTGGTGGTGCTGCCGGTGGTTC
TGCCGCCACTTCCTCCGCCGCCATTGCCGGTTCTTCTTGTGCCTGTTTTCATTTTGGGAGTTCTTGTTTTTTGTGCTTTCTCTACTTCTCAGCTGCCTGA
mRNA sequenceShow/hide mRNA sequence
ATGATCAAGTCGATGATCCGCGTCGGTTTTGATGGTAAAGTTTTACAGAATCTTCTGCGGCGTGGTTCTGGTGCTGTGGACGGCGGCGCTGGTGGTGCTGCCGGTGGTTC
TGCCGCCACTTCCTCCGCCGCCATTGCCGGTTCTTCTTGTGCCTGTTTTCATTTTGGGAGTTCTTGTTTTTTGTGCTTTCTCTACTTCTCAGCTGCCTGA
Protein sequenceShow/hide protein sequence
MIKSMIRVGFDGKVLQNLLRRGSGAVDGGAGGAAGGSAATSSAAIAGSSCACFHFGSSCFLCFLYFSAA