; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CcUC11G210180 (gene) of Watermelon (PI 537277) v1 genome

Gene IDCcUC11G210180
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
Description60S ribosomal protein L31
Genome locationCicolChr11:2080145..2082072
RNA-Seq ExpressionCcUC11G210180
SyntenyCcUC11G210180
Gene Ontology termsGO:0002181 - cytoplasmic translation (biological process)
GO:0022625 - cytosolic large ribosomal subunit (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR000054 - Ribosomal protein L31e
IPR020052 - Ribosomal protein L31e, conserved site
IPR023621 - Ribosomal protein L31e domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAB1996412.1 hypothetical protein ES319_D13G229500v1 [Gossypium barbadense]3.5e-4192.78Show/hide
Query:  LYVEDTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIEEDD
        ++V  TFKKKAPKAIKEIR+FAEKAMGTKDVRVDVKLNKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVI++DD
Subjt:  LYVEDTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIEEDD

MBA0752557.1 hypothetical protein [Gossypium gossypioides]9.1e-4292.86Show/hide
Query:  VLYVEDTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIEEDD
        V++V  TFKKKAPKAIKEIR+FAEKAMGTKDVRVDVKLNKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVI++DD
Subjt:  VLYVEDTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIEEDD

MBA0816999.1 hypothetical protein [Gossypium harknessii]9.1e-4292.86Show/hide
Query:  VLYVEDTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIEEDD
        V++V  TFKKKAPKAIKEIR+FAEKAMGTKDVRVDVKLNKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVI++DD
Subjt:  VLYVEDTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIEEDD

XP_008459190.1 PREDICTED: 60S ribosomal protein L31 [Cucumis melo]2.6e-41100Show/hide
Query:  TFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIEEDD
        TFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIEEDD
Subjt:  TFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIEEDD

XP_012465111.1 PREDICTED: 60S ribosomal protein L31-like isoform X2 [Gossypium raimondii]5.9e-4192.78Show/hide
Query:  LYVEDTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIEEDD
        ++V  TFKKKAPKAIKEIR+FAEKAMGTKDVRVDVKLNKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVI++DD
Subjt:  LYVEDTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIEEDD

TrEMBL top hitse value%identityAlignment
A0A5D3CKL3 60S ribosomal protein L311.3e-41100Show/hide
Query:  TFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIEEDD
        TFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIEEDD
Subjt:  TFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIEEDD

A0A6J1G2V4 60S ribosomal protein L311.3e-41100Show/hide
Query:  TFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIEEDD
        TFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIEEDD
Subjt:  TFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIEEDD

A0A6J1KK05 60S ribosomal protein L311.3e-41100Show/hide
Query:  TFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIEEDD
        TFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIEEDD
Subjt:  TFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIEEDD

A0A7J9CVQ4 Uncharacterized protein (Fragment)4.4e-4292.86Show/hide
Query:  VLYVEDTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIEEDD
        V++V  TFKKKAPKAIKEIR+FAEKAMGTKDVRVDVKLNKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVI++DD
Subjt:  VLYVEDTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIEEDD

A0A7J9I4G3 Uncharacterized protein4.4e-4292.86Show/hide
Query:  VLYVEDTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIEEDD
        V++V  TFKKKAPKAIKEIR+FAEKAMGTKDVRVDVKLNKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVI++DD
Subjt:  VLYVEDTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIEEDD

SwissProt top hitse value%identityAlignment
P46290 60S ribosomal protein L311.0e-4091.3Show/hide
Query:  TFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIEEDD
        TFKKKAP AIKEIRKFA+KAMGTKDVRVDVKLNK IWSRGIRSVPRR+RVRIARKRNDDEDAKEELYSLVTVAEIPA+GLKGLGTK+IE++D
Subjt:  TFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIEEDD

P51420 60S ribosomal protein L31-31.2e-3990.22Show/hide
Query:  TFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIEEDD
        TFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNK IWS+GIR  PRRIRVR+ARKRNDDEDAKEE +SLVTVAEIPAEGL GLGTKVIEE+D
Subjt:  TFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIEEDD

Q9M573 60S ribosomal protein L315.2e-4091.3Show/hide
Query:  TFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIEEDD
        TFKKKAPKAIKEIRKFA+KAMGT DVRVDVKLNKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIP  GLKGLGT+VI+E++
Subjt:  TFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIEEDD

Q9MAV7 60S ribosomal protein L319.8e-3989.13Show/hide
Query:  TFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIEEDD
        TFKKKAP AIKEIRKFA+KAMGTKDVRVDVKLNK IWSRGIRSVPRR+RVRIARKRNDDEDAKEELYSLVTVA+IPA  LKGLG ++IEEDD
Subjt:  TFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIEEDD

Q9STR1 60S ribosomal protein L31-25.7e-3988.04Show/hide
Query:  TFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIEEDD
        TFKKKAPKAIKEIRKFAEK MGTKDVRVDVKLNK IWS+GIR  PRRIRVR+ARKRNDDEDAKEE +SLVTVAEIPAEGL GLGTK+IEE+D
Subjt:  TFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIEEDD

Arabidopsis top hitse value%identityAlignment
AT2G19740.1 Ribosomal protein L31e family protein4.5e-3970.97Show/hide
Query:  EKGGGGYQRVYYQPSQTPSWLLISHNVLYVEDTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYS
        EKG G  + V      T  + +  H  L+   TFKKKAP AIKEIRKFA KAMGTKDVRVDVKLNK IWS+GIR  PRRIRVR+ARKRNDDEDAKEE +S
Subjt:  EKGGGGYQRVYYQPSQTPSWLLISHNVLYVEDTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYS

Query:  LVTVAEIPAEGLKGLGTKVIEEDD
        LVTVAEIPAEGL GLGTKVIEE++
Subjt:  LVTVAEIPAEGLKGLGTKVIEEDD

AT4G26230.1 Ribosomal protein L31e family protein4.1e-4088.04Show/hide
Query:  TFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIEEDD
        TFKKKAPKAIKEIRKFAEK MGTKDVRVDVKLNK IWS+GIR  PRRIRVR+ARKRNDDEDAKEE +SLVTVAEIPAEGL GLGTK+IEE+D
Subjt:  TFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIEEDD

AT5G56710.1 Ribosomal protein L31e family protein8.2e-4190.22Show/hide
Query:  TFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIEEDD
        TFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNK IWS+GIR  PRRIRVR+ARKRNDDEDAKEE +SLVTVAEIPAEGL GLGTKVIEE+D
Subjt:  TFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIEEDD

AT5G56710.2 Ribosomal protein L31e family protein2.0e-1858.7Show/hide
Query:  TFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIEEDD
        TFKKKAPKAIKEIRKFAEKAMGTKDVRVD                                  EE +SLVTVAEIPAEGL GLGTKVIEE+D
Subjt:  TFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIEEDD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAACGTGTTTCTGAAGAGATTTAAAAATGGTGGAGAAGACCAAAGGGAGAAAGGAGGAGGTGGTTACCAGAGAGTATACTATCAACCTTCACAAACGCCTTCATGGCT
GCTGATTTCACATAATGTACTTTATGTGGAGGACACCTTTAAGAAGAAGGCTCCCAAGGCTATTAAGGAGATCAGGAAGTTTGCTGAGAAGGCCATGGGCACAAAGGATG
TGAGAGTGGATGTGAAGCTGAACAAGCATATTTGGAGCAGGGGAATTAGGAGTGTGCCCAGAAGAATCAGAGTTCGCATTGCTCGCAAGAGAAACGATGATGAAGATGCC
AAGGAAGAGTTGTACTCCCTCGTGACAGTTGCAGAAATCCCAGCAGAAGGACTGAAGGGACTTGGGACTAAAGTCATTGAGGAAGATGATTGA
mRNA sequenceShow/hide mRNA sequence
ATGAACGTGTTTCTGAAGAGATTTAAAAATGGTGGAGAAGACCAAAGGGAGAAAGGAGGAGGTGGTTACCAGAGAGTATACTATCAACCTTCACAAACGCCTTCATGGCT
GCTGATTTCACATAATGTACTTTATGTGGAGGACACCTTTAAGAAGAAGGCTCCCAAGGCTATTAAGGAGATCAGGAAGTTTGCTGAGAAGGCCATGGGCACAAAGGATG
TGAGAGTGGATGTGAAGCTGAACAAGCATATTTGGAGCAGGGGAATTAGGAGTGTGCCCAGAAGAATCAGAGTTCGCATTGCTCGCAAGAGAAACGATGATGAAGATGCC
AAGGAAGAGTTGTACTCCCTCGTGACAGTTGCAGAAATCCCAGCAGAAGGACTGAAGGGACTTGGGACTAAAGTCATTGAGGAAGATGATTGAGTTGTCACCTGTTTTTG
AGGGTAAGATGAGATTAGGTGCTTGTAGTTTTGATTTGTTGAATGAAAGAAGACTGTCATACTTAATTGTTGTCTTGGAGATTTTTTTTTGTTAAATTAACTCATAGTTC
GTGAACTTCCATATTATTAAGTTCAAATGTTTTTGGGTTACGTTGAGCAA
Protein sequenceShow/hide protein sequence
MNVFLKRFKNGGEDQREKGGGGYQRVYYQPSQTPSWLLISHNVLYVEDTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNKHIWSRGIRSVPRRIRVRIARKRNDDEDA
KEELYSLVTVAEIPAEGLKGLGTKVIEEDD