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CcUC10G206540 (gene) of Watermelon (PI 537277) v1 genome

Gene IDCcUC10G206540
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
Descriptioncyclin-dependent protein kinase inhibitor SMR4
Genome locationCicolChr10:33553758..33554306
RNA-Seq ExpressionCcUC10G206540
SyntenyCcUC10G206540
Gene Ontology termsGO:0032875 - regulation of DNA endoreduplication (biological process)
GO:0045839 - negative regulation of mitotic nuclear division (biological process)
GO:0005634 - nucleus (cellular component)
InterPro domainsIPR040389 - Cyclin-dependent protein kinase inhibitor SMR


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6580535.1 Cyclin-dependent protein kinase inhibitor SMR4, partial [Cucurbita argyrosperma subsp. sororia]8.7e-3087.84Show/hide
Query:  MEAKQGSANYEEECSTPTRWECRIPAVFNCPPPP---KKKVGSDGKKRDPPKHGYFQPPDLEALFSVPPRREAC
        MEAKQG ANYEEECSTPTRWECRIPAV NCPPPP   KKK  S GKKR+PPKHGYFQPPDLEALFSVPPRREAC
Subjt:  MEAKQGSANYEEECSTPTRWECRIPAVFNCPPPP---KKKVGSDGKKRDPPKHGYFQPPDLEALFSVPPRREAC

XP_022983341.1 cyclin-dependent protein kinase inhibitor SMR4 [Cucurbita maxima]3.0e-3087.84Show/hide
Query:  MEAKQGSANYEEECSTPTRWECRIPAVFNCPPPP---KKKVGSDGKKRDPPKHGYFQPPDLEALFSVPPRREAC
        MEAKQG ANYEEECSTPTRWECRIPAVFNCPPPP   KKK    GKKR+PPKHGYFQPPDLEALFSVPPRREAC
Subjt:  MEAKQGSANYEEECSTPTRWECRIPAVFNCPPPP---KKKVGSDGKKRDPPKHGYFQPPDLEALFSVPPRREAC

XP_023528630.1 cyclin-dependent protein kinase inhibitor SMR4 [Cucurbita pepo subsp. pepo]1.0e-3089.19Show/hide
Query:  MEAKQGSANYEEECSTPTRWECRIPAVFNCPPPP---KKKVGSDGKKRDPPKHGYFQPPDLEALFSVPPRREAC
        MEAKQG ANYEEECSTPTRWECRIPAVFNCPPPP   KKK  S GKKR+PPKHGYFQPPDLEALFSVPPRREAC
Subjt:  MEAKQGSANYEEECSTPTRWECRIPAVFNCPPPP---KKKVGSDGKKRDPPKHGYFQPPDLEALFSVPPRREAC

XP_031737830.1 cyclin-dependent protein kinase inhibitor SMR4 [Cucumis sativus]3.5e-3186.11Show/hide
Query:  MEAKQGSANYEEECSTPTRWECRIPAVFNCPPPPKKKVGSDGKKRDPPKHGYFQPPDLEALFSVPPRREACA
        M++KQG+ NYEEECSTPTRWECRIPAVFNCPPPPKKK  + GKKR+PPKHGYFQPPDLEALFS+PPRREACA
Subjt:  MEAKQGSANYEEECSTPTRWECRIPAVFNCPPPPKKKVGSDGKKRDPPKHGYFQPPDLEALFSVPPRREACA

XP_038905412.1 cyclin-dependent protein kinase inhibitor SMR4 [Benincasa hispida]5.3e-3595.83Show/hide
Query:  MEAKQGSANYEEECSTPTRWECRIPAVFNCPPPPKKKVGSDGKKRDPPKHGYFQPPDLEALFSVPPRREACA
        MEAKQG ANYEEECSTPTRWECRIPAVFNCPPPPKKK+G+DGKKRDPPKHGYFQPPDLEALFSVPPRREACA
Subjt:  MEAKQGSANYEEECSTPTRWECRIPAVFNCPPPPKKKVGSDGKKRDPPKHGYFQPPDLEALFSVPPRREACA

TrEMBL top hitse value%identityAlignment
A0A0A0LAJ2 Uncharacterized protein4.4e-3579.55Show/hide
Query:  KLNQINLCQIFLISLGMEAKQGSANYEEECSTPTRWECRIPAVFNCPPPPKKKVGSDGKKRDPPKHGYFQPPDLEALFSVPPRREACA
        KL  INL  +  ISL M++KQG+ NYEEECSTPTRWECRIPAVFNCPPPPKKK  + GKKR+PPKHGYFQPPDLEALFS+PPRREACA
Subjt:  KLNQINLCQIFLISLGMEAKQGSANYEEECSTPTRWECRIPAVFNCPPPPKKKVGSDGKKRDPPKHGYFQPPDLEALFSVPPRREACA

A0A2N9GK17 Uncharacterized protein5.9e-1669.35Show/hide
Query:  EEECSTPTRWECRIPAVFNCPPPPKKKVGSDGKKRDPPKHGYFQPPDLEALFSVPPRREACA
        E  C+TP R EC+IP V  CPPPPKKK  S G KRDPPK+GYF PPDL+ALF++PPRREA A
Subjt:  EEECSTPTRWECRIPAVFNCPPPPKKKVGSDGKKRDPPKHGYFQPPDLEALFSVPPRREACA

A0A2P6RA04 Uncharacterized protein1.7e-1561.29Show/hide
Query:  EEECSTPTRWECRIPAVFNCPPPPKKKVGSDGKKRDPPKHGYFQPPDLEALFSVPPRREACA
        +E C+TP R ECRIP    CPP P+KK   D  KRDPPK+GYFQPPDL++LF++PPR + CA
Subjt:  EEECSTPTRWECRIPAVFNCPPPPKKKVGSDGKKRDPPKHGYFQPPDLEALFSVPPRREACA

A0A6J1J1Y0 cyclin-dependent protein kinase inhibitor SMR41.5e-3087.84Show/hide
Query:  MEAKQGSANYEEECSTPTRWECRIPAVFNCPPPP---KKKVGSDGKKRDPPKHGYFQPPDLEALFSVPPRREAC
        MEAKQG ANYEEECSTPTRWECRIPAVFNCPPPP   KKK    GKKR+PPKHGYFQPPDLEALFSVPPRREAC
Subjt:  MEAKQGSANYEEECSTPTRWECRIPAVFNCPPPP---KKKVGSDGKKRDPPKHGYFQPPDLEALFSVPPRREAC

A0A7N2M7Y9 Uncharacterized protein9.1e-1770.97Show/hide
Query:  EEECSTPTRWECRIPAVFNCPPPPKKKVGSDGKKRDPPKHGYFQPPDLEALFSVPPRREACA
        E+ CSTP R EC+IP V  CPPPPKKK  S G KRDPPK+GYFQPPDL+A+F++PPRREA A
Subjt:  EEECSTPTRWECRIPAVFNCPPPPKKKVGSDGKKRDPPKHGYFQPPDLEALFSVPPRREACA

SwissProt top hitse value%identityAlignment
Q1JPP8 Cyclin-dependent protein kinase inhibitor SMR43.1e-1461.29Show/hide
Query:  EEECSTPTRWECRIPAVFNCPPPPKKKVGSDGKKRDPPKHGYFQPPDLEALFSVPPRREACA
        EE C+TP     RIP    CPPPP+KK+    +KRDPP++GYFQPPDLE LF   PRREACA
Subjt:  EEECSTPTRWECRIPAVFNCPPPPKKKVGSDGKKRDPPKHGYFQPPDLEALFSVPPRREACA

Q9LNX4 Cyclin-dependent protein kinase inhibitor SMR52.2e-1254.69Show/hide
Query:  NYEEECSTPTRWECRIPAVFNCPPPPKKK--VGSDGKKRDPPKHGYFQPPDLEALFSVPPRREA
        +Y+  C+TPTR +CRIPA   CPPP ++K  +   GKKR+PPK GYFQPPDL+  FSV    +A
Subjt:  NYEEECSTPTRWECRIPAVFNCPPPPKKK--VGSDGKKRDPPKHGYFQPPDLEALFSVPPRREA

Arabidopsis top hitse value%identityAlignment
AT5G02220.1 unknown protein2.2e-1561.29Show/hide
Query:  EEECSTPTRWECRIPAVFNCPPPPKKKVGSDGKKRDPPKHGYFQPPDLEALFSVPPRREACA
        EE C+TP     RIP    CPPPP+KK+    +KRDPP++GYFQPPDLE LF   PRREACA
Subjt:  EEECSTPTRWECRIPAVFNCPPPPKKKVGSDGKKRDPPKHGYFQPPDLEALFSVPPRREACA

AT5G40460.1 unknown protein1.0e-0437.1Show/hide
Query:  EAKQGSANYEEECS-TPTRWECRIPAVFNCPPPPKKKVGSDGKKRDPPKHGYFQPPDLEALF
        E ++   N EEECS TPT  E +IP +  CPP P+K+  +   + +  +  +  P DLE +F
Subjt:  EAKQGSANYEEECS-TPTRWECRIPAVFNCPPPPKKKVGSDGKKRDPPKHGYFQPPDLEALF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTATTTTTAGCTGAGCTGAAAATTCAAAAGCTGTCTCCCACATCCACGCCACTCCCCGCCATTCATTTATCTCTCTCTTTCAACACACACCAAAATTTCAAAATCAA
ATTCGCCTCCTCCTCCTCCTCCTCCTATCGCCACCGTCCACGGCGGCGTTCTGGTCGGAGTTTCGAAATTTCATTACCTTCTTACAAACTCAACCAAATAAACCTGTGCC
AGATATTTCTCATTTCTCTGGGGATGGAGGCGAAACAGGGGTCTGCAAATTACGAGGAAGAGTGTTCGACGCCGACCCGGTGGGAGTGTCGGATTCCGGCGGTGTTCAAC
TGTCCGCCGCCGCCGAAGAAGAAAGTTGGAAGCGATGGGAAGAAGCGGGACCCACCCAAACATGGCTATTTTCAGCCACCTGATCTTGAGGCTCTGTTTTCTGTTCCTCC
CAGAAGGGAAGCCTGTGCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGTTATTTTTAGCTGAGCTGAAAATTCAAAAGCTGTCTCCCACATCCACGCCACTCCCCGCCATTCATTTATCTCTCTCTTTCAACACACACCAAAATTTCAAAATCAA
ATTCGCCTCCTCCTCCTCCTCCTCCTATCGCCACCGTCCACGGCGGCGTTCTGGTCGGAGTTTCGAAATTTCATTACCTTCTTACAAACTCAACCAAATAAACCTGTGCC
AGATATTTCTCATTTCTCTGGGGATGGAGGCGAAACAGGGGTCTGCAAATTACGAGGAAGAGTGTTCGACGCCGACCCGGTGGGAGTGTCGGATTCCGGCGGTGTTCAAC
TGTCCGCCGCCGCCGAAGAAGAAAGTTGGAAGCGATGGGAAGAAGCGGGACCCACCCAAACATGGCTATTTTCAGCCACCTGATCTTGAGGCTCTGTTTTCTGTTCCTCC
CAGAAGGGAAGCCTGTGCTTAA
Protein sequenceShow/hide protein sequence
MLFLAELKIQKLSPTSTPLPAIHLSLSFNTHQNFKIKFASSSSSSYRHRPRRRSGRSFEISLPSYKLNQINLCQIFLISLGMEAKQGSANYEEECSTPTRWECRIPAVFN
CPPPPKKKVGSDGKKRDPPKHGYFQPPDLEALFSVPPRREACA