; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CcUC10G202190 (gene) of Watermelon (PI 537277) v1 genome

Gene IDCcUC10G202190
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionOxidored_q6 domain-containing protein
Genome locationCicolChr10:29296788..29297650
RNA-Seq ExpressionCcUC10G202190
SyntenyCcUC10G202190
Gene Ontology termsGO:0022900 - electron transport chain (biological process)
GO:0008137 - NADH dehydrogenase (ubiquinone) activity (molecular function)
GO:0046872 - metal ion binding (molecular function)
GO:0048038 - quinone binding (molecular function)
GO:0051539 - 4 iron, 4 sulfur cluster binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAB4102552.1 unnamed protein product [Lactuca saligna]5.4e-1693.75Show/hide
Query:  RYSNAMNDPVSNTGDNISKRTFSCASRHAELHIFLYSQKGIDSVKDEI
        RYSNAMNDPV+NTG+NISKRTFSCASRHAELHIFLYSQKGIDSVKD I
Subjt:  RYSNAMNDPVSNTGDNISKRTFSCASRHAELHIFLYSQKGIDSVKDEI
KAF1876835.1 hypothetical protein Lal_00033123 [Lupinus albus]2.5e-1384.78Show/hide
Query:  MNDPVSNTGDNISKRTFSCASRHAELHIFLYSQKGIDSVKDEIILR
        MN+PVSNTG+NISKRTFSCASRH ELHIFLYS+KG+DS+KDEII R
Subjt:  MNDPVSNTGDNISKRTFSCASRHAELHIFLYSQKGIDSVKDEIILR
KOM47274.1 hypothetical protein LR48_Vigan07g097800 [Vigna angularis]4.5e-1079.55Show/hide
Query:  MNDPVSNTGDNISKRTFSCASRHAELHIFLYSQK-GIDSVKDEI
        MN+PVS+TG+NISKRTFSCASRH ELHIFLYSQK G++S+KD+I
Subjt:  MNDPVSNTGDNISKRTFSCASRHAELHIFLYSQK-GIDSVKDEI
TrEMBL top hitse value%identityAlignment
A0A0L9UXJ3 Uncharacterized protein2.2e-1079.55Show/hide
Query:  MNDPVSNTGDNISKRTFSCASRHAELHIFLYSQK-GIDSVKDEI
        MN+PVS+TG+NISKRTFSCASRH ELHIFLYSQK G++S+KD+I
Subjt:  MNDPVSNTGDNISKRTFSCASRHAELHIFLYSQK-GIDSVKDEI
A0A6A5N344 Uncharacterized protein1.2e-1384.78Show/hide
Query:  MNDPVSNTGDNISKRTFSCASRHAELHIFLYSQKGIDSVKDEIILR
        MN+PVSNTG+NISKRTFSCASRH ELHIFLYS+KG+DS+KDEII R
Subjt:  MNDPVSNTGDNISKRTFSCASRHAELHIFLYSQKGIDSVKDEIILR
A0A6S7NP34 Oxidored_q6 domain-containing protein2.6e-1693.75Show/hide
Query:  RYSNAMNDPVSNTGDNISKRTFSCASRHAELHIFLYSQKGIDSVKDEI
        RYSNAMNDPV+NTG+NISKRTFSCASRHAELHIFLYSQKGIDSVKD I
Subjt:  RYSNAMNDPVSNTGDNISKRTFSCASRHAELHIFLYSQKGIDSVKDEI
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTAAGAAGGTATAGTAATGCTATGAATGACCCAGTATCGAATACTGGTGATAATATCAGCAAAAGAACGTTCTCCTGTGCTTCCAGACATGCCGAGCTCCACATATT
CTTGTACAGTCAAAAGGGGATCGATTCCGTAAAAGATGAGATCATATTAAGGGTTCTCTCGGTTATTGGCTTCGGGCTAGAAAGCGAAGATTGGGTAAAATGTGAATCCG
ACTGGTTGGAATTGGTTAGTCGTCCAGTAACAAGTAAGAGTAGTACATAG
mRNA sequenceShow/hide mRNA sequence
ATGGTAAGAAGGTATAGTAATGCTATGAATGACCCAGTATCGAATACTGGTGATAATATCAGCAAAAGAACGTTCTCCTGTGCTTCCAGACATGCCGAGCTCCACATATT
CTTGTACAGTCAAAAGGGGATCGATTCCGTAAAAGATGAGATCATATTAAGGGTTCTCTCGGTTATTGGCTTCGGGCTAGAAAGCGAAGATTGGGTAAAATGTGAATCCG
ACTGGTTGGAATTGGTTAGTCGTCCAGTAACAAGTAAGAGTAGTACATAG
Protein sequenceShow/hide protein sequence
MVRRYSNAMNDPVSNTGDNISKRTFSCASRHAELHIFLYSQKGIDSVKDEIILRVLSVIGFGLESEDWVKCESDWLELVSRPVTSKSST