; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CcUC10G204580 (gene) of Watermelon (PI 537277) v1 genome

Gene IDCcUC10G204580
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionRAB6-interacting golgin
Genome locationCicolChr10:31887619..31890187
RNA-Seq ExpressionCcUC10G204580
SyntenyCcUC10G204580
Gene Ontology termsGO:0005794 - Golgi apparatus (cellular component)
InterPro domainsIPR007033 - RAB6-interacting golgin


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004137876.1 GRB10-interacting GYF protein 2 [Cucumis sativus]5.5e-7395.35Show/hide
Query:  MQTEQANQQQQLVVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKVQAQLGRVEEETKRLACIREFCKHQELEALADPMRKEVAQV
        MQ EQA QQQQL+VQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKVQAQLGRVEEETKRLACIRE     ELEALADPMRKEVAQV
Subjt:  MQTEQANQQQQLVVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKVQAQLGRVEEETKRLACIREFCKHQELEALADPMRKEVAQV

Query:  RKKIDAVNKELKPLGHTCQKKEKEYKEALEAFNDKNKEKVQLITKLMELVSESERLRLKKLEELSKNIDTIR
        RKKIDAVNKELKPLGHTCQKKEKEYKEALEAFNDKNKEKVQLITKLMELVSESERLRLKKLEELSKNIDTIR
Subjt:  RKKIDAVNKELKPLGHTCQKKEKEYKEALEAFNDKNKEKVQLITKLMELVSESERLRLKKLEELSKNIDTIR

XP_008442808.1 PREDICTED: uncharacterized protein LOC103486581 [Cucumis melo]1.2e-7294.77Show/hide
Query:  MQTEQANQQQQLVVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKVQAQLGRVEEETKRLACIREFCKHQELEALADPMRKEVAQV
        MQ EQA QQQQL+VQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKVQAQLGRVEEETKRLACIRE     ELEALADPMRKEVAQV
Subjt:  MQTEQANQQQQLVVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKVQAQLGRVEEETKRLACIREFCKHQELEALADPMRKEVAQV

Query:  RKKIDAVNKELKPLGHTCQKKEKEYKEALEAFNDKNKEKVQLITKLMELVSESERLRLKKLEELSKNIDTIR
        RK+IDAVNKELKPLGHTCQKKEKEYKEALEAFNDKNKEKVQLITKLMELVSESERLRLKKLEELSKNIDTIR
Subjt:  RKKIDAVNKELKPLGHTCQKKEKEYKEALEAFNDKNKEKVQLITKLMELVSESERLRLKKLEELSKNIDTIR

XP_022144720.1 uncharacterized protein LOC111014340 [Momordica charantia]8.2e-6991.86Show/hide
Query:  MQTEQANQQQQLVVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKVQAQLGRVEEETKRLACIREFCKHQELEALADPMRKEVAQV
        MQTEQ   QQQL+VQNN GSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKVQ QLGRVEEETKRLACIRE     ELEALADPMRKEVAQV
Subjt:  MQTEQANQQQQLVVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKVQAQLGRVEEETKRLACIREFCKHQELEALADPMRKEVAQV

Query:  RKKIDAVNKELKPLGHTCQKKEKEYKEALEAFNDKNKEKVQLITKLMELVSESERLRLKKLEELSKNIDTIR
        RKKIDAVNKELKPLGHTCQKKEKEYK+AL+AFN+KNKEKVQLITKLMELVSESERLRLKKLEELSKNIDTIR
Subjt:  RKKIDAVNKELKPLGHTCQKKEKEYKEALEAFNDKNKEKVQLITKLMELVSESERLRLKKLEELSKNIDTIR

XP_022945279.1 uncharacterized protein LOC111449572 [Cucurbita moschata]1.8e-7193.6Show/hide
Query:  MQTEQANQQQQLVVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKVQAQLGRVEEETKRLACIREFCKHQELEALADPMRKEVAQV
        MQ EQA QQQQLVVQNN GSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKVQ QLGRVEEETKRLACIRE     ELEALADPMRKEVAQV
Subjt:  MQTEQANQQQQLVVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKVQAQLGRVEEETKRLACIREFCKHQELEALADPMRKEVAQV

Query:  RKKIDAVNKELKPLGHTCQKKEKEYKEALEAFNDKNKEKVQLITKLMELVSESERLRLKKLEELSKNIDTIR
        RK+IDAVNKELKPLGHTCQKKEKEYKEAL+AFNDKNKEKVQLITKLMELVSESERLRLKKLEELSKNIDTIR
Subjt:  RKKIDAVNKELKPLGHTCQKKEKEYKEALEAFNDKNKEKVQLITKLMELVSESERLRLKKLEELSKNIDTIR

XP_038903091.1 GRB10-interacting GYF protein 2-like [Benincasa hispida]1.1e-7395.93Show/hide
Query:  MQTEQANQQQQLVVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKVQAQLGRVEEETKRLACIREFCKHQELEALADPMRKEVAQV
        MQTEQA QQQQL+VQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKVQAQLGRVEEETKRLACIRE     ELEALADPMRKEVAQV
Subjt:  MQTEQANQQQQLVVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKVQAQLGRVEEETKRLACIREFCKHQELEALADPMRKEVAQV

Query:  RKKIDAVNKELKPLGHTCQKKEKEYKEALEAFNDKNKEKVQLITKLMELVSESERLRLKKLEELSKNIDTIR
        RKKIDAVNKELKPLGHTCQKKEKEYKEALEAFNDKNKEKVQLITKLMELVSESERLRLKKLEELSKNIDTIR
Subjt:  RKKIDAVNKELKPLGHTCQKKEKEYKEALEAFNDKNKEKVQLITKLMELVSESERLRLKKLEELSKNIDTIR

TrEMBL top hitse value%identityAlignment
A0A0A0LGI7 RAB6-interacting golgin2.7e-7395.35Show/hide
Query:  MQTEQANQQQQLVVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKVQAQLGRVEEETKRLACIREFCKHQELEALADPMRKEVAQV
        MQ EQA QQQQL+VQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKVQAQLGRVEEETKRLACIRE     ELEALADPMRKEVAQV
Subjt:  MQTEQANQQQQLVVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKVQAQLGRVEEETKRLACIREFCKHQELEALADPMRKEVAQV

Query:  RKKIDAVNKELKPLGHTCQKKEKEYKEALEAFNDKNKEKVQLITKLMELVSESERLRLKKLEELSKNIDTIR
        RKKIDAVNKELKPLGHTCQKKEKEYKEALEAFNDKNKEKVQLITKLMELVSESERLRLKKLEELSKNIDTIR
Subjt:  RKKIDAVNKELKPLGHTCQKKEKEYKEALEAFNDKNKEKVQLITKLMELVSESERLRLKKLEELSKNIDTIR

A0A1S3B6L6 RAB6-interacting golgin5.9e-7394.77Show/hide
Query:  MQTEQANQQQQLVVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKVQAQLGRVEEETKRLACIREFCKHQELEALADPMRKEVAQV
        MQ EQA QQQQL+VQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKVQAQLGRVEEETKRLACIRE     ELEALADPMRKEVAQV
Subjt:  MQTEQANQQQQLVVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKVQAQLGRVEEETKRLACIREFCKHQELEALADPMRKEVAQV

Query:  RKKIDAVNKELKPLGHTCQKKEKEYKEALEAFNDKNKEKVQLITKLMELVSESERLRLKKLEELSKNIDTIR
        RK+IDAVNKELKPLGHTCQKKEKEYKEALEAFNDKNKEKVQLITKLMELVSESERLRLKKLEELSKNIDTIR
Subjt:  RKKIDAVNKELKPLGHTCQKKEKEYKEALEAFNDKNKEKVQLITKLMELVSESERLRLKKLEELSKNIDTIR

A0A5D3DPH8 RAB6-interacting golgin5.9e-7394.77Show/hide
Query:  MQTEQANQQQQLVVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKVQAQLGRVEEETKRLACIREFCKHQELEALADPMRKEVAQV
        MQ EQA QQQQL+VQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKVQAQLGRVEEETKRLACIRE     ELEALADPMRKEVAQV
Subjt:  MQTEQANQQQQLVVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKVQAQLGRVEEETKRLACIREFCKHQELEALADPMRKEVAQV

Query:  RKKIDAVNKELKPLGHTCQKKEKEYKEALEAFNDKNKEKVQLITKLMELVSESERLRLKKLEELSKNIDTIR
        RK+IDAVNKELKPLGHTCQKKEKEYKEALEAFNDKNKEKVQLITKLMELVSESERLRLKKLEELSKNIDTIR
Subjt:  RKKIDAVNKELKPLGHTCQKKEKEYKEALEAFNDKNKEKVQLITKLMELVSESERLRLKKLEELSKNIDTIR

A0A6J1G0J9 RAB6-interacting golgin8.5e-7293.6Show/hide
Query:  MQTEQANQQQQLVVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKVQAQLGRVEEETKRLACIREFCKHQELEALADPMRKEVAQV
        MQ EQA QQQQLVVQNN GSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKVQ QLGRVEEETKRLACIRE     ELEALADPMRKEVAQV
Subjt:  MQTEQANQQQQLVVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKVQAQLGRVEEETKRLACIREFCKHQELEALADPMRKEVAQV

Query:  RKKIDAVNKELKPLGHTCQKKEKEYKEALEAFNDKNKEKVQLITKLMELVSESERLRLKKLEELSKNIDTIR
        RK+IDAVNKELKPLGHTCQKKEKEYKEAL+AFNDKNKEKVQLITKLMELVSESERLRLKKLEELSKNIDTIR
Subjt:  RKKIDAVNKELKPLGHTCQKKEKEYKEALEAFNDKNKEKVQLITKLMELVSESERLRLKKLEELSKNIDTIR

A0A6J1KYK3 RAB6-interacting golgin8.5e-7293.6Show/hide
Query:  MQTEQANQQQQLVVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKVQAQLGRVEEETKRLACIREFCKHQELEALADPMRKEVAQV
        MQ EQA QQQQLVVQNN GSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKVQ QLGRVEEETKRLACIRE     ELEALADPMRKEVAQV
Subjt:  MQTEQANQQQQLVVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKVQAQLGRVEEETKRLACIREFCKHQELEALADPMRKEVAQV

Query:  RKKIDAVNKELKPLGHTCQKKEKEYKEALEAFNDKNKEKVQLITKLMELVSESERLRLKKLEELSKNIDTIR
        RK+IDAVNKELKPLGHTCQKKEKEYKEAL+AFNDKNKEKVQLITKLMELVSESERLRLKKLEELSKNIDTIR
Subjt:  RKKIDAVNKELKPLGHTCQKKEKEYKEALEAFNDKNKEKVQLITKLMELVSESERLRLKKLEELSKNIDTIR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G36410.1 Family of unknown function (DUF662)5.1e-5369.36Show/hide
Query:  QTEQANQQQQLVVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKVQAQLGRVEEETKRLACIREFCKHQELEALADPMRKEVAQVR
        Q +   QQQ   +  +TGSLSFSSH+S+EDEE++RSALS FRAKE+EIE+++MEVRE++QAQLGRVE+ETKRL+ IRE     ELE++ADPMRKEV+ VR
Subjt:  QTEQANQQQQLVVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKVQAQLGRVEEETKRLACIREFCKHQELEALADPMRKEVAQVR

Query:  KKIDAVNKELKPLGHTCQKKEKEYKEALEAFNDKNKEKVQLITKLME---LVSESERLRLKKLEELSKNIDTI
        KKID+VNKELKPLG T QKKE+EYKEAL+ FN+KN+EKVQLITKLME   LV ESE+LR+ KLEELSK+I+T+
Subjt:  KKIDAVNKELKPLGHTCQKKEKEYKEALEAFNDKNKEKVQLITKLME---LVSESERLRLKKLEELSKNIDTI

AT2G36410.2 Family of unknown function (DUF662)1.2e-5470.59Show/hide
Query:  QTEQANQQQQLVVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKVQAQLGRVEEETKRLACIREFCKHQELEALADPMRKEVAQVR
        Q +   QQQ   +  +TGSLSFSSH+S+EDEE++RSALS FRAKE+EIE+++MEVRE++QAQLGRVE+ETKRL+ IRE     ELE++ADPMRKEV+ VR
Subjt:  QTEQANQQQQLVVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKVQAQLGRVEEETKRLACIREFCKHQELEALADPMRKEVAQVR

Query:  KKIDAVNKELKPLGHTCQKKEKEYKEALEAFNDKNKEKVQLITKLMELVSESERLRLKKLEELSKNIDTI
        KKID+VNKELKPLG T QKKE+EYKEAL+ FN+KN+EKVQLITKLMELV ESE+LR+ KLEELSK+I+T+
Subjt:  KKIDAVNKELKPLGHTCQKKEKEYKEALEAFNDKNKEKVQLITKLMELVSESERLRLKKLEELSKNIDTI

AT2G36410.3 Family of unknown function (DUF662)1.8e-5370Show/hide
Query:  QTEQANQQQQLVVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKVQAQLGRVEEETKRLACIREFCKHQELEALADPMRKEVAQVR
        Q +   QQQ   +  +TGSLSFSSH+S+EDEE++RSALS FRAKE+EIE+++MEVRE++QAQLGRVE+ETKRL+ IRE     ELE++ADPMRKEV+ VR
Subjt:  QTEQANQQQQLVVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKVQAQLGRVEEETKRLACIREFCKHQELEALADPMRKEVAQVR

Query:  KKIDAVNKELKPLGHTCQKKEKEYKEALEAFNDKNKEKVQLITKLMELVSESERLRLKKLEELSKNIDTI
        KKID+VNKELKPLG T QKK  EYKEAL+ FN+KN+EKVQLITKLMELV ESE+LR+ KLEELSK+I+T+
Subjt:  KKIDAVNKELKPLGHTCQKKEKEYKEALEAFNDKNKEKVQLITKLMELVSESERLRLKKLEELSKNIDTI

AT3G09980.1 Family of unknown function (DUF662)8.2e-5981.17Show/hide
Query:  TGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKVQAQLGRVEEETKRLACIREFCKHQELEALADPMRKEVAQVRKKIDAVNKELKPLGHT
        +GS+SFSS +SKEDEE+SR+ALS FRAKEEEIE+KKME+RE+VQAQLGRVEEETKRLA IRE     ELE LADPMRKEVA VRKKID+VNKELKPLGHT
Subjt:  TGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKVQAQLGRVEEETKRLACIREFCKHQELEALADPMRKEVAQVRKKIDAVNKELKPLGHT

Query:  CQKKEKEYKEALEAFNDKNKEKVQLITKLMELVSESERLRLKKLEELSKNIDTI
         QKKE+EYKEALEAFN+KN+EKVQLIT+LMELV ESE++R+KKLEELSKNID+I
Subjt:  CQKKEKEYKEALEAFNDKNKEKVQLITKLMELVSESERLRLKKLEELSKNIDTI

AT3G52920.2 Family of unknown function (DUF662)2.3e-5377.48Show/hide
Query:  SLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKVQAQLGRVEEETKRLACIREFCKHQELEALADPMRKEVAQVRKKIDAVNKELKPLGHTCQ
        SLSFSS +SKEDEE++RSALS FRAKE+EIE++KMEVRE+V+AQLGRVEEET+RLA IRE     ELE +ADPMRKEV  VRKKID+VNKELKPLG T Q
Subjt:  SLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKVQAQLGRVEEETKRLACIREFCKHQELEALADPMRKEVAQVRKKIDAVNKELKPLGHTCQ

Query:  KKEKEYKEALEAFNDKNKEKVQLITKLMELVSESERLRLKKLEELSKNIDT
        KKE+EYKEAL+ FN+KN+EKVQLITKLMELV ESE+LRLKKL+ELS++IDT
Subjt:  KKEKEYKEALEAFNDKNKEKVQLITKLMELVSESERLRLKKLEELSKNIDT


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAGACCGAACAGGCTAATCAACAGCAACAATTAGTGGTGCAGAACAACACAGGAAGCTTAAGCTTTAGCAGCCATTTGTCTAAGGAAGATGAAGAGATTTCCAGGTC
GGCTCTCTCCACTTTCAGAGCTAAAGAAGAGGAGATCGAGAGGAAGAAGATGGAGGTCAGAGAGAAGGTTCAAGCACAGTTAGGCCGTGTTGAAGAAGAAACCAAACGTC
TCGCTTGCATCCGTGAGTTTTGCAAACACCAGGAACTTGAGGCCTTGGCAGATCCAATGAGGAAGGAAGTAGCACAGGTTCGTAAAAAGATCGATGCTGTAAACAAGGAA
TTAAAGCCTCTTGGACATACCTGTCAAAAGAAGGAAAAAGAGTACAAGGAAGCCCTCGAAGCCTTTAACGACAAGAACAAGGAAAAAGTTCAGCTCATCACAAAATTAAT
GGAGCTGGTGAGTGAAAGTGAGAGGTTGAGGCTGAAGAAGCTGGAGGAGCTGAGTAAGAACATAGATACGATTCGGTAA
mRNA sequenceShow/hide mRNA sequence
ATACCCATAACCCACAGCTGAAAAGAAAAATTGAAATACAGCACAAACCCCATCATTTCAAAAGCAAAAGCAAAAGAGAAGAGAGAGAATACACAAACTCAAGAGAGAGA
AAAAAGCAACAAACCCAGAAAGAAAGGAAGAAGAACAGGAAGAAGAACAGGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAACAGAGGAAATAGAAGGAAATTAAA
AGAAGAAGAAAAAGGGTTTTGTAGTTTAAGACGATGCAGACCGAACAGGCTAATCAACAGCAACAATTAGTGGTGCAGAACAACACAGGAAGCTTAAGCTTTAGCAGCCA
TTTGTCTAAGGAAGATGAAGAGATTTCCAGGTCGGCTCTCTCCACTTTCAGAGCTAAAGAAGAGGAGATCGAGAGGAAGAAGATGGAGGTCAGAGAGAAGGTTCAAGCAC
AGTTAGGCCGTGTTGAAGAAGAAACCAAACGTCTCGCTTGCATCCGTGAGTTTTGCAAACACCAGGAACTTGAGGCCTTGGCAGATCCAATGAGGAAGGAAGTAGCACAG
GTTCGTAAAAAGATCGATGCTGTAAACAAGGAATTAAAGCCTCTTGGACATACCTGTCAAAAGAAGGAAAAAGAGTACAAGGAAGCCCTCGAAGCCTTTAACGACAAGAA
CAAGGAAAAAGTTCAGCTCATCACAAAATTAATGGAGCTGGTGAGTGAAAGTGAGAGGTTGAGGCTGAAGAAGCTGGAGGAGCTGAGTAAGAACATAGATACGATTCGGT
AACTGAATTGATTGATTGATTGATTGGAGCGATGGATGACAAAGTGATAACCCTCTGTTTATTAGGCTTTTGGTGTGATGTATTTAATATAAAGAAGAAGAAAAAGGACT
TGTTTGTGTATTTATTGAAATCTGGGTGTTCTCTGTGTTTTGGGTGTATTTTTATAATTTGTCTTTGTTTGTTTATTTTTCCTCTAGAGAAGTTACTCAAAACATTTAAC
TGATTTTAGGAAGGGAATTGCCCTACAAAACAGGGGAAAAATCCAACTAGTCGCAGTTCAAATATTTGTAATGTTGAAATGTTACTAGATCCCAAGTTTATTGATGAATT
AGAGTATGTTTAATCTTTAATTGATCTTAACTATGTAGTTTTGCATGGTTGGATGTGAGAAAGAAACTGTAAAAGTATATCGAATTTATACCATGGTTATTAGGTAGGAC
ACAGACACAGGGTTGCATGCCTCATTC
Protein sequenceShow/hide protein sequence
MQTEQANQQQQLVVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKVQAQLGRVEEETKRLACIREFCKHQELEALADPMRKEVAQVRKKIDAVNKE
LKPLGHTCQKKEKEYKEALEAFNDKNKEKVQLITKLMELVSESERLRLKKLEELSKNIDTIR