; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CcUC10G207900 (gene) of Watermelon (PI 537277) v1 genome

Gene IDCcUC10G207900
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionNon-specific lipid-transfer protein
Genome locationCicolChr10:34663613..34664573
RNA-Seq ExpressionCcUC10G207900
SyntenyCcUC10G207900
Gene Ontology termsGO:0006869 - lipid transport (biological process)
GO:0090378 - seed trichome elongation (biological process)
GO:0008289 - lipid binding (molecular function)
InterPro domainsIPR000528 - Plant non-specific lipid-transfer protein/Par allergen
IPR016140 - Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain
IPR036312 - Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7017187.1 hypothetical protein SDJN02_19049 [Cucurbita argyrosperma subsp. argyrosperma]1.4e-3567.24Show/hide
Query:  MERSMKVLMIVGVVMTMMVVGEAVVTCGSVASSVGPCISYLQGSSQGVPPACCSGIKSLKSQASTPIDRRTACTCLKNAANRIPGINYGLAAGLPGRCGV
        MERSMK+ +IVGVV+  MVVGEA +TCG+V +S+ PCI YL+  S GVP ACC+GI+SL SQAST +DRR ACTCLK+AAN I GIN+  A+ LP +CGV
Subjt:  MERSMKVLMIVGVVMTMMVVGEAVVTCGSVASSVGPCISYLQGSSQGVPPACCSGIKSLKSQASTPIDRRTACTCLKNAANRIPGINYGLAAGLPGRCGV

Query:  SIPYKISPSTDCSRVN
         IPYKISPSTDC++VN
Subjt:  SIPYKISPSTDCSRVN

XP_022935125.1 non-specific lipid-transfer protein 1-like [Cucurbita moschata]6.7e-3871.55Show/hide
Query:  MERSMKVLMIVGVVMTMMVVGEAVVTCGSVASSVGPCISYLQGSSQGVPPACCSGIKSLKSQASTPIDRRTACTCLKNAANRIPGINYGLAAGLPGRCGV
        MERSMK+ +IVGVV+  MVVGEA ++CG+VA SV PCISYL+  S GVP ACC+GI+SL SQAST +DRRTACTCLK+AAN I GIN+  A+ LP +CGV
Subjt:  MERSMKVLMIVGVVMTMMVVGEAVVTCGSVASSVGPCISYLQGSSQGVPPACCSGIKSLKSQASTPIDRRTACTCLKNAANRIPGINYGLAAGLPGRCGV

Query:  SIPYKISPSTDCSRVN
        SIPYKISPSTDCS+VN
Subjt:  SIPYKISPSTDCSRVN

XP_022982607.1 non-specific lipid-transfer protein 1-like [Cucurbita maxima]1.3e-3668.97Show/hide
Query:  MERSMKVLMIVGVVMTMMVVGEAVVTCGSVASSVGPCISYLQGSSQGVPPACCSGIKSLKSQASTPIDRRTACTCLKNAANRIPGINYGLAAGLPGRCGV
        MERSMK+ ++VGVV+  MVVGEA ++CG+VASSV PCI YL+  S G+P ACCSGI+SL SQAST  DRRTAC CLK+AAN + GINY  A+ LP +CGV
Subjt:  MERSMKVLMIVGVVMTMMVVGEAVVTCGSVASSVGPCISYLQGSSQGVPPACCSGIKSLKSQASTPIDRRTACTCLKNAANRIPGINYGLAAGLPGRCGV

Query:  SIPYKISPSTDCSRVN
        SIPYKISPSTDC++VN
Subjt:  SIPYKISPSTDCSRVN

XP_023528122.1 non-specific lipid-transfer protein 1-like [Cucurbita pepo subsp. pepo]1.1e-3770.69Show/hide
Query:  MERSMKVLMIVGVVMTMMVVGEAVVTCGSVASSVGPCISYLQGSSQGVPPACCSGIKSLKSQASTPIDRRTACTCLKNAANRIPGINYGLAAGLPGRCGV
        MERSMK+ +IVGVV+  MVVGEA +TCG+VASSV PCI YL+  S GVP ACC+GI+SL SQAST +DRRTACTCLK+AA+ IPGIN+  A+ LP +CGV
Subjt:  MERSMKVLMIVGVVMTMMVVGEAVVTCGSVASSVGPCISYLQGSSQGVPPACCSGIKSLKSQASTPIDRRTACTCLKNAANRIPGINYGLAAGLPGRCGV

Query:  SIPYKISPSTDCSRVN
         IPYKISPSTDC++VN
Subjt:  SIPYKISPSTDCSRVN

XP_038902996.1 non-specific lipid-transfer protein 1-like [Benincasa hispida]8.8e-3870.34Show/hide
Query:  MEMERSMKVLMIVGVVMTMMVVGEAVVTCGSVASSVGPCISYLQGSSQGVPPACCSGIKSLKSQASTPIDRRTACTCLKNAANRIPGINYGLAAGLPGRC
        MEMERSMKV+MIVGVVM  MVV EA ++CG+VA +VGPCI YL+  +   PPACC+G+++LKSQASTP DRR AC CLKNAAN I GI+ G AAGLP +C
Subjt:  MEMERSMKVLMIVGVVMTMMVVGEAVVTCGSVASSVGPCISYLQGSSQGVPPACCSGIKSLKSQASTPIDRRTACTCLKNAANRIPGINYGLAAGLPGRC

Query:  GVSIPYKISPSTDCSRVN
        GVSIPYKISP+TDC++VN
Subjt:  GVSIPYKISPSTDCSRVN

TrEMBL top hitse value%identityAlignment
A0A1S3B5F4 Non-specific lipid-transfer protein1.4e-3368.38Show/hide
Query:  MERSMKVLMIVGVVMTMMVV-GEAVVTCGSVASSVGPCISYLQGSSQGVPPACCSGIKSLKSQASTPIDRRTACTCLKNAANRIPGINYGLAAGLPGRCG
        ME  +K LMIVG+VM  MVV GEA VTCGSVA+++GPCI YL+  S  VP  CCSGI+SL  QA+T  DRRTAC CLK+AA  I GINY  AAGLPG+CG
Subjt:  MERSMKVLMIVGVVMTMMVV-GEAVVTCGSVASSVGPCISYLQGSSQGVPPACCSGIKSLKSQASTPIDRRTACTCLKNAANRIPGINYGLAAGLPGRCG

Query:  VSIPYKISPSTDCSRVN
        VSI Y ISP+TDCSRVN
Subjt:  VSIPYKISPSTDCSRVN

A0A5D3DMS3 Non-specific lipid-transfer protein1.4e-3368.38Show/hide
Query:  MERSMKVLMIVGVVMTMMVV-GEAVVTCGSVASSVGPCISYLQGSSQGVPPACCSGIKSLKSQASTPIDRRTACTCLKNAANRIPGINYGLAAGLPGRCG
        ME  +K LMIVG+VM  MVV GEA VTCGSVA+++GPCI YL+  S  VP  CCSGI+SL  QA+T  DRRTAC CLK+AA  I GINY  AAGLPG+CG
Subjt:  MERSMKVLMIVGVVMTMMVV-GEAVVTCGSVASSVGPCISYLQGSSQGVPPACCSGIKSLKSQASTPIDRRTACTCLKNAANRIPGINYGLAAGLPGRCG

Query:  VSIPYKISPSTDCSRVN
        VSI Y ISP+TDCSRVN
Subjt:  VSIPYKISPSTDCSRVN

A0A6J1F9Q5 Non-specific lipid-transfer protein3.2e-3871.55Show/hide
Query:  MERSMKVLMIVGVVMTMMVVGEAVVTCGSVASSVGPCISYLQGSSQGVPPACCSGIKSLKSQASTPIDRRTACTCLKNAANRIPGINYGLAAGLPGRCGV
        MERSMK+ +IVGVV+  MVVGEA ++CG+VA SV PCISYL+  S GVP ACC+GI+SL SQAST +DRRTACTCLK+AAN I GIN+  A+ LP +CGV
Subjt:  MERSMKVLMIVGVVMTMMVVGEAVVTCGSVASSVGPCISYLQGSSQGVPPACCSGIKSLKSQASTPIDRRTACTCLKNAANRIPGINYGLAAGLPGRCGV

Query:  SIPYKISPSTDCSRVN
        SIPYKISPSTDCS+VN
Subjt:  SIPYKISPSTDCSRVN

A0A6J1IX25 Non-specific lipid-transfer protein6.1e-3768.97Show/hide
Query:  MERSMKVLMIVGVVMTMMVVGEAVVTCGSVASSVGPCISYLQGSSQGVPPACCSGIKSLKSQASTPIDRRTACTCLKNAANRIPGINYGLAAGLPGRCGV
        MERSMK+ ++VGVV+  MVVGEA ++CG+VASSV PCI YL+  S G+P ACCSGI+SL SQAST  DRRTAC CLK+AAN + GINY  A+ LP +CGV
Subjt:  MERSMKVLMIVGVVMTMMVVGEAVVTCGSVASSVGPCISYLQGSSQGVPPACCSGIKSLKSQASTPIDRRTACTCLKNAANRIPGINYGLAAGLPGRCGV

Query:  SIPYKISPSTDCSRVN
        SIPYKISPSTDC++VN
Subjt:  SIPYKISPSTDCSRVN

A0A7N0ZQW0 Non-specific lipid-transfer protein4.3e-3065.14Show/hide
Query:  VLMIVGVVMTMMVVGEAVVTCGSVASSVGPCISYLQGSSQGVPPACCSGIKSLKSQASTPIDRRTACTCLKNAANRIPGINYGLAAGLPGRCGVSIPYKI
        V+++  +V +     EA VTCG+VASS+ PC+ YL+GS   VP ACCSGIKSL + AST  DR+TAC CLK+AA+ I GINYGLAAGLPG+CGVSIPYKI
Subjt:  VLMIVGVVMTMMVVGEAVVTCGSVASSVGPCISYLQGSSQGVPPACCSGIKSLKSQASTPIDRRTACTCLKNAANRIPGINYGLAAGLPGRCGVSIPYKI

Query:  SPSTDCSRV
        SPSTDC++V
Subjt:  SPSTDCSRV

SwissProt top hitse value%identityAlignment
P19656 Non-specific lipid-transfer protein5.5e-2754.21Show/hide
Query:  IVGVVMTMMVVGEAVVTCGSVASSVGPCISYLQGSSQGVPPACCSGIKSLKSQASTPIDRRTACTCLKNAANRIPGINYGLAAGLPGRCGVSIPYKISPS
        +V +V+      EA ++CG VAS++ PCISY +G   G    CCSG++SL + A T  DRR AC CLKNAA  + G+N G AA +P +CGVSIPY IS S
Subjt:  IVGVVMTMMVVGEAVVTCGSVASSVGPCISYLQGSSQGVPPACCSGIKSLKSQASTPIDRRTACTCLKNAANRIPGINYGLAAGLPGRCGVSIPYKISPS

Query:  TDCSRVN
        TDCSRVN
Subjt:  TDCSRVN

P85105 Non-specific lipid-transfer protein P54.2e-2760.87Show/hide
Query:  VTCGSVASSVGPCISYLQGSSQGVPPACCSGIKSLKSQASTPIDRRTACTCLKNAANRIPGINYGLAAGLPGRCGVSIPYKISPSTDCSRVN
        ++CG VA+ + PCI+YL+ S+  +P ACC+G+K+LK+ A+T  DRRTAC CL NA+  I G+N+GLAAGLPG+CGV+IPYKISPST+C +VN
Subjt:  VTCGSVASSVGPCISYLQGSSQGVPPACCSGIKSLKSQASTPIDRRTACTCLKNAANRIPGINYGLAAGLPGRCGVSIPYKISPSTDCSRVN

Q42762 Non-specific lipid-transfer protein5.5e-2758.41Show/hide
Query:  LMIVGVVMTMMVVG----EAVVTCGSVASSVGPCISYLQGSSQG-VPPACCSGIKSLKSQASTPIDRRTACTCLKNAANRIPGINYGLAAGLPGRCGVSI
        L +  VV+  MVVG    +  VT G V +S+ PCI+YL+GS  G VPP CC+GIKSL S A T   R+ AC C+K+AA  I GIN+GLA+GLPG+CGV+I
Subjt:  LMIVGVVMTMMVVG----EAVVTCGSVASSVGPCISYLQGSSQG-VPPACCSGIKSLKSQASTPIDRRTACTCLKNAANRIPGINYGLAAGLPGRCGVSI

Query:  PYKISPSTDCSRV
        PYKISPSTDC+ V
Subjt:  PYKISPSTDCSRV

Q43129 Non-specific lipid-transfer protein9.4e-2755.46Show/hide
Query:  MERSMKVLMIVGVVMTMMV---VGEAVVTCGSVASSVGPCISYLQGSSQG-VPPACCSGIKSLKSQASTPIDRRTACTCLKNAANRIPGINYGLAAGLPG
        M  SM + +   VV+ M+V   + +  VT G V +S+ PCI+YL+GS  G VPP CC+GIKSL S A T   R+ AC C+K+AA  I GIN+GLA+GLPG
Subjt:  MERSMKVLMIVGVVMTMMV---VGEAVVTCGSVASSVGPCISYLQGSSQG-VPPACCSGIKSLKSQASTPIDRRTACTCLKNAANRIPGINYGLAAGLPG

Query:  RCGVSIPYKISPSTDCSRV
        +CGV+IPYKISPSTDC+ V
Subjt:  RCGVSIPYKISPSTDCSRV

Q43194 Non-specific lipid-transfer protein 23.8e-2854.1Show/hide
Query:  MERSMKVLMIVGVVMTMMVV------GEAVVTCGSVASSVGPCISYLQGSSQGVPPACCSGIKSLKSQASTPIDRRTACTCLKNAANRIPGINYGLAAGL
        M RSMK+ + + VV     V       EA VTCG V+S++GPC+SY +G   G    CCSG++SL S A T  DRR AC CLKNAA  I G+N G AA +
Subjt:  MERSMKVLMIVGVVMTMMVV------GEAVVTCGSVASSVGPCISYLQGSSQGVPPACCSGIKSLKSQASTPIDRRTACTCLKNAANRIPGINYGLAAGL

Query:  PGRCGVSIPYKISPSTDCSRVN
        P +CGVSIPY IS STDCSRV+
Subjt:  PGRCGVSIPYKISPSTDCSRVN

Arabidopsis top hitse value%identityAlignment
AT2G38530.1 lipid transfer protein 24.1e-1742.74Show/hide
Query:  VLMIVGVVMTMMVV-----GEAVVTCGSVASSVGPCISYLQGSSQGVP--PACCSGIKSLKSQASTPIDRRTACTCLKNAANRI-PGINYGLAAGLPGRC
        V+ +  +V+  M+V       A+++CG+V  ++  CI+YL   ++G P    CC+G+ +LK+ AST  DR+ AC CL++AA  + PG+N   AAGLP  C
Subjt:  VLMIVGVVMTMMVV-----GEAVVTCGSVASSVGPCISYLQGSSQGVP--PACCSGIKSLKSQASTPIDRRTACTCLKNAANRI-PGINYGLAAGLPGRC

Query:  GVSIPYKISPSTDCSRV
         V+IPYKIS ST+C+ V
Subjt:  GVSIPYKISPSTDCSRV

AT2G38540.1 lipid transfer protein 15.1e-2047.27Show/hide
Query:  LMIVGVVMTMMVVGEAVVTCGSVASSVGPCISY-LQGSSQGVPPACCSGIKSLKSQASTPIDRRTACTCLKNAANRI-PGINYGLAAGLPGRCGVSIPYK
        L++  +++   +   A ++CGSV S++  CI Y LQG    +PPACCSG+K+L S A T  DR+ AC C++ AA  +  G+N G AAG+P  CGV+IPYK
Subjt:  LMIVGVVMTMMVVGEAVVTCGSVASSVGPCISY-LQGSSQGVPPACCSGIKSLKSQASTPIDRRTACTCLKNAANRI-PGINYGLAAGLPGRCGVSIPYK

Query:  ISPSTDCSRV
        IS ST+C  V
Subjt:  ISPSTDCSRV

AT3G51590.1 lipid transfer protein 123.1e-1743.4Show/hide
Query:  VVMTMMVVG--EAVVTCGSVASSVGPCISYLQGSSQGVPPACCSGIKSLKSQASTPIDRRTACTCLKNAANRIPGINYGLAAGLPGRCGVSIPYKISPST
        +V+T+ +    E+ + CG+V S++  C++YL  S   +P  CC G+KSL   A T  DR+  C CLK A   I G+N  L A LP  CGVSIPY IS ST
Subjt:  VVMTMMVVG--EAVVTCGSVASSVGPCISYLQGSSQGVPPACCSGIKSLKSQASTPIDRRTACTCLKNAANRIPGINYGLAAGLPGRCGVSIPYKISPST

Query:  DCSRVN
        +C  ++
Subjt:  DCSRVN

AT5G59310.1 lipid transfer protein 41.9e-2250.96Show/hide
Query:  VMTMMVVG--EAVVTCGSVASSVGPCISYLQGSSQGVPPACCSGIKSLKSQASTPIDRRTACTCLKNAANRIPGINYGLAAGLPGRCGVSIPYKISPSTD
        V+T+ +V   +A +TCG+VASS+ PC+ YL      VPP CC+G+K L   A T  DR+ AC CL++AA    G+N  LA+GLPG+CGVSIPY IS ST+
Subjt:  VMTMMVVG--EAVVTCGSVASSVGPCISYLQGSSQGVPPACCSGIKSLKSQASTPIDRRTACTCLKNAANRIPGINYGLAAGLPGRCGVSIPYKISPSTD

Query:  CSRV
        C+ +
Subjt:  CSRV

AT5G59320.1 lipid transfer protein 35.0e-2348.57Show/hide
Query:  VVMTMMVVG--EAVVTCGSVASSVGPCISYLQGSSQGVPPACCSGIKSLKSQASTPIDRRTACTCLKNAANRIPGINYGLAAGLPGRCGVSIPYKISPST
        +V+T+ +V   +A ++CG+VA S+ PC +YL      VPP+CC+G+K+L S A T  DR+ AC C+++ A  I G+N  LA+GLPG+CGVSIPY IS ST
Subjt:  VVMTMMVVG--EAVVTCGSVASSVGPCISYLQGSSQGVPPACCSGIKSLKSQASTPIDRRTACTCLKNAANRIPGINYGLAAGLPGRCGVSIPYKISPST

Query:  DCSRV
        +C+ +
Subjt:  DCSRV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGATGGAGAGGAGCATGAAGGTTTTGATGATTGTGGGAGTTGTGATGACGATGATGGTGGTGGGTGAAGCGGTTGTGACCTGCGGGTCAGTGGCTAGCTCG
GTGGGGCCTTGCATTTCATATTTGCAAGGCTCATCACAAGGTGTCCCACCAGCATGTTGCAGTGGGATTAAGTCTCTCAAGTCCCAAGCCTCCACCCCTATCGAT
CGCCGCACCGCTTGCACCTGTTTGAAGAATGCTGCCAACCGCATCCCTGGCATCAACTATGGCTTAGCCGCTGGTCTTCCCGGCAGGTGTGGCGTCAGCATTCCT
TACAAGATCAGCCCCAGCACCGACTGCTCCAGGGTGAACTAA
mRNA sequenceShow/hide mRNA sequence
CAACAACCACCCACCCTCCCTCCGGGTTGCGTCATAAATGCATGGGATGGGATGCAGTGTGAGGAGTTGGCTATATAAAGGGCGGCACCCGGAACGGTTTGATTC
ACAGAGACACAAACAGCAAAGAGAAACAAAAGGGAAAGAATTGAGTTAGTTAGAAGCAGAAGCATAGATTTAAAAATGGAGATGGAGAGGAGCATGAAGGTTTTG
ATGATTGTGGGAGTTGTGATGACGATGATGGTGGTGGGTGAAGCGGTTGTGACCTGCGGGTCAGTGGCTAGCTCGGTGGGGCCTTGCATTTCATATTTGCAAGGC
TCATCACAAGGTGTCCCACCAGCATGTTGCAGTGGGATTAAGTCTCTCAAGTCCCAAGCCTCCACCCCTATCGATCGCCGCACCGCTTGCACCTGTTTGAAGAAT
GCTGCCAACCGCATCCCTGGCATCAACTATGGCTTAGCCGCTGGTCTTCCCGGCAGGTGTGGCGTCAGCATTCCTTACAAGATCAGCCCCAGCACCGACTGCTCC
AGGGTGAACTAAGGAAGGATCCACCTCCCCCACAGCCATCTGCGTCTATAGTAATAATATCATATTTGTAGCGGTAGCTTTTTAAATTAAATACCATATTATGAA
ATGAATAAAAAAGCATGGGTGCTACGGTTTCTTCATAATTAATTCCCATGCCCCACTCTTCCCAACCTTATATCTTCTTCTTCTTCTTCTTCTTTATTTCTACTT
TGTAGTACTGTTGTGTGTATGAGATTCCAATGACTCCTCTCATTGTGAATTCCAAATATCATTATAATTCCAATAAACTATTTCCTCACTTTCTTCTACACTCTA
CTCTTCATTTCCTCACATCTTCCCCAATA
Protein sequenceShow/hide protein sequence
MEMERSMKVLMIVGVVMTMMVVGEAVVTCGSVASSVGPCISYLQGSSQGVPPACCSGIKSLKSQASTPIDRRTACTCLKNAANRIPGINYGLAAGLPGRCGVSIP
YKISPSTDCSRVN