; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CcUC10G206560 (gene) of Watermelon (PI 537277) v1 genome

Gene IDCcUC10G206560
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionUroporphyrinogen decarboxylase
Genome locationCicolChr10:33559571..33561425
RNA-Seq ExpressionCcUC10G206560
SyntenyCcUC10G206560
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GER35163.1 (Dimethylallyl)adenosine tRNAmethylthiotransferase MiaB [Striga asiatica]1.0e-0948.84Show/hide
Query:  EDSDSGGIVESALAGEVRASGHEESGINGEIGIGFEKDVGGLARAEQYDVGLEGLDVGGVDIDDGEGVVGDAEEKFIVECSVDQSE
        ED++ GG+VE  L GEV +  H   G+ G +G G E+DVGGL   ++ DV +EGL V GV + D +GV G+AEE+ +V+ SVDQ+E
Subjt:  EDSDSGGIVESALAGEVRASGHEESGINGEIGIGFEKDVGGLARAEQYDVGLEGLDVGGVDIDDGEGVVGDAEEKFIVECSVDQSE

GER43513.1 uroporphyrinogen decarboxylase [Striga asiatica]2.3e-1749.52Show/hide
Query:  LTQNNWDFFVGLLKRVRFVPAREDYNWAVNRNPEPRDVGMPKQTSSLPLEGEIVSVRLAGLDRALGHVSRSVRPTSSELADAVPVDGDILGHVVGDLDQD
        LT+ N DF VG L+RVR V   ED +  V R PEPRDVG+P++ S+L    EIV++ L  LDRALG+V R + P++++L ++VPV G+I+G ++GD  + 
Subjt:  LTQNNWDFFVGLLKRVRFVPAREDYNWAVNRNPEPRDVGMPKQTSSLPLEGEIVSVRLAGLDRALGHVSRSVRPTSSELADAVPVDGDILGHVVGDLDQD

Query:  SVAFS
        +VAFS
Subjt:  SVAFS

GER47234.1 uroporphyrinogen decarboxylase [Striga asiatica]3.8e-1749.52Show/hide
Query:  LTQNNWDFFVGLLKRVRFVPAREDYNWAVNRNPEPRDVGMPKQTSSLPLEGEIVSVRLAGLDRALGHVSRSVRPTSSELADAVPVDGDILGHVVGDLDQD
        LT+ N DF VG L+RVR V   ED +  V R PEPRDVG+P++ S+L    EIV++ L  LDRALG+V R + P++++L ++VPV G+I+G ++GD  + 
Subjt:  LTQNNWDFFVGLLKRVRFVPAREDYNWAVNRNPEPRDVGMPKQTSSLPLEGEIVSVRLAGLDRALGHVSRSVRPTSSELADAVPVDGDILGHVVGDLDQD

Query:  SVAFS
        +VAFS
Subjt:  SVAFS

GFZ10976.1 laccase 17 [Actinidia rufa]2.9e-0945.19Show/hide
Query:  EDSDSGGIVESALAGEVRASGHEESGINGEIGIGFEKDVGGLARAEQYDVGLEGLDVGGVDIDDGEGVVGDAEEKFIVECSVDQSENSESTFRRAVIEKA
        E S +G IVESALA E+ AS HEE G+  + G+GFEK + GLA ++   V  EG D+ GV   D  GVVG+AEE+FI++ SVD+ E+  +   +A     
Subjt:  EDSDSGGIVESALAGEVRASGHEESGINGEIGIGFEKDVGGLARAEQYDVGLEGLDVGGVDIDDGEGVVGDAEEKFIVECSVDQSENSESTFRRAVIEKA

Query:  GKSI
         K +
Subjt:  GKSI

RRT60960.1 hypothetical protein B296_00018371 [Ensete ventricosum]1.1e-0843.16Show/hide
Query:  HYPKFINQL---TQNNWDFFVGLLKRVRFVPAREDYNWAVNRNPEPRDVGMPKQTSSLPLEGEIVSVRLAGLDRALGHVSRSVRPTSSELADAVP
        H    +N+L   TQ+  DFF+   + +  V   +D N A+NR+ EPRDV +P Q +SLP EGE+V V LA L+RAL  V RS+ P   +L +++P
Subjt:  HYPKFINQL---TQNNWDFFVGLLKRVRFVPAREDYNWAVNRNPEPRDVGMPKQTSSLPLEGEIVSVRLAGLDRALGHVSRSVRPTSSELADAVP

TrEMBL top hitse value%identityAlignment
A0A426ZAD8 Uncharacterized protein5.4e-0943.16Show/hide
Query:  HYPKFINQL---TQNNWDFFVGLLKRVRFVPAREDYNWAVNRNPEPRDVGMPKQTSSLPLEGEIVSVRLAGLDRALGHVSRSVRPTSSELADAVP
        H    +N+L   TQ+  DFF+   + +  V   +D N A+NR+ EPRDV +P Q +SLP EGE+V V LA L+RAL  V RS+ P   +L +++P
Subjt:  HYPKFINQL---TQNNWDFFVGLLKRVRFVPAREDYNWAVNRNPEPRDVGMPKQTSSLPLEGEIVSVRLAGLDRALGHVSRSVRPTSSELADAVP

A0A5A7PQL4 (Dimethylallyl)adenosine tRNAmethylthiotransferase MiaB4.9e-1048.84Show/hide
Query:  EDSDSGGIVESALAGEVRASGHEESGINGEIGIGFEKDVGGLARAEQYDVGLEGLDVGGVDIDDGEGVVGDAEEKFIVECSVDQSE
        ED++ GG+VE  L GEV +  H   G+ G +G G E+DVGGL   ++ DV +EGL V GV + D +GV G+AEE+ +V+ SVDQ+E
Subjt:  EDSDSGGIVESALAGEVRASGHEESGINGEIGIGFEKDVGGLARAEQYDVGLEGLDVGGVDIDDGEGVVGDAEEKFIVECSVDQSE

A0A5A7QDX0 Uroporphyrinogen decarboxylase1.1e-1749.52Show/hide
Query:  LTQNNWDFFVGLLKRVRFVPAREDYNWAVNRNPEPRDVGMPKQTSSLPLEGEIVSVRLAGLDRALGHVSRSVRPTSSELADAVPVDGDILGHVVGDLDQD
        LT+ N DF VG L+RVR V   ED +  V R PEPRDVG+P++ S+L    EIV++ L  LDRALG+V R + P++++L ++VPV G+I+G ++GD  + 
Subjt:  LTQNNWDFFVGLLKRVRFVPAREDYNWAVNRNPEPRDVGMPKQTSSLPLEGEIVSVRLAGLDRALGHVSRSVRPTSSELADAVPVDGDILGHVVGDLDQD

Query:  SVAFS
        +VAFS
Subjt:  SVAFS

A0A5A7QPR8 Uroporphyrinogen decarboxylase1.9e-1749.52Show/hide
Query:  LTQNNWDFFVGLLKRVRFVPAREDYNWAVNRNPEPRDVGMPKQTSSLPLEGEIVSVRLAGLDRALGHVSRSVRPTSSELADAVPVDGDILGHVVGDLDQD
        LT+ N DF VG L+RVR V   ED +  V R PEPRDVG+P++ S+L    EIV++ L  LDRALG+V R + P++++L ++VPV G+I+G ++GD  + 
Subjt:  LTQNNWDFFVGLLKRVRFVPAREDYNWAVNRNPEPRDVGMPKQTSSLPLEGEIVSVRLAGLDRALGHVSRSVRPTSSELADAVPVDGDILGHVVGDLDQD

Query:  SVAFS
        +VAFS
Subjt:  SVAFS

A0A7J0GJJ4 Laccase 171.4e-0945.19Show/hide
Query:  EDSDSGGIVESALAGEVRASGHEESGINGEIGIGFEKDVGGLARAEQYDVGLEGLDVGGVDIDDGEGVVGDAEEKFIVECSVDQSENSESTFRRAVIEKA
        E S +G IVESALA E+ AS HEE G+  + G+GFEK + GLA ++   V  EG D+ GV   D  GVVG+AEE+FI++ SVD+ E+  +   +A     
Subjt:  EDSDSGGIVESALAGEVRASGHEESGINGEIGIGFEKDVGGLARAEQYDVGLEGLDVGGVDIDDGEGVVGDAEEKFIVECSVDQSENSESTFRRAVIEKA

Query:  GKSI
         K +
Subjt:  GKSI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGGATTCCGACAGTGGTGGAATTGTCGAAAGTGCCCTGGCCGGTGAAGTAAGGGCGAGCGGCCATGAGGAAAGTGGAATTAACGGTGAAATTGGGATTGGTTTTGA
GAAGGACGTTGGAGGTCTGGCCAGGGCTGAGCAATACGACGTCGGTTTGGAAGGGCTTGACGTAGGAGGCGTCGACATCGACGACGGTGAGGGAGTGGTTGGCGATGCTG
AAGAAAAGTTCATCGTTGAGTGCAGCGTTGATCAATCGGAGAATAGTGAGAGTACCTTTAGAAGAGCAGTTATAGAGAAGGCCGGGAAGTCCATTAATGGTGTAAGCATC
AGAAACGTTAGGCCCTCCTCCCGTCTGCAGAGCTTGTTGAATCACACTCTCTGGGTTCACGTTAAACCACTCTCCTGCACAAAAACCACGTCGCTTCACTCCATATCCAA
TCTAATCCATTATCCCAAATTCATTAATCAACTCACCCAAAACAATTGGGACTTCTTTGTGGGGCTTCTCAAAAGGGTAAGATTCGTTCCGGCGAGGGAGGATTATAATT
GGGCCGTAAATCGTAACCCTGAGCCACGAGATGTGGGCATGCCAAAGCAGACTTCCTCTCTGCCCCTTGAGGGTGAAATTGTAAGTGTACGATTGGCCGGTTTGGATCGG
GCATTGGGTCACGTAAGCCGGTCCGTCCGCCCAACCAGTTCGGAGCTGGCGGACGCCGTGCCAGTGGATGGTGACATTCTCGGCCACGTGGTTGGTGACCTTGATCAGGA
CTCGGTCGCCTTCTCTAGCCACTAA
mRNA sequenceShow/hide mRNA sequence
CCAAAATTTAATTCAACGGGTACGGAGAGAGAAATTAATCTCACCTGGGTTGTCAGCGAAGAAACGGAAGGCGATCCAGCCGGCGGCGGGAACGCCGGCGGTGTTCCTCT
CAACAGGGTCAACAAGATTGAAGTTAGCCGGATCTTTATTGGGGTCAAAATTTCCAAAACCTTCTCCAACTATGAAGAAATTATATCCATGAAGATGAAGAGGATGACTC
TCCGCCCCCAAAATACTCGTCCCCTGCAAAACCACCTCCACACTCGCATTGAACGGCAACACCACCAAACTCGTACTGTTACTCACAACCGTATTATTCGGCGGCGTTCC
GGTATAGTTGAACGGAAACATCGGCCGCGCCGGGAAATCAGTCCGGTAAACCCCATTAGCCCGGCGGGAGTAATAGGCTTGCATAATCGCCGTCGACGGAAGGGCAAAAG
AGACATTGTTGATAGAGGCAGCAAATTTTGTGCCATTGGGACCTTGACACGTGGCGTTTTTGGGGCAAGGGGCAGTTCCAAGTCCGACGGTGAAGAAAAATTTCTTGTCC
ACCGTTCGGGGAACGTTAACAGGGAATTTGGCGGTGGCTAGAGACCGTAATTTTCTGGAGAAATTAGCGACGAAATTGGTGTCGTTAATAGCGGGGAGATTGGGAATTAG
AGTTGTCGGAATTGGAGTGGGCGGAGAGTGGCCGTAATGGAGGATTCCGACAGTGGTGGAATTGTCGAAAGTGCCCTGGCCGGTGAAGTAAGGGCGAGCGGCCATGAGGA
AAGTGGAATTAACGGTGAAATTGGGATTGGTTTTGAGAAGGACGTTGGAGGTCTGGCCAGGGCTGAGCAATACGACGTCGGTTTGGAAGGGCTTGACGTAGGAGGCGTCG
ACATCGACGACGGTGAGGGAGTGGTTGGCGATGCTGAAGAAAAGTTCATCGTTGAGTGCAGCGTTGATCAATCGGAGAATAGTGAGAGTACCTTTAGAAGAGCAGTTATA
GAGAAGGCCGGGAAGTCCATTAATGGTGTAAGCATCAGAAACGTTAGGCCCTCCTCCCGTCTGCAGAGCTTGTTGAATCACACTCTCTGGGTTCACGTTAAACCACTCTC
CTGCACAAAAACCACGTCGCTTCACTCCATATCCAATCTAATCCATTATCCCAAATTCATTAATCAACTCACCCAAAACAATTGGGACTTCTTTGTGGGGCTTCTCAAAA
GGGTAAGATTCGTTCCGGCGAGGGAGGATTATAATTGGGCCGTAAATCGTAACCCTGAGCCACGAGATGTGGGCATGCCAAAGCAGACTTCCTCTCTGCCCCTTGAGGGT
GAAATTGTAAGTGTACGATTGGCCGGTTTGGATCGGGCATTGGGTCACGTAAGCCGGTCCGTCCGCCCAACCAGTTCGGAGCTGGCGGACGCCGTGCCAGTGGATGGTGA
CATTCTCGGCCACGTGGTTGGTGACCTTGATCAGGACTCGGTCGCCTTCTCTAGCCACTAA
Protein sequenceShow/hide protein sequence
MEDSDSGGIVESALAGEVRASGHEESGINGEIGIGFEKDVGGLARAEQYDVGLEGLDVGGVDIDDGEGVVGDAEEKFIVECSVDQSENSESTFRRAVIEKAGKSINGVSI
RNVRPSSRLQSLLNHTLWVHVKPLSCTKTTSLHSISNLIHYPKFINQLTQNNWDFFVGLLKRVRFVPAREDYNWAVNRNPEPRDVGMPKQTSSLPLEGEIVSVRLAGLDR
ALGHVSRSVRPTSSELADAVPVDGDILGHVVGDLDQDSVAFSSH