; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CcUC10G201730 (gene) of Watermelon (PI 537277) v1 genome

Gene IDCcUC10G201730
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionTFIIS N-terminal domain-containing protein
Genome locationCicolChr10:28893578..28897785
RNA-Seq ExpressionCcUC10G201730
SyntenyCcUC10G201730
Gene Ontology termsGO:0005634 - nucleus (cellular component)
InterPro domainsIPR003617 - Transcription elongation factor, TFIIS/CRSP70, N-terminal, sub-type
IPR017923 - Transcription factor IIS, N-terminal
IPR035441 - TFIIS/LEDGF domain superfamily
IPR044805 - Mediator of RNA polymerase II transcription subunit 26a/b-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004136624.1 probable mediator of RNA polymerase II transcription subunit 26b [Cucumis sativus]2.4e-23795.81Show/hide
Query:  MAAKSGSLDSWRNYFRNANSDIFGIIDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRCLGCDRVELAVAGDIDGDDGETGFKSDFAGDGCEFEAGGSK
        MAAKSGSLDSWRNYFRNANSDIFGIIDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRCLGCDRVELAVAGDIDGDDGETGFKSDF  DGCEFEAGGSK
Subjt:  MAAKSGSLDSWRNYFRNANSDIFGIIDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRCLGCDRVELAVAGDIDGDDGETGFKSDFAGDGCEFEAGGSK

Query:  ESKVYSSRDDIGEMNCNRVSNFSFGEAEALTDEIEQESQIVGEVLRIKEILNNFEEESDSVLFESLRRLELMALSVDTLRATEIGKAVNGLRKHGSKRIR
        ESKVYSSRDDIGEMNCNRVSNFSFGEAEALTDEIEQESQIVGEVLRIKEILNNFE+ESD VLFESLRRLELMALSVDTL+ATEIGKAVN LRKHGSKRIR
Subjt:  ESKVYSSRDDIGEMNCNRVSNFSFGEAEALTDEIEQESQIVGEVLRIKEILNNFEEESDSVLFESLRRLELMALSVDTLRATEIGKAVNGLRKHGSKRIR

Query:  HLARVLIMEWKEMVDVWVKATAAVQGAEVTPDSKNKSAAVKEEDDYEEEEGLPSPPLDEAAFFTTQPTSMELSQFFDGMDDDGNPRNSGDFVKNRNNVRK
        HLARVLIMEWKEMVD+WV+ATAAVQGAEVTPDSKNKSAAVKEEDDY EEEGLPSPPLDEAAFFTTQPTSMELSQFFDGMDDDGNPRNSGDFVKNRNNVRK
Subjt:  HLARVLIMEWKEMVDVWVKATAAVQGAEVTPDSKNKSAAVKEEDDYEEEEGLPSPPLDEAAFFTTQPTSMELSQFFDGMDDDGNPRNSGDFVKNRNNVRK

Query:  TSNGNQNPMRCNQQTAQEVNVLAKENKTQMKEQVVKP-NKPSSNTNSGLLRPQKLSTEQKDNHEKFQRKLDKPTIPKRNQQDNFKCSDEVAVQVKLEATK
        TSNGNQNP RCNQQT +EVNVL+KENKTQMKEQVVKP NKPSSNTNSGLLR QKLSTEQKDNHEKFQRKL+KPTIPKRNQQDNFKCSDEVAVQVKLEATK
Subjt:  TSNGNQNPMRCNQQTAQEVNVLAKENKTQMKEQVVKP-NKPSSNTNSGLLRPQKLSTEQKDNHEKFQRKLDKPTIPKRNQQDNFKCSDEVAVQVKLEATK

Query:  RKLQESYQQAENAKKQRTIQVMELHDLPKQGLGHRNPHLKSGGYNRHWANGRR
        RKLQESYQQAENAKKQRTIQVMELHDLPKQG+GHRNPHLKSGG+NR+WANGRR
Subjt:  RKLQESYQQAENAKKQRTIQVMELHDLPKQGLGHRNPHLKSGGYNRHWANGRR

XP_008443218.1 PREDICTED: probable mediator of RNA polymerase II transcription subunit 26b [Cucumis melo]4.4e-23996.25Show/hide
Query:  MAAKSGSLDSWRNYFRNANSDIFGIIDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRCLGCDRVELAVAGDIDGDDGETGFKSDFAGDGCEFEAGGSK
        MAAKSGSLDSWRNYFRNANSDIFGIIDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRCLGCDRVELAVAGDIDGDDGETGFKSDFAGDGCEFEAGGSK
Subjt:  MAAKSGSLDSWRNYFRNANSDIFGIIDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRCLGCDRVELAVAGDIDGDDGETGFKSDFAGDGCEFEAGGSK

Query:  ESKVYSSRDDIGEMNCNRVSNFSFGEAEALTDEIEQESQIVGEVLRIKEILNNFEEESDSVLFESLRRLELMALSVDTLRATEIGKAVNGLRKHGSKRIR
        ESKVYSSRDDIGEMNCNRVSNFSFGEAEALTDEIEQESQIVGEVLRIKEILNNFE+ESDSVLFESLRRLELMALSVDTL+ATEIGKAVN LRKHGSKRIR
Subjt:  ESKVYSSRDDIGEMNCNRVSNFSFGEAEALTDEIEQESQIVGEVLRIKEILNNFEEESDSVLFESLRRLELMALSVDTLRATEIGKAVNGLRKHGSKRIR

Query:  HLARVLIMEWKEMVDVWVKATAAVQGAEVTPDSKNKSAAVKEEDDYEEEEGLPSPPLDEAAFFTTQPTSMELSQFFDGMDDDGNPRNSGDFVKNRNNVRK
        HLARVLIMEWK+MVDVWV+ATAAVQGAEVTPDSK+KSAAVKEEDDY EEEGLPSPPLDEAAFFTTQPTSMELSQFFDGMDDDGNPRNSGDFVKNRNNVRK
Subjt:  HLARVLIMEWKEMVDVWVKATAAVQGAEVTPDSKNKSAAVKEEDDYEEEEGLPSPPLDEAAFFTTQPTSMELSQFFDGMDDDGNPRNSGDFVKNRNNVRK

Query:  TSNGNQNPMRCNQQTAQEVNVLAKENKTQMKEQVVKP-NKPSSNTNSGLLRPQKLSTEQKDNHEKFQRKLDKPTIPKRNQQDNFKCSDEVAVQVKLEATK
        TSNGNQNP RCNQQT +EVNVL+KENKTQMKEQVVKP NKPSSNTNSGLLR QKLSTEQKDNHEKFQRKL+KPTIPKRNQQDNFKCSDEVAVQVKLEATK
Subjt:  TSNGNQNPMRCNQQTAQEVNVLAKENKTQMKEQVVKP-NKPSSNTNSGLLRPQKLSTEQKDNHEKFQRKLDKPTIPKRNQQDNFKCSDEVAVQVKLEATK

Query:  RKLQESYQQAENAKKQRTIQVMELHDLPKQGLGHRNPHLKSGGYNRHWANGRR
        RKLQESYQQAENAKKQRTIQVMELHDLPKQG+GHRNPHLKSGG+NRHW NGRR
Subjt:  RKLQESYQQAENAKKQRTIQVMELHDLPKQGLGHRNPHLKSGGYNRHWANGRR

XP_023539160.1 probable mediator of RNA polymerase II transcription subunit 26b [Cucurbita pepo subsp. pepo]1.3e-20985.62Show/hide
Query:  MAAKSGSLDSWRNYFRNANSDIFGIIDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRCLGCDRVELAVAGDIDGDDGETGFKSDFAGDGCEFEAGGSK
        M+AKS SLD WR+YFRNANSDIF +IDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRCLGCDRVELAVAGD+   DGETGFKSD AGDG  FE GGSK
Subjt:  MAAKSGSLDSWRNYFRNANSDIFGIIDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRCLGCDRVELAVAGDIDGDDGETGFKSDFAGDGCEFEAGGSK

Query:  ESKVYSSRDDIGEMNCNRVSNFSFGEAEALTDEIEQESQIVGEVLRIKEILNNFEEESDSVLFESLRRLELMALSVDTLRATEIGKAVNGLRKHGSKRIR
        ESKVYSSRDD GEMN N+VSN+SFGEAEALTDEIEQES+IVGEVLRIKEILNNFEEESDSVLFESLRRLELMALSVD L+ATEIGKAVNGLRKHGSKRIR
Subjt:  ESKVYSSRDDIGEMNCNRVSNFSFGEAEALTDEIEQESQIVGEVLRIKEILNNFEEESDSVLFESLRRLELMALSVDTLRATEIGKAVNGLRKHGSKRIR

Query:  HLARVLIMEWKEMVDVWVKATAAVQGAEVTPDSKNKSAAVKEEDDYEEEEGLPSPPLDEAAFFTTQPTSMELSQFFDGMDDDGNPRNSGDFVKNRNNVRK
        HL R LI EWKEMVD+WVKATAAV G+EVTPDSK+  A+ +EEDDY  E+GLPSPPLDEAAFFTTQPTSMELSQFFDGMDDDGNPRNSG+FVK  +N RK
Subjt:  HLARVLIMEWKEMVDVWVKATAAVQGAEVTPDSKNKSAAVKEEDDYEEEEGLPSPPLDEAAFFTTQPTSMELSQFFDGMDDDGNPRNSGDFVKNRNNVRK

Query:  TSNGNQNPMRCNQQTAQEVNVLAKENKTQMKEQVVKPNKPSSNTNSGLLRPQKLSTEQKDNHEKFQRKLDKPTIPKRNQQDNFKCSDEVAVQVKLEATKR
        TSNG+QNPMRC QQT +EVNV+AK+NK+QMKEQVVKPNKP SN NSGL RPQK S+ QKDNHEK QRK++KPTIPKR+ QD FKCSDEVAVQVKLEATKR
Subjt:  TSNGNQNPMRCNQQTAQEVNVLAKENKTQMKEQVVKPNKPSSNTNSGLLRPQKLSTEQKDNHEKFQRKLDKPTIPKRNQQDNFKCSDEVAVQVKLEATKR

Query:  KLQESYQQAENAKKQRTIQVMELHDLPKQGLGHRNPHLKSGGYNRHWANGRR
        KLQESYQQAENAKKQRTIQVMELHD+PKQG+GHRN HLKSGG+NRHW NGRR
Subjt:  KLQESYQQAENAKKQRTIQVMELHDLPKQGLGHRNPHLKSGGYNRHWANGRR

XP_038904902.1 probable mediator of RNA polymerase II transcription subunit 26b isoform X1 [Benincasa hispida]9.5e-24297.12Show/hide
Query:  MAAKSGSLDSWRNYFRNANSDIFGIIDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRCLGCDRVELAVAGDIDGDDGETGFKSDFAGDGCEFEAGGSK
        MAAKSGSLDSWRNYFRNANSDIFGIIDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRCLGCDRVELAVAGDIDGDDGETGFKSDFAGDGCEFEAGGSK
Subjt:  MAAKSGSLDSWRNYFRNANSDIFGIIDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRCLGCDRVELAVAGDIDGDDGETGFKSDFAGDGCEFEAGGSK

Query:  ESKVYSSRDDIGEMNCNRVSNFSFGEAEALTDEIEQESQIVGEVLRIKEILNNFEEESDSVLFESLRRLELMALSVDTLRATEIGKAVNGLRKHGSKRIR
        ESKVYSSRDDIGEMNCNRVSNFSFGEAEALTDEIEQESQIVGEVLRIKEILNNFEEESDSVLFESLRRLELMALSVDTL+ATEIGKAVNGLRKHGSK IR
Subjt:  ESKVYSSRDDIGEMNCNRVSNFSFGEAEALTDEIEQESQIVGEVLRIKEILNNFEEESDSVLFESLRRLELMALSVDTLRATEIGKAVNGLRKHGSKRIR

Query:  HLARVLIMEWKEMVDVWVKATAAVQGAEVTPDSKNKSAAVKEEDDYEEEEGLPSPPLDEAAFFTTQPTSMELSQFFDGMDDDGNPRNSGDFVKNRNNVRK
        HLARVLIMEWKEMVD WVKATAAVQGAEVTPDSKNKSA+VKEED+YEEEEGLPSPPLDEAAFFTTQPTSMELSQFFDGMDDDGNPRNSGDFVKNRNNVRK
Subjt:  HLARVLIMEWKEMVDVWVKATAAVQGAEVTPDSKNKSAAVKEEDDYEEEEGLPSPPLDEAAFFTTQPTSMELSQFFDGMDDDGNPRNSGDFVKNRNNVRK

Query:  TSNGNQNPMRCNQQTAQEVNVLAKENKTQMKEQVVKPNKPSSNTNSGLLRPQKLSTEQKDNHEKFQRKLDKPTIPKRNQQDNFKCSDEVAVQVKLEATKR
        TSNGNQNP+R NQQTA EVNVLAKEN TQMKEQVVKPN+PSSNTNSGLLRPQKLSTEQKDNHEKFQRKLDKPTIPKRNQQ N+KCSDEVAVQVKLEATKR
Subjt:  TSNGNQNPMRCNQQTAQEVNVLAKENKTQMKEQVVKPNKPSSNTNSGLLRPQKLSTEQKDNHEKFQRKLDKPTIPKRNQQDNFKCSDEVAVQVKLEATKR

Query:  KLQESYQQAENAKKQRTIQVMELHDLPKQGLGHRNPHLKSGGYNRHWANGRR
        KLQESYQQAENAKKQRTIQVMELHDLPKQGLGHRNPHLKSGGYNR+WANGRR
Subjt:  KLQESYQQAENAKKQRTIQVMELHDLPKQGLGHRNPHLKSGGYNRHWANGRR

XP_038904903.1 probable mediator of RNA polymerase II transcription subunit 26b isoform X2 [Benincasa hispida]4.4e-23996.68Show/hide
Query:  MAAKSGSLDSWRNYFRNANSDIFGIIDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRCLGCDRVELAVAGDIDGDDGETGFKSDFAGDGCEFEAGGSK
        MAAKSGSLDSWRNYFRNANSDIFGIIDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRCLGCDRVELAVAGDIDGDDGETGFKSDFAGDGCEFEAGGSK
Subjt:  MAAKSGSLDSWRNYFRNANSDIFGIIDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRCLGCDRVELAVAGDIDGDDGETGFKSDFAGDGCEFEAGGSK

Query:  ESKVYSSRDDIGEMNCNRVSNFSFGEAEALTDEIEQESQIVGEVLRIKEILNNFEEESDSVLFESLRRLELMALSVDTLRATEIGKAVNGLRKHGSKRIR
        ESKVYSSRDDIGEMNCNRVSNFSFGEAEALTDEIEQESQIVGEVLRIKEILNNFEEESDSVLFESLRRLELMALSVDTL+ATEIGKAVNGLRKHGSK IR
Subjt:  ESKVYSSRDDIGEMNCNRVSNFSFGEAEALTDEIEQESQIVGEVLRIKEILNNFEEESDSVLFESLRRLELMALSVDTLRATEIGKAVNGLRKHGSKRIR

Query:  HLARVLIMEWKEMVDVWVKATAAVQGAEVTPDSKNKSAAVKEEDDYEEEEGLPSPPLDEAAFFTTQPTSMELSQFFDGMDDDGNPRNSGDFVKNRNNVRK
        HLARVLIMEWKEMVD WVKATAAVQ  EVTPDSKNKSA+VKEED+YEEEEGLPSPPLDEAAFFTTQPTSMELSQFFDGMDDDGNPRNSGDFVKNRNNVRK
Subjt:  HLARVLIMEWKEMVDVWVKATAAVQGAEVTPDSKNKSAAVKEEDDYEEEEGLPSPPLDEAAFFTTQPTSMELSQFFDGMDDDGNPRNSGDFVKNRNNVRK

Query:  TSNGNQNPMRCNQQTAQEVNVLAKENKTQMKEQVVKPNKPSSNTNSGLLRPQKLSTEQKDNHEKFQRKLDKPTIPKRNQQDNFKCSDEVAVQVKLEATKR
        TSNGNQNP+R NQQTA EVNVLAKEN TQMKEQVVKPN+PSSNTNSGLLRPQKLSTEQKDNHEKFQRKLDKPTIPKRNQQ N+KCSDEVAVQVKLEATKR
Subjt:  TSNGNQNPMRCNQQTAQEVNVLAKENKTQMKEQVVKPNKPSSNTNSGLLRPQKLSTEQKDNHEKFQRKLDKPTIPKRNQQDNFKCSDEVAVQVKLEATKR

Query:  KLQESYQQAENAKKQRTIQVMELHDLPKQGLGHRNPHLKSGGYNRHWANGRR
        KLQESYQQAENAKKQRTIQVMELHDLPKQGLGHRNPHLKSGGYNR+WANGRR
Subjt:  KLQESYQQAENAKKQRTIQVMELHDLPKQGLGHRNPHLKSGGYNRHWANGRR

TrEMBL top hitse value%identityAlignment
A0A0A0LBK9 TFIIS N-terminal domain-containing protein1.2e-23795.81Show/hide
Query:  MAAKSGSLDSWRNYFRNANSDIFGIIDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRCLGCDRVELAVAGDIDGDDGETGFKSDFAGDGCEFEAGGSK
        MAAKSGSLDSWRNYFRNANSDIFGIIDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRCLGCDRVELAVAGDIDGDDGETGFKSDF  DGCEFEAGGSK
Subjt:  MAAKSGSLDSWRNYFRNANSDIFGIIDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRCLGCDRVELAVAGDIDGDDGETGFKSDFAGDGCEFEAGGSK

Query:  ESKVYSSRDDIGEMNCNRVSNFSFGEAEALTDEIEQESQIVGEVLRIKEILNNFEEESDSVLFESLRRLELMALSVDTLRATEIGKAVNGLRKHGSKRIR
        ESKVYSSRDDIGEMNCNRVSNFSFGEAEALTDEIEQESQIVGEVLRIKEILNNFE+ESD VLFESLRRLELMALSVDTL+ATEIGKAVN LRKHGSKRIR
Subjt:  ESKVYSSRDDIGEMNCNRVSNFSFGEAEALTDEIEQESQIVGEVLRIKEILNNFEEESDSVLFESLRRLELMALSVDTLRATEIGKAVNGLRKHGSKRIR

Query:  HLARVLIMEWKEMVDVWVKATAAVQGAEVTPDSKNKSAAVKEEDDYEEEEGLPSPPLDEAAFFTTQPTSMELSQFFDGMDDDGNPRNSGDFVKNRNNVRK
        HLARVLIMEWKEMVD+WV+ATAAVQGAEVTPDSKNKSAAVKEEDDY EEEGLPSPPLDEAAFFTTQPTSMELSQFFDGMDDDGNPRNSGDFVKNRNNVRK
Subjt:  HLARVLIMEWKEMVDVWVKATAAVQGAEVTPDSKNKSAAVKEEDDYEEEEGLPSPPLDEAAFFTTQPTSMELSQFFDGMDDDGNPRNSGDFVKNRNNVRK

Query:  TSNGNQNPMRCNQQTAQEVNVLAKENKTQMKEQVVKP-NKPSSNTNSGLLRPQKLSTEQKDNHEKFQRKLDKPTIPKRNQQDNFKCSDEVAVQVKLEATK
        TSNGNQNP RCNQQT +EVNVL+KENKTQMKEQVVKP NKPSSNTNSGLLR QKLSTEQKDNHEKFQRKL+KPTIPKRNQQDNFKCSDEVAVQVKLEATK
Subjt:  TSNGNQNPMRCNQQTAQEVNVLAKENKTQMKEQVVKP-NKPSSNTNSGLLRPQKLSTEQKDNHEKFQRKLDKPTIPKRNQQDNFKCSDEVAVQVKLEATK

Query:  RKLQESYQQAENAKKQRTIQVMELHDLPKQGLGHRNPHLKSGGYNRHWANGRR
        RKLQESYQQAENAKKQRTIQVMELHDLPKQG+GHRNPHLKSGG+NR+WANGRR
Subjt:  RKLQESYQQAENAKKQRTIQVMELHDLPKQGLGHRNPHLKSGGYNRHWANGRR

A0A1S3B7K4 probable mediator of RNA polymerase II transcription subunit 26b2.1e-23996.25Show/hide
Query:  MAAKSGSLDSWRNYFRNANSDIFGIIDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRCLGCDRVELAVAGDIDGDDGETGFKSDFAGDGCEFEAGGSK
        MAAKSGSLDSWRNYFRNANSDIFGIIDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRCLGCDRVELAVAGDIDGDDGETGFKSDFAGDGCEFEAGGSK
Subjt:  MAAKSGSLDSWRNYFRNANSDIFGIIDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRCLGCDRVELAVAGDIDGDDGETGFKSDFAGDGCEFEAGGSK

Query:  ESKVYSSRDDIGEMNCNRVSNFSFGEAEALTDEIEQESQIVGEVLRIKEILNNFEEESDSVLFESLRRLELMALSVDTLRATEIGKAVNGLRKHGSKRIR
        ESKVYSSRDDIGEMNCNRVSNFSFGEAEALTDEIEQESQIVGEVLRIKEILNNFE+ESDSVLFESLRRLELMALSVDTL+ATEIGKAVN LRKHGSKRIR
Subjt:  ESKVYSSRDDIGEMNCNRVSNFSFGEAEALTDEIEQESQIVGEVLRIKEILNNFEEESDSVLFESLRRLELMALSVDTLRATEIGKAVNGLRKHGSKRIR

Query:  HLARVLIMEWKEMVDVWVKATAAVQGAEVTPDSKNKSAAVKEEDDYEEEEGLPSPPLDEAAFFTTQPTSMELSQFFDGMDDDGNPRNSGDFVKNRNNVRK
        HLARVLIMEWK+MVDVWV+ATAAVQGAEVTPDSK+KSAAVKEEDDY EEEGLPSPPLDEAAFFTTQPTSMELSQFFDGMDDDGNPRNSGDFVKNRNNVRK
Subjt:  HLARVLIMEWKEMVDVWVKATAAVQGAEVTPDSKNKSAAVKEEDDYEEEEGLPSPPLDEAAFFTTQPTSMELSQFFDGMDDDGNPRNSGDFVKNRNNVRK

Query:  TSNGNQNPMRCNQQTAQEVNVLAKENKTQMKEQVVKP-NKPSSNTNSGLLRPQKLSTEQKDNHEKFQRKLDKPTIPKRNQQDNFKCSDEVAVQVKLEATK
        TSNGNQNP RCNQQT +EVNVL+KENKTQMKEQVVKP NKPSSNTNSGLLR QKLSTEQKDNHEKFQRKL+KPTIPKRNQQDNFKCSDEVAVQVKLEATK
Subjt:  TSNGNQNPMRCNQQTAQEVNVLAKENKTQMKEQVVKP-NKPSSNTNSGLLRPQKLSTEQKDNHEKFQRKLDKPTIPKRNQQDNFKCSDEVAVQVKLEATK

Query:  RKLQESYQQAENAKKQRTIQVMELHDLPKQGLGHRNPHLKSGGYNRHWANGRR
        RKLQESYQQAENAKKQRTIQVMELHDLPKQG+GHRNPHLKSGG+NRHW NGRR
Subjt:  RKLQESYQQAENAKKQRTIQVMELHDLPKQGLGHRNPHLKSGGYNRHWANGRR

A0A5A7UDQ2 Putative mediator of RNA polymerase II transcription subunit 26b2.1e-23996.25Show/hide
Query:  MAAKSGSLDSWRNYFRNANSDIFGIIDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRCLGCDRVELAVAGDIDGDDGETGFKSDFAGDGCEFEAGGSK
        MAAKSGSLDSWRNYFRNANSDIFGIIDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRCLGCDRVELAVAGDIDGDDGETGFKSDFAGDGCEFEAGGSK
Subjt:  MAAKSGSLDSWRNYFRNANSDIFGIIDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRCLGCDRVELAVAGDIDGDDGETGFKSDFAGDGCEFEAGGSK

Query:  ESKVYSSRDDIGEMNCNRVSNFSFGEAEALTDEIEQESQIVGEVLRIKEILNNFEEESDSVLFESLRRLELMALSVDTLRATEIGKAVNGLRKHGSKRIR
        ESKVYSSRDDIGEMNCNRVSNFSFGEAEALTDEIEQESQIVGEVLRIKEILNNFE+ESDSVLFESLRRLELMALSVDTL+ATEIGKAVN LRKHGSKRIR
Subjt:  ESKVYSSRDDIGEMNCNRVSNFSFGEAEALTDEIEQESQIVGEVLRIKEILNNFEEESDSVLFESLRRLELMALSVDTLRATEIGKAVNGLRKHGSKRIR

Query:  HLARVLIMEWKEMVDVWVKATAAVQGAEVTPDSKNKSAAVKEEDDYEEEEGLPSPPLDEAAFFTTQPTSMELSQFFDGMDDDGNPRNSGDFVKNRNNVRK
        HLARVLIMEWK+MVDVWV+ATAAVQGAEVTPDSK+KSAAVKEEDDY EEEGLPSPPLDEAAFFTTQPTSMELSQFFDGMDDDGNPRNSGDFVKNRNNVRK
Subjt:  HLARVLIMEWKEMVDVWVKATAAVQGAEVTPDSKNKSAAVKEEDDYEEEEGLPSPPLDEAAFFTTQPTSMELSQFFDGMDDDGNPRNSGDFVKNRNNVRK

Query:  TSNGNQNPMRCNQQTAQEVNVLAKENKTQMKEQVVKP-NKPSSNTNSGLLRPQKLSTEQKDNHEKFQRKLDKPTIPKRNQQDNFKCSDEVAVQVKLEATK
        TSNGNQNP RCNQQT +EVNVL+KENKTQMKEQVVKP NKPSSNTNSGLLR QKLSTEQKDNHEKFQRKL+KPTIPKRNQQDNFKCSDEVAVQVKLEATK
Subjt:  TSNGNQNPMRCNQQTAQEVNVLAKENKTQMKEQVVKP-NKPSSNTNSGLLRPQKLSTEQKDNHEKFQRKLDKPTIPKRNQQDNFKCSDEVAVQVKLEATK

Query:  RKLQESYQQAENAKKQRTIQVMELHDLPKQGLGHRNPHLKSGGYNRHWANGRR
        RKLQESYQQAENAKKQRTIQVMELHDLPKQG+GHRNPHLKSGG+NRHW NGRR
Subjt:  RKLQESYQQAENAKKQRTIQVMELHDLPKQGLGHRNPHLKSGGYNRHWANGRR

A0A6J1FCK1 probable mediator of RNA polymerase II transcription subunit 26b5.1e-20985.4Show/hide
Query:  MAAKSGSLDSWRNYFRNANSDIFGIIDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRCLGCDRVELAVAGDIDGDDGETGFKSDFAGDGCEFEAGGSK
        M+AKSGSLD WR+YFRNANSDIF +IDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRCLGCDRVELAVAGD+   DGETGFKSD AGDG  FE GGSK
Subjt:  MAAKSGSLDSWRNYFRNANSDIFGIIDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRCLGCDRVELAVAGDIDGDDGETGFKSDFAGDGCEFEAGGSK

Query:  ESKVYSSRDDIGEMNCNRVSNFSFGEAEALTDEIEQESQIVGEVLRIKEILNNFEEESDSVLFESLRRLELMALSVDTLRATEIGKAVNGLRKHGSKRIR
        ESKVYSSRDD GEMN N+VSN+SFGEAEALTDEIEQES+IVGEVLRIKEILNNFEEESDSVLFESLRRLELMALSVD L+ATEIGKAVNGLRKHGSKRIR
Subjt:  ESKVYSSRDDIGEMNCNRVSNFSFGEAEALTDEIEQESQIVGEVLRIKEILNNFEEESDSVLFESLRRLELMALSVDTLRATEIGKAVNGLRKHGSKRIR

Query:  HLARVLIMEWKEMVDVWVKATAAVQGAEVTPDSKNKSAAVKEEDDYEEEEGLPSPPLDEAAFFTTQPTSMELSQFFDGMDDDGNPRNSGDFVKNRNNVRK
        HL R LI EWKEMVD+WVKATAAV G+EVTPDSK+   + +EEDDY  E+GLPSPPLDEAAFFTTQPTSMELSQFFDGMDDDGNPRNSG+FVK R+N RK
Subjt:  HLARVLIMEWKEMVDVWVKATAAVQGAEVTPDSKNKSAAVKEEDDYEEEEGLPSPPLDEAAFFTTQPTSMELSQFFDGMDDDGNPRNSGDFVKNRNNVRK

Query:  TSNGNQNPMRCNQQTAQEVNVLAKENKTQMKEQVVKPNKPSSNTNSGLLRPQKLSTEQKDNHEKFQRKLDKPTIPKRNQQDNFKCSDEVAVQVKLEATKR
        TS+G+QNPMRC QQT +EVNV+AK+NK+QMKEQVVKPNKP SN NSG  R QK ST QKDNHEK QRK++KPTIPKR+ QD FKCSDEVAVQVKLEATKR
Subjt:  TSNGNQNPMRCNQQTAQEVNVLAKENKTQMKEQVVKPNKPSSNTNSGLLRPQKLSTEQKDNHEKFQRKLDKPTIPKRNQQDNFKCSDEVAVQVKLEATKR

Query:  KLQESYQQAENAKKQRTIQVMELHDLPKQGLGHRNPHLKSGGYNRHWANGRR
        KLQESYQQAENAKKQRTIQVMELHD+PKQG+GHRN HLKSGG+NRHW NGRR
Subjt:  KLQESYQQAENAKKQRTIQVMELHDLPKQGLGHRNPHLKSGGYNRHWANGRR

A0A6J1I7W1 probable mediator of RNA polymerase II transcription subunit 26b1.1e-20884.93Show/hide
Query:  MAAKSGSLDSWRNYFRNANSDIFGIIDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRCLGCDRVELAVAGDIDGDDGETGFKSDFAGDGCEFEAGGSK
        M+AKSGSLD WR+YFRNANSDIF +IDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRCLGCDRVELAVAGD+   D ETGFKSD AGDG  FE GGSK
Subjt:  MAAKSGSLDSWRNYFRNANSDIFGIIDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRCLGCDRVELAVAGDIDGDDGETGFKSDFAGDGCEFEAGGSK

Query:  ESKVYSSRDDIGEMNCNRVSNFSFGEAEALTDEIEQESQIVGEVLRIKEILNNFEEESDSVLFESLRRLELMALSVDTLRATEIGKAVNGLRKHGSKRIR
        ESKVYSSRDD GEMN N+VSN+SFGEAEALTDEIEQES+IVGEVLRIKEILNNFEEESDSVLFESLRRLELMALSVD L+ATEIGKAVNGLRKHGSKRIR
Subjt:  ESKVYSSRDDIGEMNCNRVSNFSFGEAEALTDEIEQESQIVGEVLRIKEILNNFEEESDSVLFESLRRLELMALSVDTLRATEIGKAVNGLRKHGSKRIR

Query:  HLARVLIMEWKEMVDVWVKATAAVQGAEVTPDSKNKSAAVKEEDDYEEEEGLPSPPLDEAAFFTTQPTSMELSQFFDGMDDDGNPRNSGDFVKNRNNVRK
        HL R LI EWKEMVD+WVKATAAV G+EVTPDSK+  A+ +EEDDY  E+GLPSPPLDEAAFFTTQPTSMELSQFFDGMDDDGNPRNSG+FVK R+N RK
Subjt:  HLARVLIMEWKEMVDVWVKATAAVQGAEVTPDSKNKSAAVKEEDDYEEEEGLPSPPLDEAAFFTTQPTSMELSQFFDGMDDDGNPRNSGDFVKNRNNVRK

Query:  TSNGNQNPMRCNQQTAQEVNVLA------KENKTQMKEQVVKPNKPSSNTNSGLLRPQKLSTEQKDNHEKFQRKLDKPTIPKRNQQDNFKCSDEVAVQVK
        TSNG+QNPMRC QQT +EVNV+A      K+NK+QMKEQVVKPNKP SN NSGL RPQK ST QKDNHEK QRK++KPTIPKR+ QD FKCSDEVAVQVK
Subjt:  TSNGNQNPMRCNQQTAQEVNVLA------KENKTQMKEQVVKPNKPSSNTNSGLLRPQKLSTEQKDNHEKFQRKLDKPTIPKRNQQDNFKCSDEVAVQVK

Query:  LEATKRKLQESYQQAENAKKQRTIQVMELHDLPKQGLGHRNPHLKSGGYNRHWANGRR
        LEATKRKLQESYQQAENAKKQRTIQVMELHD+PKQG+GHRN HLKSGG+NRHW NGRR
Subjt:  LEATKRKLQESYQQAENAKKQRTIQVMELHDLPKQGLGHRNPHLKSGGYNRHWANGRR

SwissProt top hitse value%identityAlignment
F4J4Y5 Probable mediator of RNA polymerase II transcription subunit 26a7.2e-6741.93Show/hide
Query:  SGSLDSWRNYFRNANSDIFGIIDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRCLGCDRVELAVAGDIDGDDGETGFKSDFAGDGCEFEAGGSKESKV
        S SLD+WR YFR  +SDIFGIID+AI+VAA+D PKEF+ R DRIAE LFSC+++RC+GCD +EL++AGD            + A +      GG +    
Subjt:  SGSLDSWRNYFRNANSDIFGIIDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRCLGCDRVELAVAGDIDGDDGETGFKSDFAGDGCEFEAGGSKESKV

Query:  YSSRDDIGEMNCNRVSNFSFGEAEALTDEIEQESQIVGEVLRIKEILNNFEEESDSVLFESLRRLELMALSVDTLRATEIGKAVNGLRKHGSKRIRHLAR
                            G++   T E E+ S  V EV+RI++IL+N ++E DSVL ESLR+LE M++SVD L+ TEIGKAVNGLR+H S +I  LA+
Subjt:  YSSRDDIGEMNCNRVSNFSFGEAEALTDEIEQESQIVGEVLRIKEILNNFEEESDSVLFESLRRLELMALSVDTLRATEIGKAVNGLRKHGSKRIRHLAR

Query:  VLIMEWKEMVDVWVKATAAVQGAEVTPDSKNKSAAVKEEDDYEEEEGLPSPPLDEAAFFTTQPTSMELSQFFDGMDDDGNPRNSGDFVKNRNNVRKTSNG
         L  EWK +VD W+     + G E TP+S N S         +EEE  PSPP D    +  +P   ELSQ  D +D DGNPR+S   V++++  +  S+ 
Subjt:  VLIMEWKEMVDVWVKATAAVQGAEVTPDSKNKSAAVKEEDDYEEEEGLPSPPLDEAAFFTTQPTSMELSQFFDGMDDDGNPRNSGDFVKNRNNVRKTSNG

Query:  NQNPMRCNQQTAQEVNVLAKENKTQMKEQVVKPNKPSSNTNSGLLRPQKLSTEQKDNHEKFQRKLDKPTIPKRN----QQDNFKCSDEVAVQVKLEATKR
         + P   N   A  V     + +T+ +E  V+P K S+       R  K S EQ  +    QRK    T  KR     QQD  K  D      K E  KR
Subjt:  NQNPMRCNQQTAQEVNVLAKENKTQMKEQVVKPNKPSSNTNSGLLRPQKLSTEQKDNHEKFQRKLDKPTIPKRN----QQDNFKCSDEVAVQVKLEATKR

Query:  KLQESYQQAENAKKQRTIQVMELHDLPKQGLGHRNPHLKSGGYNRH
        KLQESY Q ENAK+QRTIQV+E   +PKQ    + P LK     R+
Subjt:  KLQESYQQAENAKKQRTIQVMELHDLPKQGLGHRNPHLKSGGYNRH

F4KFC7 Probable mediator of RNA polymerase II transcription subunit 26c4.6e-2127.39Show/hide
Query:  LDSWRNYFRNANSDIFGIIDYAILVAASDCPKEFRLRRDRIAEQLFSCRL-TRCLGCD-----RVELAVAGDIDGDDGETGFKSDFAGDGCEFEAGGSKE
        LD +R+   NA  D++  ID AILVA+ D  +E + RRD I E+L++  +  +C  CD      V  A  G ++             G   E      +E
Subjt:  LDSWRNYFRNANSDIFGIIDYAILVAASDCPKEFRLRRDRIAEQLFSCRL-TRCLGCD-----RVELAVAGDIDGDDGETGFKSDFAGDGCEFEAGGSKE

Query:  SKVYSSRDDIGEMNCNRVSNFSFGEAEALTDEIEQESQIVGEVLRIKEILNNFEEESDSVLFESLRRLELMALSVDTLRATEIGKAVNGLRKHGSKRIRH
            ++ +++ E + N   +  F     L D+ EQ+S     ++ IKE L +  + S+  L E L+ LE M ++   L+ T+IG+ VN +RKH S  +R 
Subjt:  SKVYSSRDDIGEMNCNRVSNFSFGEAEALTDEIEQESQIVGEVLRIKEILNNFEEESDSVLFESLRRLELMALSVDTLRATEIGKAVNGLRKHGSKRIRH

Query:  LARVLIMEWKEMVDVWVKATAAVQGAEVTPDSKNKSAAVKEEDDYEEEEGLPSPPLDEAAFFTTQPTSMELSQFFDGMDDDGNPRNSGDFVKNRNNVRKT
        LA+ L+ +WKE VD WVK     Q  ++ P S      + +ED           P+ +A                     +G+ +   DF          
Subjt:  LARVLIMEWKEMVDVWVKATAAVQGAEVTPDSKNKSAAVKEEDDYEEEEGLPSPPLDEAAFFTTQPTSMELSQFFDGMDDDGNPRNSGDFVKNRNNVRKT

Query:  SNGNQNPMRCNQQTAQEVNVLAKENKTQMKEQVVKPNKPSSNTNSGLLRPQKLSTEQKDNHEKFQRKLDKPTIPKRNQQDNFKCSDEVAVQVKLEATKRK
             +P+  N  ++   N    E + + +    +P + S +      +P + S  Q+             TIP+          D+   +V  +  +++
Subjt:  SNGNQNPMRCNQQTAQEVNVLAKENKTQMKEQVVKPNKPSSNTNSGLLRPQKLSTEQKDNHEKFQRKLDKPTIPKRNQQDNFKCSDEVAVQVKLEATKRK

Query:  LQESYQQAENAKKQRTIQVMELHDLPKQGLGHRNPHLKSGGYN---RHW
        LQ++Y+QAENAKKQRTIQVM++HD+PK   G   P  + GG +   RHW
Subjt:  LQESYQQAENAKKQRTIQVMELHDLPKQGLGHRNPHLKSGGYN---RHW

Q14241 Elongin-A8.7e-0433.72Show/hide
Query:  LFESLRRLELMALSVDTLRATEIGKAVNGLRKHGSKRIRHLARVLIMEWKEMVDVWVKATAAVQGAEVTPDSKNKSAAVKEEDDYE
        L + L++L  + ++VD L  T +GK VN LRKH  + +   AR L+ +WK++V V   A    Q  E +   K    A+++E++ E
Subjt:  LFESLRRLELMALSVDTLRATEIGKAVNGLRKHGSKRIRHLARVLIMEWKEMVDVWVKATAAVQGAEVTPDSKNKSAAVKEEDDYE

Q8CB77 Elongin-A8.7e-0432.56Show/hide
Query:  LFESLRRLELMALSVDTLRATEIGKAVNGLRKHGSKRIRHLARVLIMEWKEMVDVWVKATAAVQGAEVTPDSKNKSAAVKEEDDYE
        L + L++L ++ ++VD L  T +GK VN  RKH  +++ + AR L+ +WK++V V   + A  Q  E     K    A++ E++ E
Subjt:  LFESLRRLELMALSVDTLRATEIGKAVNGLRKHGSKRIRHLARVLIMEWKEMVDVWVKATAAVQGAEVTPDSKNKSAAVKEEDDYE

Q9FHK9 Probable mediator of RNA polymerase II transcription subunit 26b3.8e-9249.14Show/hide
Query:  SGSLDSWRNYF-RNANSDIFGIIDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRCLGCDRVELAVAGDIDGDDGETGFKSDFAGDGCEFE-AGGSKES
        SGSLDSWR YF R  +SDIFGIID+AI+VAA+DCP +F+ RRD+IAE LFSCR+ RC+GCD +EL+V GD + + G TG          ++E AGGSKES
Subjt:  SGSLDSWRNYF-RNANSDIFGIIDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRCLGCDRVELAVAGDIDGDDGETGFKSDFAGDGCEFE-AGGSKES

Query:  KVYSSRDDIGEMNCNRVSNFSFGEAEALTDEIEQESQIVGEVLRIKEILNNFEEESDSVLFESLRRLELMALSVDTLRATEIGKAVNGLRKHGSKRIRHL
        K  SSR D    N   VSN++F EAEAL+DEIE+ S +  EV RIKEIL N E+E +SVL +SLR L+LM+L+VD L++TEIGKAVNGLRKH S +IR L
Subjt:  KVYSSRDDIGEMNCNRVSNFSFGEAEALTDEIEQESQIVGEVLRIKEILNNFEEESDSVLFESLRRLELMALSVDTLRATEIGKAVNGLRKHGSKRIRHL

Query:  ARVLIMEWKEMVDVWVKATAAVQGAEVTPDSKNKSAAVKEEDDYEEEEGLPSPPLDEAAFFTTQPTSMELSQFFDGMDDDGNPRNSGDFVKNRNNVRKTS
        A+ LI EWKE+VD WV  T  + GAE TP+S N S         +EEE  PS P D    FT +P   E+S FFD +D DGNPRNS +   +R + R+  
Subjt:  ARVLIMEWKEMVDVWVKATAAVQGAEVTPDSKNKSAAVKEEDDYEEEEGLPSPPLDEAAFFTTQPTSMELSQFFDGMDDDGNPRNSGDFVKNRNNVRKTS

Query:  NGNQNPMRCNQQTAQEVNVLAKENKTQMKEQ--VVKPNKPSSNTN-SGLLRPQKLSTEQKDNHEKFQ-RKLDKPTIPKR------------NQQDNFKCS
        N  +                 K   TQM+ Q    +  KPSS T+  G  RP K STEQ+  +E     K +KP I ++             QQ+  K  
Subjt:  NGNQNPMRCNQQTAQEVNVLAKENKTQMKEQ--VVKPNKPSSNTN-SGLLRPQKLSTEQKDNHEKFQ-RKLDKPTIPKR------------NQQDNFKCS

Query:  DEVAVQVKLEATKRKLQESYQQAENAKKQRTIQVMELHDLPKQGLGHRNPHLKSGGYNRHWANGRR
        D      K E  KRKLQESYQ  ENAKKQRTIQV+E+  +PKQG   +    + G  NR+WANGR+
Subjt:  DEVAVQVKLEATKRKLQESYQQAENAKKQRTIQVMELHDLPKQGLGHRNPHLKSGGYNRHWANGRR

Arabidopsis top hitse value%identityAlignment
AT3G10820.1 Transcription elongation factor (TFIIS) family protein4.7e-5345.19Show/hide
Query:  SGSLDSWRNYFRNANSDIFGIIDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRCLGCDRVELAVAGDIDGDDGETGFKSDFAGDGCEFEAGGSKESKV
        S SLD+WR YFR  +SDIFGIID+AI+VAA+D PKEF+ R DRIAE LFSC+++RC+GCD +EL++AGD            + A +      GG +    
Subjt:  SGSLDSWRNYFRNANSDIFGIIDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRCLGCDRVELAVAGDIDGDDGETGFKSDFAGDGCEFEAGGSKESKV

Query:  YSSRDDIGEMNCNRVSNFSFGEAEALTDEIEQESQIVGEVLRIKEILNNFEEESDSVLFESLRRLELMALSVDTLRATEIGKAVNGLRKHGSKRIRHLAR
                            G++   T E E+ S  V EV+RI++IL+N ++E DSVL ESLR+LE M++SVD L+ TEIGKAVNGLR+H S +I  LA+
Subjt:  YSSRDDIGEMNCNRVSNFSFGEAEALTDEIEQESQIVGEVLRIKEILNNFEEESDSVLFESLRRLELMALSVDTLRATEIGKAVNGLRKHGSKRIRHLAR

Query:  VLIMEWKEMVDVWVKATAAVQGAEVTPDSKNKSAAVKEEDDYEEEEGLPSPPLDEAAFFTTQPTSMELSQ
         L  EWK +VD W+     + G E TP+S N S         +EEE  PSPP D    +  +P   ELSQ
Subjt:  VLIMEWKEMVDVWVKATAAVQGAEVTPDSKNKSAAVKEEDDYEEEEGLPSPPLDEAAFFTTQPTSMELSQ

AT3G10820.2 Transcription elongation factor (TFIIS) family protein5.1e-6841.93Show/hide
Query:  SGSLDSWRNYFRNANSDIFGIIDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRCLGCDRVELAVAGDIDGDDGETGFKSDFAGDGCEFEAGGSKESKV
        S SLD+WR YFR  +SDIFGIID+AI+VAA+D PKEF+ R DRIAE LFSC+++RC+GCD +EL++AGD            + A +      GG +    
Subjt:  SGSLDSWRNYFRNANSDIFGIIDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRCLGCDRVELAVAGDIDGDDGETGFKSDFAGDGCEFEAGGSKESKV

Query:  YSSRDDIGEMNCNRVSNFSFGEAEALTDEIEQESQIVGEVLRIKEILNNFEEESDSVLFESLRRLELMALSVDTLRATEIGKAVNGLRKHGSKRIRHLAR
                            G++   T E E+ S  V EV+RI++IL+N ++E DSVL ESLR+LE M++SVD L+ TEIGKAVNGLR+H S +I  LA+
Subjt:  YSSRDDIGEMNCNRVSNFSFGEAEALTDEIEQESQIVGEVLRIKEILNNFEEESDSVLFESLRRLELMALSVDTLRATEIGKAVNGLRKHGSKRIRHLAR

Query:  VLIMEWKEMVDVWVKATAAVQGAEVTPDSKNKSAAVKEEDDYEEEEGLPSPPLDEAAFFTTQPTSMELSQFFDGMDDDGNPRNSGDFVKNRNNVRKTSNG
         L  EWK +VD W+     + G E TP+S N S         +EEE  PSPP D    +  +P   ELSQ  D +D DGNPR+S   V++++  +  S+ 
Subjt:  VLIMEWKEMVDVWVKATAAVQGAEVTPDSKNKSAAVKEEDDYEEEEGLPSPPLDEAAFFTTQPTSMELSQFFDGMDDDGNPRNSGDFVKNRNNVRKTSNG

Query:  NQNPMRCNQQTAQEVNVLAKENKTQMKEQVVKPNKPSSNTNSGLLRPQKLSTEQKDNHEKFQRKLDKPTIPKRN----QQDNFKCSDEVAVQVKLEATKR
         + P   N   A  V     + +T+ +E  V+P K S+       R  K S EQ  +    QRK    T  KR     QQD  K  D      K E  KR
Subjt:  NQNPMRCNQQTAQEVNVLAKENKTQMKEQVVKPNKPSSNTNSGLLRPQKLSTEQKDNHEKFQRKLDKPTIPKRN----QQDNFKCSDEVAVQVKLEATKR

Query:  KLQESYQQAENAKKQRTIQVMELHDLPKQGLGHRNPHLKSGGYNRH
        KLQESY Q ENAK+QRTIQV+E   +PKQ    + P LK     R+
Subjt:  KLQESYQQAENAKKQRTIQVMELHDLPKQGLGHRNPHLKSGGYNRH

AT5G05140.1 Transcription elongation factor (TFIIS) family protein2.7e-9349.14Show/hide
Query:  SGSLDSWRNYF-RNANSDIFGIIDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRCLGCDRVELAVAGDIDGDDGETGFKSDFAGDGCEFE-AGGSKES
        SGSLDSWR YF R  +SDIFGIID+AI+VAA+DCP +F+ RRD+IAE LFSCR+ RC+GCD +EL+V GD + + G TG          ++E AGGSKES
Subjt:  SGSLDSWRNYF-RNANSDIFGIIDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRCLGCDRVELAVAGDIDGDDGETGFKSDFAGDGCEFE-AGGSKES

Query:  KVYSSRDDIGEMNCNRVSNFSFGEAEALTDEIEQESQIVGEVLRIKEILNNFEEESDSVLFESLRRLELMALSVDTLRATEIGKAVNGLRKHGSKRIRHL
        K  SSR D    N   VSN++F EAEAL+DEIE+ S +  EV RIKEIL N E+E +SVL +SLR L+LM+L+VD L++TEIGKAVNGLRKH S +IR L
Subjt:  KVYSSRDDIGEMNCNRVSNFSFGEAEALTDEIEQESQIVGEVLRIKEILNNFEEESDSVLFESLRRLELMALSVDTLRATEIGKAVNGLRKHGSKRIRHL

Query:  ARVLIMEWKEMVDVWVKATAAVQGAEVTPDSKNKSAAVKEEDDYEEEEGLPSPPLDEAAFFTTQPTSMELSQFFDGMDDDGNPRNSGDFVKNRNNVRKTS
        A+ LI EWKE+VD WV  T  + GAE TP+S N S         +EEE  PS P D    FT +P   E+S FFD +D DGNPRNS +   +R + R+  
Subjt:  ARVLIMEWKEMVDVWVKATAAVQGAEVTPDSKNKSAAVKEEDDYEEEEGLPSPPLDEAAFFTTQPTSMELSQFFDGMDDDGNPRNSGDFVKNRNNVRKTS

Query:  NGNQNPMRCNQQTAQEVNVLAKENKTQMKEQ--VVKPNKPSSNTN-SGLLRPQKLSTEQKDNHEKFQ-RKLDKPTIPKR------------NQQDNFKCS
        N  +                 K   TQM+ Q    +  KPSS T+  G  RP K STEQ+  +E     K +KP I ++             QQ+  K  
Subjt:  NGNQNPMRCNQQTAQEVNVLAKENKTQMKEQ--VVKPNKPSSNTN-SGLLRPQKLSTEQKDNHEKFQ-RKLDKPTIPKR------------NQQDNFKCS

Query:  DEVAVQVKLEATKRKLQESYQQAENAKKQRTIQVMELHDLPKQGLGHRNPHLKSGGYNRHWANGRR
        D      K E  KRKLQESYQ  ENAKKQRTIQV+E+  +PKQG   +    + G  NR+WANGR+
Subjt:  DEVAVQVKLEATKRKLQESYQQAENAKKQRTIQVMELHDLPKQGLGHRNPHLKSGGYNRHWANGRR

AT5G09850.1 Transcription elongation factor (TFIIS) family protein3.3e-2227.39Show/hide
Query:  LDSWRNYFRNANSDIFGIIDYAILVAASDCPKEFRLRRDRIAEQLFSCRL-TRCLGCD-----RVELAVAGDIDGDDGETGFKSDFAGDGCEFEAGGSKE
        LD +R+   NA  D++  ID AILVA+ D  +E + RRD I E+L++  +  +C  CD      V  A  G ++             G   E      +E
Subjt:  LDSWRNYFRNANSDIFGIIDYAILVAASDCPKEFRLRRDRIAEQLFSCRL-TRCLGCD-----RVELAVAGDIDGDDGETGFKSDFAGDGCEFEAGGSKE

Query:  SKVYSSRDDIGEMNCNRVSNFSFGEAEALTDEIEQESQIVGEVLRIKEILNNFEEESDSVLFESLRRLELMALSVDTLRATEIGKAVNGLRKHGSKRIRH
            ++ +++ E + N   +  F     L D+ EQ+S     ++ IKE L +  + S+  L E L+ LE M ++   L+ T+IG+ VN +RKH S  +R 
Subjt:  SKVYSSRDDIGEMNCNRVSNFSFGEAEALTDEIEQESQIVGEVLRIKEILNNFEEESDSVLFESLRRLELMALSVDTLRATEIGKAVNGLRKHGSKRIRH

Query:  LARVLIMEWKEMVDVWVKATAAVQGAEVTPDSKNKSAAVKEEDDYEEEEGLPSPPLDEAAFFTTQPTSMELSQFFDGMDDDGNPRNSGDFVKNRNNVRKT
        LA+ L+ +WKE VD WVK     Q  ++ P S      + +ED           P+ +A                     +G+ +   DF          
Subjt:  LARVLIMEWKEMVDVWVKATAAVQGAEVTPDSKNKSAAVKEEDDYEEEEGLPSPPLDEAAFFTTQPTSMELSQFFDGMDDDGNPRNSGDFVKNRNNVRKT

Query:  SNGNQNPMRCNQQTAQEVNVLAKENKTQMKEQVVKPNKPSSNTNSGLLRPQKLSTEQKDNHEKFQRKLDKPTIPKRNQQDNFKCSDEVAVQVKLEATKRK
             +P+  N  ++   N    E + + +    +P + S +      +P + S  Q+             TIP+          D+   +V  +  +++
Subjt:  SNGNQNPMRCNQQTAQEVNVLAKENKTQMKEQVVKPNKPSSNTNSGLLRPQKLSTEQKDNHEKFQRKLDKPTIPKRNQQDNFKCSDEVAVQVKLEATKRK

Query:  LQESYQQAENAKKQRTIQVMELHDLPKQGLGHRNPHLKSGGYN---RHW
        LQ++Y+QAENAKKQRTIQVM++HD+PK   G   P  + GG +   RHW
Subjt:  LQESYQQAENAKKQRTIQVMELHDLPKQGLGHRNPHLKSGGYN---RHW


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGCTAAGTCTGGGTCGCTGGATTCCTGGAGGAATTACTTCCGGAATGCGAATTCTGATATTTTTGGCATAATCGATTACGCAATCTTGGTGGCGGCTTCCGATTG
TCCTAAGGAGTTCAGGTTGAGGAGAGATCGAATTGCGGAGCAGTTGTTCTCTTGCCGATTGACTCGTTGTTTGGGCTGCGACCGAGTGGAGCTGGCGGTGGCCGGAGACA
TCGACGGCGACGACGGTGAAACGGGTTTCAAGAGCGATTTCGCCGGAGATGGGTGTGAGTTTGAGGCTGGTGGGAGCAAAGAGAGCAAGGTTTATAGTAGTAGAGATGAT
ATAGGGGAGATGAATTGTAACCGGGTTAGTAATTTTAGCTTTGGTGAAGCTGAAGCATTGACTGATGAAATTGAACAAGAATCTCAAATTGTTGGGGAGGTTTTGAGGAT
CAAAGAGATTCTTAATAATTTTGAAGAAGAGTCTGATTCAGTGTTGTTTGAATCACTTAGAAGACTTGAATTGATGGCTCTATCAGTTGATACTCTGCGGGCAACTGAGA
TTGGCAAAGCTGTTAATGGCCTTCGAAAGCATGGATCGAAGCGCATCCGTCATCTTGCTCGAGTTCTTATCATGGAGTGGAAAGAAATGGTGGACGTGTGGGTAAAAGCT
ACTGCTGCTGTTCAAGGTGCAGAAGTCACACCAGATTCCAAAAACAAGTCTGCTGCAGTAAAAGAAGAAGATGATTATGAAGAAGAAGAAGGGCTTCCCTCTCCTCCTTT
AGATGAAGCTGCATTTTTTACCACTCAGCCCACATCTATGGAGCTCTCACAATTCTTTGATGGCATGGACGATGATGGAAATCCTCGAAATAGTGGGGACTTCGTCAAGA
ACCGCAATAATGTGAGAAAAACATCAAATGGCAATCAAAACCCTATGAGGTGTAACCAACAAACCGCTCAAGAGGTCAATGTGCTTGCTAAGGAAAATAAGACTCAAATG
AAGGAACAAGTTGTGAAGCCAAATAAGCCATCCTCAAATACAAATTCTGGCCTTTTGAGGCCACAGAAGCTAAGTACAGAACAGAAGGACAACCACGAGAAGTTCCAGCG
CAAATTGGATAAACCTACAATCCCAAAGAGGAACCAGCAAGATAACTTCAAGTGCTCGGATGAGGTTGCAGTTCAGGTGAAACTAGAAGCTACAAAGAGGAAACTCCAAG
AGAGTTACCAACAAGCTGAAAACGCCAAGAAGCAGCGTACGATACAGGTTATGGAATTACACGATCTTCCCAAGCAAGGACTCGGCCACAGAAATCCACACCTAAAATCT
GGAGGCTACAACCGGCATTGGGCAAATGGGCGGCGTTAG
mRNA sequenceShow/hide mRNA sequence
AAAGAAGAGAGAGAGAGGGAGAGAAGTTTTTTGTGGATTTGGTGCCAAAAAAGAAAGAAAGAAAGAAAGAAAACAAACATATTTGTGAATGTTGAAGGGAGGATTTTTGG
TTTGAGAACCCCAAATTCTGTGTCCTTTTTGCAGCACCCAGTTTGATTCTAATCTCTTAATTTCTAGAGAGAGAAACCAAACAAACAAACAAAAAAAATACCCATTCCCT
CATTTCCAATTTCCAAATCCATTCTCATTTCTTCCATTGAAAGAGAGAGAGAGAGAGAGAGAGATTGAAAGATTGAATTCTTGTTCATATTTTCCCCTCTTTCTTTTTCT
CTTCTATTCTCTTCTATTTTCATTTCCCATATTCCCGATATTTCTCCTCCCAGGAAATCCCGGAGCTTTTCCGGGATTGAAGAAAAGCAACCAAGTTTCTCTCTTACTAC
CTTTTCAATTTTTGAACAATCCCATAAAGTAGAACTTGGGTTTTGATCAATACCTTGTTTTGTTCTTGATCCGATCCTTAATTTTCAAAAAATTAACGAAATCGAACACC
ATTACTTACTCTGCACACATTAACCAACTCATTTTTTTGCGTTTAAACGCATGAAACTCCGACTGTTAATGGGTTTGTTGCTAACGATTTTTTCTGGGAATCGGATTCTT
ATGGTACTGGATTAGTGTTAGATAGAGGGGTTTTCTATTTCGGGTGTTGATTTCTTTCAAAACCCACCTTCAATCAACCGGGTTCAACCCCAATTGCTGTGTTTTCTTCC
TATTTAGGTTTTCGTTTTCGACGATGGAATTCCCACTTCGATTCTGAGTGTTTTGTTTGAATTTCATCTGGGTTTGATCGAGGTTGGTTTCTCCAGATTCCGATCATGGC
TGCTAAGTCTGGGTCGCTGGATTCCTGGAGGAATTACTTCCGGAATGCGAATTCTGATATTTTTGGCATAATCGATTACGCAATCTTGGTGGCGGCTTCCGATTGTCCTA
AGGAGTTCAGGTTGAGGAGAGATCGAATTGCGGAGCAGTTGTTCTCTTGCCGATTGACTCGTTGTTTGGGCTGCGACCGAGTGGAGCTGGCGGTGGCCGGAGACATCGAC
GGCGACGACGGTGAAACGGGTTTCAAGAGCGATTTCGCCGGAGATGGGTGTGAGTTTGAGGCTGGTGGGAGCAAAGAGAGCAAGGTTTATAGTAGTAGAGATGATATAGG
GGAGATGAATTGTAACCGGGTTAGTAATTTTAGCTTTGGTGAAGCTGAAGCATTGACTGATGAAATTGAACAAGAATCTCAAATTGTTGGGGAGGTTTTGAGGATCAAAG
AGATTCTTAATAATTTTGAAGAAGAGTCTGATTCAGTGTTGTTTGAATCACTTAGAAGACTTGAATTGATGGCTCTATCAGTTGATACTCTGCGGGCAACTGAGATTGGC
AAAGCTGTTAATGGCCTTCGAAAGCATGGATCGAAGCGCATCCGTCATCTTGCTCGAGTTCTTATCATGGAGTGGAAAGAAATGGTGGACGTGTGGGTAAAAGCTACTGC
TGCTGTTCAAGGTGCAGAAGTCACACCAGATTCCAAAAACAAGTCTGCTGCAGTAAAAGAAGAAGATGATTATGAAGAAGAAGAAGGGCTTCCCTCTCCTCCTTTAGATG
AAGCTGCATTTTTTACCACTCAGCCCACATCTATGGAGCTCTCACAATTCTTTGATGGCATGGACGATGATGGAAATCCTCGAAATAGTGGGGACTTCGTCAAGAACCGC
AATAATGTGAGAAAAACATCAAATGGCAATCAAAACCCTATGAGGTGTAACCAACAAACCGCTCAAGAGGTCAATGTGCTTGCTAAGGAAAATAAGACTCAAATGAAGGA
ACAAGTTGTGAAGCCAAATAAGCCATCCTCAAATACAAATTCTGGCCTTTTGAGGCCACAGAAGCTAAGTACAGAACAGAAGGACAACCACGAGAAGTTCCAGCGCAAAT
TGGATAAACCTACAATCCCAAAGAGGAACCAGCAAGATAACTTCAAGTGCTCGGATGAGGTTGCAGTTCAGGTGAAACTAGAAGCTACAAAGAGGAAACTCCAAGAGAGT
TACCAACAAGCTGAAAACGCCAAGAAGCAGCGTACGATACAGGTTATGGAATTACACGATCTTCCCAAGCAAGGACTCGGCCACAGAAATCCACACCTAAAATCTGGAGG
CTACAACCGGCATTGGGCAAATGGGCGGCGTTAGGATCGCCAATAATAATAAGGTAGAAGACTAATGCTTCCAGCATACTGTCCAGGTGACTTCCATCCAGAATCAGGTG
GAAGATCATGCTAAAGCTCCCTGGCAAACAGTGTCTTGACTGACTCACTTAAAGGTAAACAACAAAAACCTTGGTTTCAGTCTGTTGTGCCAGAGAAGGCGATTCCGATT
CAAAGGAGAGTTGGAATTTAAAAAAAAAAAAAAAAACATTTCCTACTTTATAGAGAATTTCTAATGGAATTTGGGAGGCAAATTCTATAGCTTTATCAGTAGTTGTTCTG
GGAGTTTTGACTTGGTTGGTTATCTCTTACATAATGACTGTGTATAGAACCCCTCATTTGATATCCTCTTCACTTCACTGACCAGTGACTACTTCTTATAGACAGTTTCC
CCCTTCTTACATTCAAGGAAGGCTTCCTTCCATACTATGAGATAAATGATAATGTAAGATAATTTGCACAAAAACTAGGTGCAGTCCCATAAACAGTATAAAGTAATCTG
TATACTCCTTCATATGAATGGTAATAATTGTACTCACAATTTTTAGCTTTTGTTCTCATGGAATGATAGCC
Protein sequenceShow/hide protein sequence
MAAKSGSLDSWRNYFRNANSDIFGIIDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRCLGCDRVELAVAGDIDGDDGETGFKSDFAGDGCEFEAGGSKESKVYSSRDD
IGEMNCNRVSNFSFGEAEALTDEIEQESQIVGEVLRIKEILNNFEEESDSVLFESLRRLELMALSVDTLRATEIGKAVNGLRKHGSKRIRHLARVLIMEWKEMVDVWVKA
TAAVQGAEVTPDSKNKSAAVKEEDDYEEEEGLPSPPLDEAAFFTTQPTSMELSQFFDGMDDDGNPRNSGDFVKNRNNVRKTSNGNQNPMRCNQQTAQEVNVLAKENKTQM
KEQVVKPNKPSSNTNSGLLRPQKLSTEQKDNHEKFQRKLDKPTIPKRNQQDNFKCSDEVAVQVKLEATKRKLQESYQQAENAKKQRTIQVMELHDLPKQGLGHRNPHLKS
GGYNRHWANGRR