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CcUC10G201930 (gene) of Watermelon (PI 537277) v1 genome

Gene IDCcUC10G201930
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionUnknown protein
Genome locationCicolChr10:29111842..29116597
RNA-Seq ExpressionCcUC10G201930
SyntenyCcUC10G201930
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CPU65980.1 Uncharacterised protein [Mycobacteroides abscessus]9.8e-0439.17Show/hide
Query:  PVPVMVPPVPIPATNMSRLP-----MALGVLIR----------------------ISSALAIAPWRPFSGSVKTISAPKARSRILLSTFMDAGMVATSLY
        P PVMVPPVP+PAT MS  P     ++  V+ R                      ISSA   AP+ P    V+  SAP ARS    S  + +GMV+T+ Y
Subjt:  PVPVMVPPVPIPATNMSRLP-----MALGVLIR----------------------ISSALAIAPWRPFSGSVKTISAPKARSRILLSTFMDAGMVATSLY

Query:  PFVAAMKAMPSPVLPVVGST
        P  A   A   PVLP V ST
Subjt:  PFVAAMKAMPSPVLPVVGST

CSA52269.1 Uncharacterised protein [Vibrio cholerae]8.5e-0853.52Show/hide
Query:  GVLIRISSALAIAPWRPFSGSVKTISAPKARSRILLSTFMDAGMVATSLYPFVAAMKAMPSPVLPVVGSTN
        G+L  ISSA AIAP+ PF+ SV +  AP A S +  S  +D+GMV  +LYP  AA  A  +PVLP+VGSTN
Subjt:  GVLIRISSALAIAPWRPFSGSVKTISAPKARSRILLSTFMDAGMVATSLYPFVAAMKAMPSPVLPVVGSTN

MBT9162661.1 hypothetical protein [Dehalococcoidia bacterium]2.3e-0540.68Show/hide
Query:  PVMVPPVPIPATNMSRLPMA---------------------------LGVLIRISSALAIAPWRPFSGSVKTISAPKARSRILLSTFMDAGMVATSLYPF
        PV+VPPVP P T +S LP                             LG     SSA  IAP+ P +  V T SAPKA    L S  M +GMV  S YP 
Subjt:  PVMVPPVPIPATNMSRLPMA---------------------------LGVLIRISSALAIAPWRPFSGSVKTISAPKARSRILLSTFMDAGMVATSLYPF

Query:  VAAMKAMPSPVLPVVGST
         A  KA   PVLP+VGST
Subjt:  VAAMKAMPSPVLPVVGST

SUQ48816.1 hypothetical protein CNEONATC25_02719 [Clostridium neonatale]1.2e-0638.21Show/hide
Query:  YQERPVPVMVPPVPIPATNMSRLP---------------------------MALGVLIRISSALAIAPWRPFSGSVKTISAPKARSRILLSTFMDAGMVA
        +   P+PV VPPVP PAT MS  P                           +A       SSA  IAP+ P +  V+TISAP A + +LLS  + +G+V 
Subjt:  YQERPVPVMVPPVPIPATNMSRLP---------------------------MALGVLIRISSALAIAPWRPFSGSVKTISAPKARSRILLSTFMDAGMVA

Query:  TSLYPFVAAMKAMPSPVLPVVGS
         +L P  AA KA P PV P+VGS
Subjt:  TSLYPFVAAMKAMPSPVLPVVGS

VEU38254.1 unnamed protein product [Pseudo-nitzschia multistriata]2.2e-0844.26Show/hide
Query:  PVPVMVPPVPIPATNMSRLP---------------MALGVLIR-----------ISSALAIAPWRPFSGSVKTISAPKARSRILLSTFMDAGMVATSLYP
        P PVMVPPVP P T MS LP                 L  L+            ISSALA+AP  P +  V+T  APKA  R   S  MD+GMV    YP
Subjt:  PVPVMVPPVPIPATNMSRLP---------------MALGVLIR-----------ISSALAIAPWRPFSGSVKTISAPKARSRILLSTFMDAGMVATSLYP

Query:  FVAAMKAMPSPVLPVVGSTNMV
          AA  A P PVLP VGST  V
Subjt:  FVAAMKAMPSPVLPVVGSTNMV

TrEMBL top hitse value%identityAlignment
A0A448Z883 Uncharacterized protein1.1e-0844.26Show/hide
Query:  PVPVMVPPVPIPATNMSRLP---------------MALGVLIR-----------ISSALAIAPWRPFSGSVKTISAPKARSRILLSTFMDAGMVATSLYP
        P PVMVPPVP P T MS LP                 L  L+            ISSALA+AP  P +  V+T  APKA  R   S  MD+GMV    YP
Subjt:  PVPVMVPPVPIPATNMSRLP---------------MALGVLIR-----------ISSALAIAPWRPFSGSVKTISAPKARSRILLSTFMDAGMVATSLYP

Query:  FVAAMKAMPSPVLPVVGSTNMV
          AA  A P PVLP VGST  V
Subjt:  FVAAMKAMPSPVLPVVGSTNMV

A0A645AWG1 Uncharacterized protein7.8e-0756.52Show/hide
Query:  GVLIRISSALAIAPWRPFSGSVKTISAPKARSRILLSTFMDAGMVATSLYPFVAAMKAMPSPVLPVVGS
        GV  R SSALAIAP+ P +  V T  AP A  R+  ST M +G+V  SLYPF A  KA P PVLP+VGS
Subjt:  GVLIRISSALAIAPWRPFSGSVKTISAPKARSRILLSTFMDAGMVATSLYPFVAAMKAMPSPVLPVVGS

A0A650MJV2 Uncharacterized protein6.0e-0738.21Show/hide
Query:  YQERPVPVMVPPVPIPATNMSRLP---------------------------MALGVLIRISSALAIAPWRPFSGSVKTISAPKARSRILLSTFMDAGMVA
        +   P+PV VPPVP PAT MS  P                           +A       SSA  IAP+ P +  V+TISAP A + +LLS  + +G+V 
Subjt:  YQERPVPVMVPPVPIPATNMSRLP---------------------------MALGVLIRISSALAIAPWRPFSGSVKTISAPKARSRILLSTFMDAGMVA

Query:  TSLYPFVAAMKAMPSPVLPVVGS
         +L P  AA KA P PV P+VGS
Subjt:  TSLYPFVAAMKAMPSPVLPVVGS

A0A655QE45 Uncharacterized protein4.1e-0853.52Show/hide
Query:  GVLIRISSALAIAPWRPFSGSVKTISAPKARSRILLSTFMDAGMVATSLYPFVAAMKAMPSPVLPVVGSTN
        G+L  ISSA AIAP+ PF+ SV +  AP A S +  S  +D+GMV  +LYP  AA  A  +PVLP+VGSTN
Subjt:  GVLIRISSALAIAPWRPFSGSVKTISAPKARSRILLSTFMDAGMVATSLYPFVAAMKAMPSPVLPVVGSTN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGGAAGAAGTGTAGAAAAAGAAAGAGAAAGAAGAAAAGAGAAGAGAATGGCATGGAAAAGATGATAATAAGTTTTCCACAAAAAGAATACAAGATTTCCAATGGAGA
AACCATATACAACAAAATACATGACTTCCAATGGAGAGAATGGAATGAACATACCACAATAAGTTTTCCAGCATTTTCAGGCCTCCTTGCCAAACTTATCGCTGCTACTG
CAGCAGCTCCTGATGAAATGCCAACCTACCAAGAGCGACCAGTGCCTGTAATGGTACCACCAGTTCCAATTCCAGCAACAAATATGTCAAGACTACCCATGGCATTAGGA
GTACTAATTAGAATTTCTTCAGCTTTGGCAATAGCCCCTTGGAGGCCTTTTTCTGGGTCTGTCAAAACAATCTCTGCACCAAAAGCACGTAGTAGGATCCTCCTTTCAAC
ATTTATGGATGCAGGCATGGTGGCTACAAGTTTGTACCCTTTTGTTGCAGCAATGAAAGCTATGCCAAGTCCCGTATTGCCAGTTGTTGGTTCAACTAATATGGTCTGA
mRNA sequenceShow/hide mRNA sequence
ATGAGGAAGAAGTGTAGAAAAAGAAAGAGAAAGAAGAAAAGAGAAGAGAATGGCATGGAAAAGATGATAATAAGTTTTCCACAAAAAGAATACAAGATTTCCAATGGAGA
AACCATATACAACAAAATACATGACTTCCAATGGAGAGAATGGAATGAACATACCACAATAAGTTTTCCAGCATTTTCAGGCCTCCTTGCCAAACTTATCGCTGCTACTG
CAGCAGCTCCTGATGAAATGCCAACCTACCAAGAGCGACCAGTGCCTGTAATGGTACCACCAGTTCCAATTCCAGCAACAAATATGTCAAGACTACCCATGGCATTAGGA
GTACTAATTAGAATTTCTTCAGCTTTGGCAATAGCCCCTTGGAGGCCTTTTTCTGGGTCTGTCAAAACAATCTCTGCACCAAAAGCACGTAGTAGGATCCTCCTTTCAAC
ATTTATGGATGCAGGCATGGTGGCTACAAGTTTGTACCCTTTTGTTGCAGCAATGAAAGCTATGCCAAGTCCCGTATTGCCAGTTGTTGGTTCAACTAATATGGTCTGA
Protein sequenceShow/hide protein sequence
MRKKCRKRKRKKKREENGMEKMIISFPQKEYKISNGETIYNKIHDFQWREWNEHTTISFPAFSGLLAKLIAATAAAPDEMPTYQERPVPVMVPPVPIPATNMSRLPMALG
VLIRISSALAIAPWRPFSGSVKTISAPKARSRILLSTFMDAGMVATSLYPFVAAMKAMPSPVLPVVGSTNMV