; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CcUC10G202170 (gene) of Watermelon (PI 537277) v1 genome

Gene IDCcUC10G202170
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
Descriptionribosome production factor 1-like
Genome locationCicolChr10:29291923..29296193
RNA-Seq ExpressionCcUC10G202170
SyntenyCcUC10G202170
Gene Ontology termsGO:0000460 - maturation of 5.8S rRNA (biological process)
GO:0000470 - maturation of LSU-rRNA (biological process)
GO:0005730 - nucleolus (cellular component)
GO:0030687 - preribosome, large subunit precursor (cellular component)
GO:0042134 - rRNA primary transcript binding (molecular function)
InterPro domainsIPR007109 - Brix domain
IPR044281 - U3 snoRNP protein/Ribosome production factor 1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008443155.1 PREDICTED: ribosome production factor 1 isoform X1 [Cucumis melo]3.8e-17996.99Show/hide
Query:  MGEEKKDKGIIPSMIKNKEKRAEVHANLKNQKKLEKRKRAKARDAAEKQALELGEELPPRKIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRN
        MGEEKK+KGIIPSMIKNKEKRAEVHANLK+QKKLEKRKRAKARDAAEKQALELGEELPPRKIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKR+
Subjt:  MGEEKKDKGIIPSMIKNKEKRAEVHANLKNQKKLEKRKRAKARDAAEKQALELGEELPPRKIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRN

Query:  ILPKVLITTCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEYANAEDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNPT
        ILPKVLITTCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEYANA+DFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNPT
Subjt:  ILPKVLITTCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEYANAEDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNPT

Query:  SHQPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVATFHNQRDFIFFRHHRYIFESKENKKESDSKNKSKDTKGEKVLQQKVVARLQECGPRFTMKL
         HQPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRV TFHNQRDFIFFRHHRYIFESKENKKE+DSK KSKDTKGEKV QQKV+ARLQECGPRFTMKL
Subjt:  SHQPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVATFHNQRDFIFFRHHRYIFESKENKKESDSKNKSKDTKGEKVLQQKVVARLQECGPRFTMKL

Query:  ISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL
        ISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL
Subjt:  ISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL

XP_022155906.1 ribosome production factor 1-like [Momordica charantia]1.3e-17193.09Show/hide
Query:  MGEEKKDK-GIIPSMIKNKEKRAEVHANLKNQKKLEKRKRAKARDAAEKQALELGEELPPRKIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKR
        MGEEKK+K  IIPSMIKNKEKR EVHANLK QKKLEKRKRAKARDA+EKQALELGEE PPR IPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKR
Subjt:  MGEEKKDK-GIIPSMIKNKEKRAEVHANLKNQKKLEKRKRAKARDAAEKQALELGEELPPRKIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKR

Query:  NILPKVLITTCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEYANAEDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNP
        + LPKVLITTCRFNS+IGP+FISELLSVIPNAHYYKRGTNDLKKIIEYANA+DFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNP
Subjt:  NILPKVLITTCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEYANAEDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNP

Query:  TSHQPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVATFHNQRDFIFFRHHRYIFESKENKKESDSKNKSKDTKGEKVLQQKVVARLQECGPRFTMK
        TSH+PELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRV TFHNQRDF+FFRHHRYIF+SKENKKE+DSK+ SKD KGEKV QQKV+ARLQECGPRFTMK
Subjt:  TSHQPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVATFHNQRDFIFFRHHRYIFESKENKKESDSKNKSKDTKGEKVLQQKVVARLQECGPRFTMK

Query:  LISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL
        LISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL
Subjt:  LISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL

XP_022156150.1 ribosome production factor 1-like [Momordica charantia]1.0e-17193.39Show/hide
Query:  MGEEKKDK-GIIPSMIKNKEKRAEVHANLKNQKKLEKRKRAKARDAAEKQALELGEELPPRKIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKR
        MGEEKK+K  IIPSMIKNKEKR EVHANLK QKKLEKRKRAKARDA+EKQALELGEE PPR IPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKR
Subjt:  MGEEKKDK-GIIPSMIKNKEKRAEVHANLKNQKKLEKRKRAKARDAAEKQALELGEELPPRKIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKR

Query:  NILPKVLITTCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEYANAEDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNP
        + LPKVLITTCRFNSTIGP+FISELLSVIPNAHYYKRGTNDLKKIIEYANA+DFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNP
Subjt:  NILPKVLITTCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEYANAEDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNP

Query:  TSHQPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVATFHNQRDFIFFRHHRYIFESKENKKESDSKNKSKDTKGEKVLQQKVVARLQECGPRFTMK
        TSH+PELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRV TFHNQRDFIFFRHHRYIF+SKENKKE+DSK+ SKD KGEKV +QKV+ARLQECGPRFTMK
Subjt:  TSHQPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVATFHNQRDFIFFRHHRYIFESKENKKESDSKNKSKDTKGEKVLQQKVVARLQECGPRFTMK

Query:  LISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL
        LISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL
Subjt:  LISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL

XP_031737500.1 ribosome production factor 1 [Cucumis sativus]8.7e-17694.88Show/hide
Query:  MGEEKKDKGIIPSMIKNKEKRAEVHANLKNQKKLEKRKRAKARDAAEKQALELGEELPPRKIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRN
        MGEEKK+K I+PS IKNKEKRAEVHANLK+QKKLEKRKRAKARDAAEKQALELGEELPPRKIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKR+
Subjt:  MGEEKKDKGIIPSMIKNKEKRAEVHANLKNQKKLEKRKRAKARDAAEKQALELGEELPPRKIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRN

Query:  ILPKVLITTCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEYANAEDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNPT
        ILPK+LITTCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKI+EYANA+DFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRK+IKNHGNPT
Subjt:  ILPKVLITTCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEYANAEDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNPT

Query:  SHQPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVATFHNQRDFIFFRHHRYIFESKENKKESDSKNKSKDTKGEKVLQQKVVARLQECGPRFTMKL
         HQPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRV TFHNQRDFIFFRHHRYIFESKENKKE+DSK KSK TKGEKV QQKV+ARLQECGPRFTMKL
Subjt:  SHQPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVATFHNQRDFIFFRHHRYIFESKENKKESDSKNKSKDTKGEKVLQQKVVARLQECGPRFTMKL

Query:  ISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL
        ISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL
Subjt:  ISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL

XP_038906205.1 ribosome production factor 1 [Benincasa hispida]7.1e-17895.78Show/hide
Query:  MGEEKKDKGIIPSMIKNKEKRAEVHANLKNQKKLEKRKRAKARDAAEKQALELGEELPPRKIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRN
        MGEE K++GIIPSMIKNKEKRAEVHANLKNQKKLEKRKRAKARDAAEKQALELGEELPPRKIPRTIENTREVDET+CKPDDEELFAGNDADEFSSIIKR 
Subjt:  MGEEKKDKGIIPSMIKNKEKRAEVHANLKNQKKLEKRKRAKARDAAEKQALELGEELPPRKIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRN

Query:  ILPKVLITTCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEYANAEDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNPT
        ILPKVLITTCRFNSTIGP FISELLSVIPNAHYYKRGTNDLKKIIEYANA+DFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNPT
Subjt:  ILPKVLITTCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEYANAEDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNPT

Query:  SHQPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVATFHNQRDFIFFRHHRYIFESKENKKESDSKNKSKDTKGEKVLQQKVVARLQECGPRFTMKL
        SHQPELVLTNFTTRLGLR+GRLIQ+LFPQDPNFRGRRV TFHNQRDFIFFRHHRYIFESKENKKE+DSK KSKDTKGEKV QQKV+ARLQECGPRFTMKL
Subjt:  SHQPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVATFHNQRDFIFFRHHRYIFESKENKKESDSKNKSKDTKGEKVLQQKVVARLQECGPRFTMKL

Query:  ISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL
        ISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL
Subjt:  ISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL

TrEMBL top hitse value%identityAlignment
A0A0A0LH42 Brix domain-containing protein4.2e-17694.88Show/hide
Query:  MGEEKKDKGIIPSMIKNKEKRAEVHANLKNQKKLEKRKRAKARDAAEKQALELGEELPPRKIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRN
        MGEEKK+K I+PS IKNKEKRAEVHANLK+QKKLEKRKRAKARDAAEKQALELGEELPPRKIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKR+
Subjt:  MGEEKKDKGIIPSMIKNKEKRAEVHANLKNQKKLEKRKRAKARDAAEKQALELGEELPPRKIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRN

Query:  ILPKVLITTCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEYANAEDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNPT
        ILPK+LITTCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKI+EYANA+DFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRK+IKNHGNPT
Subjt:  ILPKVLITTCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEYANAEDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNPT

Query:  SHQPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVATFHNQRDFIFFRHHRYIFESKENKKESDSKNKSKDTKGEKVLQQKVVARLQECGPRFTMKL
         HQPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRV TFHNQRDFIFFRHHRYIFESKENKKE+DSK KSK TKGEKV QQKV+ARLQECGPRFTMKL
Subjt:  SHQPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVATFHNQRDFIFFRHHRYIFESKENKKESDSKNKSKDTKGEKVLQQKVVARLQECGPRFTMKL

Query:  ISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL
        ISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL
Subjt:  ISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL

A0A1S3B854 ribosome production factor 1 isoform X11.8e-17996.99Show/hide
Query:  MGEEKKDKGIIPSMIKNKEKRAEVHANLKNQKKLEKRKRAKARDAAEKQALELGEELPPRKIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRN
        MGEEKK+KGIIPSMIKNKEKRAEVHANLK+QKKLEKRKRAKARDAAEKQALELGEELPPRKIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKR+
Subjt:  MGEEKKDKGIIPSMIKNKEKRAEVHANLKNQKKLEKRKRAKARDAAEKQALELGEELPPRKIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRN

Query:  ILPKVLITTCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEYANAEDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNPT
        ILPKVLITTCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEYANA+DFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNPT
Subjt:  ILPKVLITTCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEYANAEDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNPT

Query:  SHQPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVATFHNQRDFIFFRHHRYIFESKENKKESDSKNKSKDTKGEKVLQQKVVARLQECGPRFTMKL
         HQPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRV TFHNQRDFIFFRHHRYIFESKENKKE+DSK KSKDTKGEKV QQKV+ARLQECGPRFTMKL
Subjt:  SHQPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVATFHNQRDFIFFRHHRYIFESKENKKESDSKNKSKDTKGEKVLQQKVVARLQECGPRFTMKL

Query:  ISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL
        ISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL
Subjt:  ISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL

A0A5A7UHC7 Ribosome production factor 1 isoform X11.8e-17996.99Show/hide
Query:  MGEEKKDKGIIPSMIKNKEKRAEVHANLKNQKKLEKRKRAKARDAAEKQALELGEELPPRKIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRN
        MGEEKK+KGIIPSMIKNKEKRAEVHANLK+QKKLEKRKRAKARDAAEKQALELGEELPPRKIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKR+
Subjt:  MGEEKKDKGIIPSMIKNKEKRAEVHANLKNQKKLEKRKRAKARDAAEKQALELGEELPPRKIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRN

Query:  ILPKVLITTCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEYANAEDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNPT
        ILPKVLITTCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEYANA+DFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNPT
Subjt:  ILPKVLITTCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEYANAEDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNPT

Query:  SHQPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVATFHNQRDFIFFRHHRYIFESKENKKESDSKNKSKDTKGEKVLQQKVVARLQECGPRFTMKL
         HQPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRV TFHNQRDFIFFRHHRYIFESKENKKE+DSK KSKDTKGEKV QQKV+ARLQECGPRFTMKL
Subjt:  SHQPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVATFHNQRDFIFFRHHRYIFESKENKKESDSKNKSKDTKGEKVLQQKVVARLQECGPRFTMKL

Query:  ISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL
        ISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL
Subjt:  ISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL

A0A6J1DPH5 ribosome production factor 1-like4.8e-17293.39Show/hide
Query:  MGEEKKDK-GIIPSMIKNKEKRAEVHANLKNQKKLEKRKRAKARDAAEKQALELGEELPPRKIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKR
        MGEEKK+K  IIPSMIKNKEKR EVHANLK QKKLEKRKRAKARDA+EKQALELGEE PPR IPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKR
Subjt:  MGEEKKDK-GIIPSMIKNKEKRAEVHANLKNQKKLEKRKRAKARDAAEKQALELGEELPPRKIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKR

Query:  NILPKVLITTCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEYANAEDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNP
        + LPKVLITTCRFNSTIGP+FISELLSVIPNAHYYKRGTNDLKKIIEYANA+DFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNP
Subjt:  NILPKVLITTCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEYANAEDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNP

Query:  TSHQPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVATFHNQRDFIFFRHHRYIFESKENKKESDSKNKSKDTKGEKVLQQKVVARLQECGPRFTMK
        TSH+PELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRV TFHNQRDFIFFRHHRYIF+SKENKKE+DSK+ SKD KGEKV +QKV+ARLQECGPRFTMK
Subjt:  TSHQPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVATFHNQRDFIFFRHHRYIFESKENKKESDSKNKSKDTKGEKVLQQKVVARLQECGPRFTMK

Query:  LISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL
        LISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL
Subjt:  LISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL

A0A6J1DT48 ribosome production factor 1-like6.3e-17293.09Show/hide
Query:  MGEEKKDK-GIIPSMIKNKEKRAEVHANLKNQKKLEKRKRAKARDAAEKQALELGEELPPRKIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKR
        MGEEKK+K  IIPSMIKNKEKR EVHANLK QKKLEKRKRAKARDA+EKQALELGEE PPR IPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKR
Subjt:  MGEEKKDK-GIIPSMIKNKEKRAEVHANLKNQKKLEKRKRAKARDAAEKQALELGEELPPRKIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKR

Query:  NILPKVLITTCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEYANAEDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNP
        + LPKVLITTCRFNS+IGP+FISELLSVIPNAHYYKRGTNDLKKIIEYANA+DFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNP
Subjt:  NILPKVLITTCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEYANAEDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNP

Query:  TSHQPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVATFHNQRDFIFFRHHRYIFESKENKKESDSKNKSKDTKGEKVLQQKVVARLQECGPRFTMK
        TSH+PELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRV TFHNQRDF+FFRHHRYIF+SKENKKE+DSK+ SKD KGEKV QQKV+ARLQECGPRFTMK
Subjt:  TSHQPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVATFHNQRDFIFFRHHRYIFESKENKKESDSKNKSKDTKGEKVLQQKVVARLQECGPRFTMK

Query:  LISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL
        LISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL
Subjt:  LISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL

SwissProt top hitse value%identityAlignment
Q5R631 Ribosome production factor 18.4e-7347.55Show/hide
Query:  GIIPSMIKNKEKRAEVHANLKNQKKLEKRKRAKARDAAEKQALELGEELPPRKIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRNILPKVLIT
        G   S IKNKE+R   H      K+ +++++  A+   +K+   LG++ PP+ +P+TI+N R  DET   P+DEE+      DEF+S   +   PK+LIT
Subjt:  GIIPSMIKNKEKRAEVHANLKNQKKLEKRKRAKARDAAEKQALELGEELPPRKIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRNILPKVLIT

Query:  TCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEYANAEDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHG-NPTSHQPELV
        T             +L +VIPN+H Y R    LKKII    A DFT L+V++  R+  +GL++  LP GPTAHFK+S+V LRK+IK  G +PT H PE++
Subjt:  TCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEYANAEDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHG-NPTSHQPELV

Query:  LTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVATFHNQRDFIFFRHHRYIFESKENKKESDSKNKSKDTKGEKVLQQKVVARLQECGPRFTMKLISLQHGT
        L NFTTRLG  +GR+  SLFP +P F GR+VATFHNQRD+IFFR HRYIF S++                           +QE GPRFT+KL SLQ GT
Subjt:  LTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVATFHNQRDFIFFRHHRYIFESKENKKESDSKNKSKDTKGEKVLQQKVVARLQECGPRFTMKLISLQHGT

Query:  FDSKGGEYEWVHKP-EMDTSRRRFFL
        FDSK GEYEWVHKP EMDTSRR+F L
Subjt:  FDSKGGEYEWVHKP-EMDTSRRRFFL

Q6IQU6 Ribosome production factor 17.1e-7249.07Show/hide
Query:  SMIKNKEKRAEVHANLKNQKKLEKRKRAKARDAAEKQALELGEELPPRKIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRNILPKVLITTCRF
        S IKNK++R  +   LK +K+ +KR   K +   E++AL+  ++ PP+++P+TIEN R  DET   P+DEE+      DEFS+   R   PKVLITT   
Subjt:  SMIKNKEKRAEVHANLKNQKKLEKRKRAKARDAAEKQALELGEELPPRKIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRNILPKVLITTCRF

Query:  NSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEYANAEDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHG-NPTSHQPELVLTNF
               F  +L +VIP+A+ Y R    LKK+I    +  FT LMV++  R+  +G+++  LP+GPTAHFK+S+V LRK++K  G NPT H PE++L NF
Subjt:  NSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEYANAEDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHG-NPTSHQPELVLTNF

Query:  TTRLGLRVGRLIQSLFPQDPNFRGRRVATFHNQRDFIFFRHHRYIFESKENKKESDSKNKSKDTKGEKVLQQKVVARLQECGPRFTMKLISLQHGTFDSK
        TTRLG  +GRL  +LFP DP F GR+VATFHNQRDFIFFR HRYIF           KN+ K               +QE GPRFT+KL SLQ GTFDSK
Subjt:  TTRLGLRVGRLIQSLFPQDPNFRGRRVATFHNQRDFIFFRHHRYIFESKENKKESDSKNKSKDTKGEKVLQQKVVARLQECGPRFTMKLISLQHGTFDSK

Query:  GGEYEWVHK-PEMDTSRRRFFL
         GEYEWVHK  EMD+SRR+F L
Subjt:  GGEYEWVHK-PEMDTSRRRFFL

Q7TND5 Ribosome production factor 11.9e-7247.24Show/hide
Query:  GIIPSMIKNKEKRAEVHANLKNQKKLEKRKRAKARDAAEKQALELGEELPPRKIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRNILPKVLIT
        G   S IKNK++R   H      K+ +++++  A+   +K+   LG++ PP+ +P+TI+N R  DET   P+DEE+      DEF+S   R   PK+LIT
Subjt:  GIIPSMIKNKEKRAEVHANLKNQKKLEKRKRAKARDAAEKQALELGEELPPRKIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRNILPKVLIT

Query:  TCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEYANAEDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHG-NPTSHQPELV
        T             +L +VIP++H Y R    LKKII    A DFT L+V++  R+  +GL++  LP GPTAHFK+S+V LRK+IK  G +PT H PE++
Subjt:  TCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEYANAEDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHG-NPTSHQPELV

Query:  LTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVATFHNQRDFIFFRHHRYIFESKENKKESDSKNKSKDTKGEKVLQQKVVARLQECGPRFTMKLISLQHGT
        L NFTTRLG  +GR+  SLFP +P F GR+VATFHNQRD+IFFR HRYIF+S++                           +QE GPRFT+KL SLQ GT
Subjt:  LTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVATFHNQRDFIFFRHHRYIFESKENKKESDSKNKSKDTKGEKVLQQKVVARLQECGPRFTMKLISLQHGT

Query:  FDSKGGEYEWVHKP-EMDTSRRRFFL
        FDSK GEYEWVHKP EMDTSRR+F L
Subjt:  FDSKGGEYEWVHKP-EMDTSRRRFFL

Q8AVP1 Ribosome production factor 13.8e-7347.85Show/hide
Query:  SMIKNKEKRAEVHANLKNQKKLEK----RKRAKARDAAEKQALELGEELPPRKIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRNILPKVLIT
        S IKNK++R  +   LK +K+ EK    +KR K R+A       LG++ PP+ +P+TIEN R  DET   P DEE+      DEF+    +   PK+LIT
Subjt:  SMIKNKEKRAEVHANLKNQKKLEK----RKRAKARDAAEKQALELGEELPPRKIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRNILPKVLIT

Query:  TCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEYANAEDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHG-NPTSHQPELV
        T          F  +L S+IPN+  Y R    LKKII    + D+T L+V++  R+  +GL++  LP+GPTAHFKISNV LRK++K  G  PT H+PE++
Subjt:  TCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEYANAEDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHG-NPTSHQPELV

Query:  LTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVATFHNQRDFIFFRHHRYIFESKENKKESDSKNKSKDTKGEKVLQQKVVARLQECGPRFTMKLISLQHGT
        L NFTTRLG  +GR+  SL+P DP+F GR+VATFHNQRD+IFFR+HRY+F+S++                           +QE GPRFT+KL SLQ GT
Subjt:  LTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVATFHNQRDFIFFRHHRYIFESKENKKESDSKNKSKDTKGEKVLQQKVVARLQECGPRFTMKLISLQHGT

Query:  FDSKGGEYEWVHK-PEMDTSRRRFFL
        FDSK GEYEWVHK  EMDTSRR+F L
Subjt:  FDSKGGEYEWVHK-PEMDTSRRRFFL

Q9H9Y2 Ribosome production factor 11.9e-7247.24Show/hide
Query:  GIIPSMIKNKEKRAEVHANLKNQKKLEKRKRAKARDAAEKQALELGEELPPRKIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRNILPKVLIT
        G   S IKNK++R   H      K+ +++++  A+   +K+   LG++ PP+ +P+TI+N R  DET   P+DEE+      DEF+S   +   PK+LIT
Subjt:  GIIPSMIKNKEKRAEVHANLKNQKKLEKRKRAKARDAAEKQALELGEELPPRKIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRNILPKVLIT

Query:  TCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEYANAEDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHG-NPTSHQPELV
        T             +L +VIPN+H Y R    LKKII    A DFT L+V++  R+  +GL++  LP GPTAHFK+S+V LRK+IK  G +PT H PE++
Subjt:  TCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEYANAEDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHG-NPTSHQPELV

Query:  LTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVATFHNQRDFIFFRHHRYIFESKENKKESDSKNKSKDTKGEKVLQQKVVARLQECGPRFTMKLISLQHGT
        L NFTTRLG  +GR+  SLFP +P F GR+VATFHNQRD+IFFR HRYIF S++                           +QE GPRFT+KL SLQ GT
Subjt:  LTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVATFHNQRDFIFFRHHRYIFESKENKKESDSKNKSKDTKGEKVLQQKVVARLQECGPRFTMKLISLQHGT

Query:  FDSKGGEYEWVHKP-EMDTSRRRFFL
        FDSK GEYEWVHKP EMDTSRR+F L
Subjt:  FDSKGGEYEWVHKP-EMDTSRRRFFL

Arabidopsis top hitse value%identityAlignment
AT1G63780.1 Ribosomal RNA processing Brix domain protein3.4e-3734.03Show/hide
Query:  KQALELGEELPPRKIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRNILPKVLITTCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEY
        ++AL+ G+ +P        +  +E+D    +  +  +   +  DE+++  + +  PK+L+TT R  S     F  EL  V PN+    RG+  + +IIE 
Subjt:  KQALELGEELPPRKIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRNILPKVLITTCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEY

Query:  ANAEDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDI---KNHGNPTSHQPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVATFHNQ
        A + DFT +++VH  R   DGL+I  LP GPTA+F + NVV R DI   K+ G      P L+  NFTT++G RVG +++ +FP  P    +R+ TF NQ
Subjt:  ANAEDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDI---KNHGNPTSHQPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVATFHNQ

Query:  RDFIFFRHHRYIFESKENKKESDSKNKSKDTKGEKVLQQKVVARLQECGPRFTMKLISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL
         D+I FR+H Y                 K   G K ++      L+E GPRF ++L  ++ GT +    E EWV +P M+TS++R F+
Subjt:  RDFIFFRHHRYIFESKENKKESDSKNKSKDTKGEKVLQQKVVARLQECGPRFTMKLISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL

AT4G01560.1 Ribosomal RNA processing Brix domain protein5.0e-13773.72Show/hide
Query:  GEEKKDKGIIPSMIKNKEKRAEVHANLKNQKKLEKRKRAKARDAAEKQALELGEELPPRKIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRNI
        G EK++  I+PSMIKNK+KR++V+A  K++KKLEK+K+ +ARDAAEK+ALELGEE P + IP+TIENTRE DETVC+PDDEELFA  DADEF+ +++R I
Subjt:  GEEKKDKGIIPSMIKNKEKRAEVHANLKNQKKLEKRKRAKARDAAEKQALELGEELPPRKIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRNI

Query:  LPKVLITTCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEYANAEDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNPTS
         PKVL+TTCRFNST GPA ISELLSVIPN+HY KRGT DLKKI+EYA  +DFTSL+VVHT+RR+ D LLIIGLP GPTAHFK+SN+VLRKDIKNHGNPTS
Subjt:  LPKVLITTCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEYANAEDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNPTS

Query:  HQPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVATFHNQRDFIFFRHHRYIFESKENKKESDSKNKSKDTKGEKVLQQKVVARLQECGPRFTMKLI
        HQPELVL NFTTRLG RVGR  QSLFP DPNFRGRRV TFHNQRDFIFFRHHRYIFE+KE          SK  KG+   ++ +  RLQECGPRFT+KL+
Subjt:  HQPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVATFHNQRDFIFFRHHRYIFESKENKKESDSKNKSKDTKGEKVLQQKVVARLQECGPRFTMKLI

Query:  SLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL
        +LQHGTFD+KGGE+EWVHKPEMDTSRRRFFL
Subjt:  SLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGGAGGAGAAAAAGGACAAGGGTATAATCCCATCAATGATAAAGAACAAAGAAAAGAGGGCAGAAGTGCACGCCAACCTCAAGAACCAGAAGAAGCTTGAGAAACG
TAAGAGGGCCAAGGCTCGTGATGCTGCTGAGAAGCAAGCTCTTGAACTTGGAGAAGAACTTCCTCCTAGGAAGATTCCTCGCACCATTGAGAACACCAGGGAAGTTGATG
AGACTGTTTGCAAACCTGATGATGAAGAGCTATTTGCTGGAAATGATGCCGATGAATTTAGTTCCATCATAAAGCGCAACATTTTGCCGAAAGTTCTAATTACTACTTGT
CGTTTTAATTCTACTATTGGACCTGCTTTTATATCAGAGTTGCTTTCGGTGATACCAAATGCACATTACTACAAGAGAGGAACTAACGATTTGAAGAAGATTATAGAATA
TGCAAATGCCGAGGACTTCACTTCTTTGATGGTTGTCCATACGAGTAGGAGAAAATTGGATGGTCTTTTAATTATTGGCTTACCTGAGGGACCTACTGCGCATTTTAAGA
TATCTAATGTTGTCTTACGTAAGGATATTAAGAATCATGGAAATCCAACCAGTCATCAGCCAGAGCTGGTGTTGACCAACTTCACAACACGCCTTGGTCTTCGTGTTGGA
AGATTAATACAATCACTATTCCCTCAAGATCCTAATTTTCGTGGTCGACGGGTTGCAACTTTTCACAACCAACGAGATTTTATATTCTTTCGGCATCATCGATACATTTT
TGAAAGCAAGGAAAATAAGAAAGAGTCAGACTCAAAAAATAAGTCCAAGGATACCAAGGGTGAGAAAGTTCTTCAGCAGAAAGTAGTTGCTCGGCTTCAGGAATGTGGTC
CTCGTTTCACAATGAAATTGATCAGTTTGCAGCACGGAACTTTCGATTCAAAAGGCGGAGAATATGAATGGGTTCATAAGCCTGAAATGGATACCAGCCGCAGAAGATTT
TTCTTGTAA
mRNA sequenceShow/hide mRNA sequence
CCTCCGTCCGCCACTAGTCCAACGCCGCCACTCCTCAGTCTTCTCCTTCGCCAGTCACCACCGCCCACGTCTTCTTTTTCTTCCGAAATCGGTCTTTCAGAGGTTGATCA
AGGAGTATAGATGGGGGAGGAGAAAAAGGACAAGGGTATAATCCCATCAATGATAAAGAACAAAGAAAAGAGGGCAGAAGTGCACGCCAACCTCAAGAACCAGAAGAAGC
TTGAGAAACGTAAGAGGGCCAAGGCTCGTGATGCTGCTGAGAAGCAAGCTCTTGAACTTGGAGAAGAACTTCCTCCTAGGAAGATTCCTCGCACCATTGAGAACACCAGG
GAAGTTGATGAGACTGTTTGCAAACCTGATGATGAAGAGCTATTTGCTGGAAATGATGCCGATGAATTTAGTTCCATCATAAAGCGCAACATTTTGCCGAAAGTTCTAAT
TACTACTTGTCGTTTTAATTCTACTATTGGACCTGCTTTTATATCAGAGTTGCTTTCGGTGATACCAAATGCACATTACTACAAGAGAGGAACTAACGATTTGAAGAAGA
TTATAGAATATGCAAATGCCGAGGACTTCACTTCTTTGATGGTTGTCCATACGAGTAGGAGAAAATTGGATGGTCTTTTAATTATTGGCTTACCTGAGGGACCTACTGCG
CATTTTAAGATATCTAATGTTGTCTTACGTAAGGATATTAAGAATCATGGAAATCCAACCAGTCATCAGCCAGAGCTGGTGTTGACCAACTTCACAACACGCCTTGGTCT
TCGTGTTGGAAGATTAATACAATCACTATTCCCTCAAGATCCTAATTTTCGTGGTCGACGGGTTGCAACTTTTCACAACCAACGAGATTTTATATTCTTTCGGCATCATC
GATACATTTTTGAAAGCAAGGAAAATAAGAAAGAGTCAGACTCAAAAAATAAGTCCAAGGATACCAAGGGTGAGAAAGTTCTTCAGCAGAAAGTAGTTGCTCGGCTTCAG
GAATGTGGTCCTCGTTTCACAATGAAATTGATCAGTTTGCAGCACGGAACTTTCGATTCAAAAGGCGGAGAATATGAATGGGTTCATAAGCCTGAAATGGATACCAGCCG
CAGAAGATTTTTCTTGTAACATTCTCATGGAGTTCATTATTTTTGGTTCTGGGGAGTAAAAGTTCTTTGGCTCTGATTTATATAAAAATTTTGGGTGGACTGCTTATCAA
ATTCGAATCTCCATTTCGCCCTGCATGTATGTTAGAAGAAGTTGATTTATTTTTCACTATTCAAAATTTTGTAGCATTCCAGTTGAGGTTGAGTTTGTTTTAGAGGCACC
AATGTATTGGTATTTGAAAGCATTTGGATAGTATAGTGTTATTTCTAGTAGCTGACAATTCAAAAGAAAAAGCCACATATTCATTCTCTGATAGTGGGTAAAAGGGTTGA
GATTCAGGAGCTTAGAGAATGCAATTTGGA
Protein sequenceShow/hide protein sequence
MGEEKKDKGIIPSMIKNKEKRAEVHANLKNQKKLEKRKRAKARDAAEKQALELGEELPPRKIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRNILPKVLITTC
RFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEYANAEDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNPTSHQPELVLTNFTTRLGLRVG
RLIQSLFPQDPNFRGRRVATFHNQRDFIFFRHHRYIFESKENKKESDSKNKSKDTKGEKVLQQKVVARLQECGPRFTMKLISLQHGTFDSKGGEYEWVHKPEMDTSRRRF
FL