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CcUC10G206580 (gene) of Watermelon (PI 537277) v1 genome

Gene IDCcUC10G206580
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
Description(Dimethylallyl)adenosine tRNAmethylthiotransferase MiaB
Genome locationCicolChr10:33573435..33577087
RNA-Seq ExpressionCcUC10G206580
SyntenyCcUC10G206580
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GER35163.1 (Dimethylallyl)adenosine tRNAmethylthiotransferase MiaB [Striga asiatica]6.3e-1434.33Show/hide
Query:  MLVSCITNSTAALYGSTATFVPLLTIKFFG-----GVPAHANQVNYK-------------------VVQQPRIIR---ALTRPIPPARQQPQPHREKESP
        MLV C T ST AL G+T TFVP  TI  FG     G+      V+ +                   VV + R  R    LT  +  AR  P+PHRE++  
Subjt:  MLVSCITNSTAALYGSTATFVPLLTIKFFG-----GVPAHANQVNYK-------------------VVQQPRIIR---ALTRPIPPARQQPQPHREKESP

Query:  INPRRNFRRKFGIRQAPNLPIKLDGKTRVIEPGEDRFRFCGFVFEEAGDGGVVKG-------------GGRRGVGPGGDEKRGIGSYVHGLSWSDQNDVG
        I+   + RR+ G+ +A              EP            E+A DGGVV+              GG  GVG G +E  G      GL+W D+ DV 
Subjt:  INPRRNFRRKFGIRQAPNLPIKLDGKTRVIEPGEDRFRFCGFVFEEAGDGGVVKG-------------GGRRGVGPGGDEKRGIGSYVHGLSWSDQNDVG

Query:  FEGLDVNGVGFDDGEGVVGDAEEELVVECGIDQSEFLTKYDGNFFKRLRKRVR---------LMSFWE
         EGL V+GVG  D +GV G+AEEELVV+  +DQ+E +       F R+R R R         L+ FWE
Subjt:  FEGLDVNGVGFDDGEGVVGDAEEELVVECGIDQSEFLTKYDGNFFKRLRKRVR---------LMSFWE

RWW25229.1 hypothetical protein GW17_00010437 [Ensete ventricosum]5.7e-0746.97Show/hide
Query:  RKLLIGQFSVLYDPGHFQPPTGMNFQVAVHQPSPRIISNEPDRHPAAGRDPDGVPLSRIGEVEFGR
        R+ L G  SVL+D  H QPP  ++ +VA+H+P+  I+ +EPDR P++G D DGV + RI +VE  R
Subjt:  RKLLIGQFSVLYDPGHFQPPTGMNFQVAVHQPSPRIISNEPDRHPAAGRDPDGVPLSRIGEVEFGR

RWW56383.1 hypothetical protein BHE74_00036930 [Ensete ventricosum]1.7e-0646.97Show/hide
Query:  RKLLIGQFSVLYDPGHFQPPTGMNFQVAVHQPSPRIISNEPDRHPAAGRDPDGVPLSRIGEVEFGR
        R+ L G  SVL D  H QPP  ++ +VA+H+P+  I+ +EPDR P++G D DGV + RI +VE  R
Subjt:  RKLLIGQFSVLYDPGHFQPPTGMNFQVAVHQPSPRIISNEPDRHPAAGRDPDGVPLSRIGEVEFGR

RZS12601.1 hypothetical protein BHM03_00044067 [Ensete ventricosum]1.7e-0646.97Show/hide
Query:  RKLLIGQFSVLYDPGHFQPPTGMNFQVAVHQPSPRIISNEPDRHPAAGRDPDGVPLSRIGEVEFGR
        R+ L G  SVL D  H QPP  ++ +VA+H+P+  I+ +EPDR P++G D DGV + RI +VE  R
Subjt:  RKLLIGQFSVLYDPGHFQPPTGMNFQVAVHQPSPRIISNEPDRHPAAGRDPDGVPLSRIGEVEFGR

THU48287.1 hypothetical protein C4D60_Mb09t24650 [Musa balbisiana]1.7e-1138.56Show/hide
Query:  FRQIGRRRRKLLIGQFSVLYDPGHFQPPTGMNFQVAVHQP-----------------SPRIISNE-------------PDRHPAAGRDPDGVPLSRIGEV
        FR+I R RR+LL+ +FSV   P H Q P  ++  V VH+P                 + R +S                 ++  A + P G P   +   
Subjt:  FRQIGRRRRKLLIGQFSVLYDPGHFQPPTGMNFQVAVHQP-----------------SPRIISNE-------------PDRHPAAGRDPDGVPLSRIGEV

Query:  EFGRKLK-PCKWSGWLSGVTMLVSCITNSTAALYGSTATFVPLLTIKFFGGVP
            KL      SGWLS   MLVSCITNST AL GST +FVPLLTI  FGGVP
Subjt:  EFGRKLK-PCKWSGWLSGVTMLVSCITNSTAALYGSTATFVPLLTIKFFGGVP

TrEMBL top hitse value%identityAlignment
A0A444FRM1 Uncharacterized protein2.8e-0746.97Show/hide
Query:  RKLLIGQFSVLYDPGHFQPPTGMNFQVAVHQPSPRIISNEPDRHPAAGRDPDGVPLSRIGEVEFGR
        R+ L G  SVL+D  H QPP  ++ +VA+H+P+  I+ +EPDR P++G D DGV + RI +VE  R
Subjt:  RKLLIGQFSVLYDPGHFQPPTGMNFQVAVHQPSPRIISNEPDRHPAAGRDPDGVPLSRIGEVEFGR

A0A4S8IIU1 Uncharacterized protein8.3e-1238.56Show/hide
Query:  FRQIGRRRRKLLIGQFSVLYDPGHFQPPTGMNFQVAVHQP-----------------SPRIISNE-------------PDRHPAAGRDPDGVPLSRIGEV
        FR+I R RR+LL+ +FSV   P H Q P  ++  V VH+P                 + R +S                 ++  A + P G P   +   
Subjt:  FRQIGRRRRKLLIGQFSVLYDPGHFQPPTGMNFQVAVHQP-----------------SPRIISNE-------------PDRHPAAGRDPDGVPLSRIGEV

Query:  EFGRKLK-PCKWSGWLSGVTMLVSCITNSTAALYGSTATFVPLLTIKFFGGVP
            KL      SGWLS   MLVSCITNST AL GST +FVPLLTI  FGGVP
Subjt:  EFGRKLK-PCKWSGWLSGVTMLVSCITNSTAALYGSTATFVPLLTIKFFGGVP

A0A4V4H588 WD_REPEATS_REGION domain-containing protein1.1e-0643.84Show/hide
Query:  QIGRRRRKLLIGQFSVLYDPGHFQPPTGMNFQVAVHQPSPRIISNEPDRHPAAGRDPDGVPLSRIGEVEFGRK
        QI    RK L G  SVL+D  H QPP  ++ +VA+H+P+  I+ +EPDR P++G D D V + R+ +VE  R+
Subjt:  QIGRRRRKLLIGQFSVLYDPGHFQPPTGMNFQVAVHQPSPRIISNEPDRHPAAGRDPDGVPLSRIGEVEFGRK

A0A5A7PQL4 (Dimethylallyl)adenosine tRNAmethylthiotransferase MiaB3.1e-1434.33Show/hide
Query:  MLVSCITNSTAALYGSTATFVPLLTIKFFG-----GVPAHANQVNYK-------------------VVQQPRIIR---ALTRPIPPARQQPQPHREKESP
        MLV C T ST AL G+T TFVP  TI  FG     G+      V+ +                   VV + R  R    LT  +  AR  P+PHRE++  
Subjt:  MLVSCITNSTAALYGSTATFVPLLTIKFFG-----GVPAHANQVNYK-------------------VVQQPRIIR---ALTRPIPPARQQPQPHREKESP

Query:  INPRRNFRRKFGIRQAPNLPIKLDGKTRVIEPGEDRFRFCGFVFEEAGDGGVVKG-------------GGRRGVGPGGDEKRGIGSYVHGLSWSDQNDVG
        I+   + RR+ G+ +A              EP            E+A DGGVV+              GG  GVG G +E  G      GL+W D+ DV 
Subjt:  INPRRNFRRKFGIRQAPNLPIKLDGKTRVIEPGEDRFRFCGFVFEEAGDGGVVKG-------------GGRRGVGPGGDEKRGIGSYVHGLSWSDQNDVG

Query:  FEGLDVNGVGFDDGEGVVGDAEEELVVECGIDQSEFLTKYDGNFFKRLRKRVR---------LMSFWE
         EGL V+GVG  D +GV G+AEEELVV+  +DQ+E +       F R+R R R         L+ FWE
Subjt:  FEGLDVNGVGFDDGEGVVGDAEEELVVECGIDQSEFLTKYDGNFFKRLRKRVR---------LMSFWE

A0A7J0GJJ4 Laccase 179.9e-0540Show/hide
Query:  FCGF-VFEEAGDGGVVKGG----------GRRGVGPGGDEKRGIGSYVHGLSWSDQNDVGFEGLDVNGVGFDDGEGVVGDAEEELVVECGIDQSE
        F GF +FE +G+G +V+               GV  GG    G   ++ GL+WSD N V  EG D++GVGF D  GVVG+AEEE +++  +D+ E
Subjt:  FCGF-VFEEAGDGGVVKGG----------GRRGVGPGGDEKRGIGSYVHGLSWSDQNDVGFEGLDVNGVGFDDGEGVVGDAEEELVVECGIDQSE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAACATTTCGGCAGATCGGAAGGCGGCGGCGGAAGCTTCTGATTGGGCAATTTTCCGTCCTGTACGATCCAGGCCATTTTCAACCCCCAACTGGTATGAACTTCCA
AGTGGCAGTGCATCAACCAAGCCCCCGGATTATCAGCAACGAACCGGATCGCCACCCAGCCGCCGGAAGGGACCCCGACGGTGTTCCTCTCAGCCGGATCGGCGAGGTTG
AATTTGGCCGGAAATTGAAGCCGTGCAAGTGGAGCGGATGGCTCTCCGGTGTCACGATGCTCGTGTCCTGCATTACTAATTCCACGGCGGCGTTGTACGGCAGCACCGCC
ACCTTCGTTCCGCTACTCACCATCAAGTTCTTCGGCGGCGTGCCTGCACACGCCAACCAAGTAAATTACAAAGTTGTCCAACAGCCTCGTATTATTCGGGCCTTGACAAG
ACCGATTCCTCCGGCACGGCAGCAACCCCAACCCCACCGTGAAAAAGAATCTCCGATCAACCCTCGTCGGAACTTTCGCCGGAAATTTGGAATTCGCCAAGCTCCTAATC
TTCCCATTAAATTGGATGGAAAAACTCGTGTCATTGAACCGGGGGAGGACCGGTTTAGATTTTGTGGTTTCGTATTCGAGGAGGCCGGTGACGGTGGTGTTGTCAAAGGC
GGCGGGCGCCGTGGCGTAGGGCCGGGCGGCGATGAGAAACGTGGCATTGGGAGCTACGTTCATGGTCTGTCCTGGAGTGATCAAAACGACGTCGGTTTTGAAGGGCTTGA
CGTAAACGGCGTCGGCTTCGACGACGGTGAGGGTGTGGTTGGCGATGCTGAAGAAGAGCTCGTCGTTGAGTGCGGCATTGATCAATCGGAATTTCTCACCAAATATGATG
GGAACTTCTTTAAAAGGCTGAGGAAAAGGGTAAGGCTGATGAGTTTTTGGGAGAATGATTATTGGGCCATACAAAGTGGATCTTAG
mRNA sequenceShow/hide mRNA sequence
ATGAAAACATTTCGGCAGATCGGAAGGCGGCGGCGGAAGCTTCTGATTGGGCAATTTTCCGTCCTGTACGATCCAGGCCATTTTCAACCCCCAACTGGTATGAACTTCCA
AGTGGCAGTGCATCAACCAAGCCCCCGGATTATCAGCAACGAACCGGATCGCCACCCAGCCGCCGGAAGGGACCCCGACGGTGTTCCTCTCAGCCGGATCGGCGAGGTTG
AATTTGGCCGGAAATTGAAGCCGTGCAAGTGGAGCGGATGGCTCTCCGGTGTCACGATGCTCGTGTCCTGCATTACTAATTCCACGGCGGCGTTGTACGGCAGCACCGCC
ACCTTCGTTCCGCTACTCACCATCAAGTTCTTCGGCGGCGTGCCTGCACACGCCAACCAAGTAAATTACAAAGTTGTCCAACAGCCTCGTATTATTCGGGCCTTGACAAG
ACCGATTCCTCCGGCACGGCAGCAACCCCAACCCCACCGTGAAAAAGAATCTCCGATCAACCCTCGTCGGAACTTTCGCCGGAAATTTGGAATTCGCCAAGCTCCTAATC
TTCCCATTAAATTGGATGGAAAAACTCGTGTCATTGAACCGGGGGAGGACCGGTTTAGATTTTGTGGTTTCGTATTCGAGGAGGCCGGTGACGGTGGTGTTGTCAAAGGC
GGCGGGCGCCGTGGCGTAGGGCCGGGCGGCGATGAGAAACGTGGCATTGGGAGCTACGTTCATGGTCTGTCCTGGAGTGATCAAAACGACGTCGGTTTTGAAGGGCTTGA
CGTAAACGGCGTCGGCTTCGACGACGGTGAGGGTGTGGTTGGCGATGCTGAAGAAGAGCTCGTCGTTGAGTGCGGCATTGATCAATCGGAATTTCTCACCAAATATGATG
GGAACTTCTTTAAAAGGCTGAGGAAAAGGGTAAGGCTGATGAGTTTTTGGGAGAATGATTATTGGGCCATACAAAGTGGATCTTAGCCATGAAATATGAGCATGCCAAAA
CAATGTCCCTCTCTGCCCACTCACTGTGAAGTTATACACATAGCTCTGCCCTGTTTGGATTGGGCATTGTGTCACGTACGCTGGCCCGTCCGCCCACCCGCTCCTCCGCT
GCCGTATTCCATGCCTTTCATTTTACATATATAAAGTTATTGTAGGTACCGTAATCTATTAGCTTAAACTTTAGAGATTGAGTATGGATGTTACCAATGTAGGGATATAT
TGTTTTGGACGTGGTTGACGACTTTGATTAAGACGCGGTCGCCTTCCCTAGCGATGATTCTCGGC
Protein sequenceShow/hide protein sequence
MKTFRQIGRRRRKLLIGQFSVLYDPGHFQPPTGMNFQVAVHQPSPRIISNEPDRHPAAGRDPDGVPLSRIGEVEFGRKLKPCKWSGWLSGVTMLVSCITNSTAALYGSTA
TFVPLLTIKFFGGVPAHANQVNYKVVQQPRIIRALTRPIPPARQQPQPHREKESPINPRRNFRRKFGIRQAPNLPIKLDGKTRVIEPGEDRFRFCGFVFEEAGDGGVVKG
GGRRGVGPGGDEKRGIGSYVHGLSWSDQNDVGFEGLDVNGVGFDDGEGVVGDAEEELVVECGIDQSEFLTKYDGNFFKRLRKRVRLMSFWENDYWAIQSGS