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CcUC11G210470 (gene) of Watermelon (PI 537277) v1 genome

Gene IDCcUC11G210470
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionE3 ubiquitin-protein ligase RING1-like
Genome locationCicolChr11:2347296..2347613
RNA-Seq ExpressionCcUC11G210470
SyntenyCcUC11G210470
Gene Ontology termsGO:0006511 - ubiquitin-dependent protein catabolic process (biological process)
GO:0016567 - protein ubiquitination (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0061630 - ubiquitin protein ligase activity (molecular function)
InterPro domainsIPR001841 - Zinc finger, RING-type
IPR013083 - Zinc finger, RING/FYVE/PHD-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6599476.1 E3 ubiquitin-protein ligase RING1-like protein, partial [Cucurbita argyrosperma subsp. sororia]1.9e-4786.67Show/hide
Query:  MAAAAVMAEATRNLPAAYPIEFLFDLDMVLSGADDFGCCQISTSDSLVANLPTVMADVCAVCLEDFRPDEGGKQIPCGHVYHESCISSWLTVGDCCPLCR
        MAA +V AE TRNL AAYPIEFLFDLDMVLSGADDFGCCQIS SDSLVA+LPTV+ADVCAVCLEDFRPDE GKQIPCGHVYHESCISSWL V +CCPLCR
Subjt:  MAAAAVMAEATRNLPAAYPIEFLFDLDMVLSGADDFGCCQISTSDSLVANLPTVMADVCAVCLEDFRPDEGGKQIPCGHVYHESCISSWLTVGDCCPLCR

Query:  CLVAG
        CL++G
Subjt:  CLVAG

KAG7030453.1 E3 ubiquitin-protein ligase RING1, partial [Cucurbita argyrosperma subsp. argyrosperma]1.9e-4786.67Show/hide
Query:  MAAAAVMAEATRNLPAAYPIEFLFDLDMVLSGADDFGCCQISTSDSLVANLPTVMADVCAVCLEDFRPDEGGKQIPCGHVYHESCISSWLTVGDCCPLCR
        MAA +V AE TRNL AAYPIEFLFDLDMVLSGADDFGCCQIS SDSLVA+LPTV+ADVCAVCLEDFRPDE GKQIPCGHVYHESCISSWL V +CCPLCR
Subjt:  MAAAAVMAEATRNLPAAYPIEFLFDLDMVLSGADDFGCCQISTSDSLVANLPTVMADVCAVCLEDFRPDEGGKQIPCGHVYHESCISSWLTVGDCCPLCR

Query:  CLVAG
        CL++G
Subjt:  CLVAG

XP_022946863.1 E3 ubiquitin-protein ligase RING1-like [Cucurbita moschata]8.3e-4887.62Show/hide
Query:  MAAAAVMAEATRNLPAAYPIEFLFDLDMVLSGADDFGCCQISTSDSLVANLPTVMADVCAVCLEDFRPDEGGKQIPCGHVYHESCISSWLTVGDCCPLCR
        MAA +V AE TRNL AAYPIEFLFDLDMVLSGADDFGCCQIS SDSLVA+LPTV+ADVCAVCLEDFRPDE GKQIPCGHVYHESCISSWL V +CCPLCR
Subjt:  MAAAAVMAEATRNLPAAYPIEFLFDLDMVLSGADDFGCCQISTSDSLVANLPTVMADVCAVCLEDFRPDEGGKQIPCGHVYHESCISSWLTVGDCCPLCR

Query:  CLVAG
        CL+AG
Subjt:  CLVAG

XP_023545409.1 E3 ubiquitin-protein ligase RING1-like [Cucurbita pepo subsp. pepo]2.4e-4786.67Show/hide
Query:  MAAAAVMAEATRNLPAAYPIEFLFDLDMVLSGADDFGCCQISTSDSLVANLPTVMADVCAVCLEDFRPDEGGKQIPCGHVYHESCISSWLTVGDCCPLCR
        MAA +V AE TRNL  AYPIEFLFDLDMVLSGADDFGCCQIS SDSLVA+LPTV+ADVCAVCLEDFRPDE GKQIPCGHVYHESCISSWL V +CCPLCR
Subjt:  MAAAAVMAEATRNLPAAYPIEFLFDLDMVLSGADDFGCCQISTSDSLVANLPTVMADVCAVCLEDFRPDEGGKQIPCGHVYHESCISSWLTVGDCCPLCR

Query:  CLVAG
        CL+AG
Subjt:  CLVAG

XP_038877422.1 E3 ubiquitin-protein ligase RNF181-like [Benincasa hispida]6.4e-4888.57Show/hide
Query:  MAAAAVMAEATRNLPAAYPIEFLFDLDMVLSGADDFGCCQISTSDSLVANLPTVMADVCAVCLEDFRPDEGGKQIPCGHVYHESCISSWLTVGDCCPLCR
        MAAAAVM E TRNLPA YPIEFLFDLDMVLSGADDFGCCQIS +DSLVA+LP V+ADVCAVCLEDF PDE GKQIPCGHVYHESCISSWLTV DCCPLCR
Subjt:  MAAAAVMAEATRNLPAAYPIEFLFDLDMVLSGADDFGCCQISTSDSLVANLPTVMADVCAVCLEDFRPDEGGKQIPCGHVYHESCISSWLTVGDCCPLCR

Query:  CLVAG
        C VAG
Subjt:  CLVAG

TrEMBL top hitse value%identityAlignment
A0A0A0LKR7 RING-type domain-containing protein1.9e-4583.81Show/hide
Query:  MAAAAVMAEATRNLPAAYPIEFLFDLDMVLSGADDFGCCQISTSDSLVANLPTVMADVCAVCLEDFRPDEGGKQIPCGHVYHESCISSWLTVGDCCPLCR
        MAAAAVM E T NLP+ YPIEFLFDLD VLSGADD GCCQI+ SDS VA+ PTV+ADVCAVCL+DF PDE GKQIPCGHVYHESCISSWLTV DCCPLCR
Subjt:  MAAAAVMAEATRNLPAAYPIEFLFDLDMVLSGADDFGCCQISTSDSLVANLPTVMADVCAVCLEDFRPDEGGKQIPCGHVYHESCISSWLTVGDCCPLCR

Query:  CLVAG
        CLVAG
Subjt:  CLVAG

A0A1S4DZX3 RING-H2 finger protein ATL5-like3.9e-4382.08Show/hide
Query:  MAAAAVMAEATRNLPAAYPIEFLFDLDMVLSGADDFGC-CQISTSDSLVANLPTVMADVCAVCLEDFRPDEGGKQIPCGHVYHESCISSWLTVGDCCPLC
        MAAAAVM E T  LP+ YPIEFLFDLD VLSGADD  C CQI+ SDS VA+ PTV+ADVCAVCL+DFRPDE GKQIPCGHVYHESCISSWLTV DCCPLC
Subjt:  MAAAAVMAEATRNLPAAYPIEFLFDLDMVLSGADDFGC-CQISTSDSLVANLPTVMADVCAVCLEDFRPDEGGKQIPCGHVYHESCISSWLTVGDCCPLC

Query:  RCLVAG
        RCLVAG
Subjt:  RCLVAG

A0A5A7V2P4 RING-H2 finger protein ATL5-like3.9e-4382.08Show/hide
Query:  MAAAAVMAEATRNLPAAYPIEFLFDLDMVLSGADDFGC-CQISTSDSLVANLPTVMADVCAVCLEDFRPDEGGKQIPCGHVYHESCISSWLTVGDCCPLC
        MAAAAVM E T  LP+ YPIEFLFDLD VLSGADD  C CQI+ SDS VA+ PTV+ADVCAVCL+DFRPDE GKQIPCGHVYHESCISSWLTV DCCPLC
Subjt:  MAAAAVMAEATRNLPAAYPIEFLFDLDMVLSGADDFGC-CQISTSDSLVANLPTVMADVCAVCLEDFRPDEGGKQIPCGHVYHESCISSWLTVGDCCPLC

Query:  RCLVAG
        RCLVAG
Subjt:  RCLVAG

A0A6J1DM93 E3 ubiquitin-protein ligase RHA1B-like8.1e-4178.64Show/hide
Query:  MAAAAVMAEATRNLPAAYPIEFLFDLDMVLSGADDFGCCQI---STSDSLVANLPTVMADVCAVCLEDFRPDEGGKQIPCGHVYHESCISSWLTVGDCCP
        MAA AV+AE TRNL AAYP+E LFDLDMVLSG DDFGCC +   ++SDS+VA+LPTV+ADVCAVC EDFR DEGGKQIPCGHVYHE CISSWL V DCCP
Subjt:  MAAAAVMAEATRNLPAAYPIEFLFDLDMVLSGADDFGCCQI---STSDSLVANLPTVMADVCAVCLEDFRPDEGGKQIPCGHVYHESCISSWLTVGDCCP

Query:  LCR
        LCR
Subjt:  LCR

A0A6J1G511 E3 ubiquitin-protein ligase RING1-like4.0e-4887.62Show/hide
Query:  MAAAAVMAEATRNLPAAYPIEFLFDLDMVLSGADDFGCCQISTSDSLVANLPTVMADVCAVCLEDFRPDEGGKQIPCGHVYHESCISSWLTVGDCCPLCR
        MAA +V AE TRNL AAYPIEFLFDLDMVLSGADDFGCCQIS SDSLVA+LPTV+ADVCAVCLEDFRPDE GKQIPCGHVYHESCISSWL V +CCPLCR
Subjt:  MAAAAVMAEATRNLPAAYPIEFLFDLDMVLSGADDFGCCQISTSDSLVANLPTVMADVCAVCLEDFRPDEGGKQIPCGHVYHESCISSWLTVGDCCPLCR

Query:  CLVAG
        CL+AG
Subjt:  CLVAG

SwissProt top hitse value%identityAlignment
P0CH30 E3 ubiquitin-protein ligase RING13.0e-0847.62Show/hide
Query:  CAVCLEDFRPDEGGKQIPCGHVYHESCISSWLTVGDCCPLCR
        CAVC++DF      KQ+PC H+YH+ C+  WL + + CP+CR
Subjt:  CAVCLEDFRPDEGGKQIPCGHVYHESCISSWLTVGDCCPLCR

Q91YL2 E3 ubiquitin-protein ligase RNF1263.9e-0846.81Show/hide
Query:  CAVCLEDFRPDEGGKQIPCGHVYHESCISSWLTVGDCCPLCRCLVAG
        C VC ED+   E  +Q+PC H++H+SCI  WL   D CP+CR  + G
Subjt:  CAVCLEDFRPDEGGKQIPCGHVYHESCISSWLTVGDCCPLCRCLVAG

Q9D0C1 E3 ubiquitin-protein ligase RNF1152.3e-0840.98Show/hide
Query:  VANLPTVMAD--------VCAVCLEDFRPDEGGKQIPCGHVYHESCISSWLTVGDCCPLCR
        + +LPTV            C VC ED+  +E  +Q+PC H +H SCI  WL + D CP+CR
Subjt:  VANLPTVMAD--------VCAVCLEDFRPDEGGKQIPCGHVYHESCISSWLTVGDCCPLCR

Q9VHI7 E3 ubiquitin-protein ligase Iruka3.5e-0935.14Show/hide
Query:  MVLSGADDFGCCQISTSDSLVANLPTVMADV-CAVCLEDFRPDEGGKQIPCGHVYHESCISSWLTVGDCCPLCR
        M  SG       +I+   ++  N   V   + C++C +DF+ DE  +++PC H+YHE+CI  WL +   CP+CR
Subjt:  MVLSGADDFGCCQISTSDSLVANLPTVMADV-CAVCLEDFRPDEGGKQIPCGHVYHESCISSWLTVGDCCPLCR

Q9Y4L5 E3 ubiquitin-protein ligase RNF1151.0e-0842.62Show/hide
Query:  VANLPTV--------MADVCAVCLEDFRPDEGGKQIPCGHVYHESCISSWLTVGDCCPLCR
        + +LPTV        M   C VC ED+  +E  +Q+PC H +H SCI  WL + D CP+CR
Subjt:  VANLPTV--------MADVCAVCLEDFRPDEGGKQIPCGHVYHESCISSWLTVGDCCPLCR

Arabidopsis top hitse value%identityAlignment
AT1G68180.1 RING/U-box superfamily protein5.1e-1144.44Show/hide
Query:  LVANLPTVMADVCAVCLEDFRPDEGGKQIPCGHVYHESCISSWLTVGDCCPLCR
        ++ +   V   VCA+C E+F   E GK++ C H+YH SCI SWL + + CP+CR
Subjt:  LVANLPTVMADVCAVCLEDFRPDEGGKQIPCGHVYHESCISSWLTVGDCCPLCR

AT2G44330.1 RING/U-box superfamily protein5.6e-1052.38Show/hide
Query:  CAVCLEDFRPDEGGKQIPCGHVYHESCISSWLTVGDCCPLCR
        CA+C EDF   E  +++PC H+YH  CI  WLT  + CPLCR
Subjt:  CAVCLEDFRPDEGGKQIPCGHVYHESCISSWLTVGDCCPLCR

AT3G19950.1 RING/U-box superfamily protein2.8e-0937.88Show/hide
Query:  SDSLVANLPTVMA---------DVCAVCLEDFRPDEGGKQIPCGHVYHESCISSWLTVGDCCPLCR
        S S +  LPTV           + CAVC+++F      KQ+PC HV+H+ C+  WL + + CP+CR
Subjt:  SDSLVANLPTVMA---------DVCAVCLEDFRPDEGGKQIPCGHVYHESCISSWLTVGDCCPLCR

AT3G30460.1 RING/U-box superfamily protein4.8e-0948.84Show/hide
Query:  VCAVCLEDFRPDEGGKQIPCGHVYHESCISSWLTVGDCCPLCR
        VCA+C E+   +E   ++PC H YH+ CIS+WL+  + CPLCR
Subjt:  VCAVCLEDFRPDEGGKQIPCGHVYHESCISSWLTVGDCCPLCR

AT3G60080.1 RING/U-box superfamily protein5.6e-1038.67Show/hide
Query:  VLSGADDFGCCQISTSDSLVANLPTVMAD---VCAVCLEDFRPDEGGKQIPCGHVYHESCISSWLTVGDCCPLCR
        +L  +D      I  S SL+ +      D   +CAVC EDF   E  +++PC H+YH  CI  WL+  + CPLCR
Subjt:  VLSGADDFGCCQISTSDSLVANLPTVMAD---VCAVCLEDFRPDEGGKQIPCGHVYHESCISSWLTVGDCCPLCR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGCCGCTGCTGTGATGGCTGAGGCGACAAGAAACTTACCGGCGGCATATCCAATCGAATTTCTGTTTGATCTGGACATGGTTCTGTCCGGTGCCGACGACTTTGG
TTGCTGCCAGATCAGCACTTCCGATTCACTTGTGGCGAATTTGCCGACGGTGATGGCCGATGTTTGTGCCGTTTGTTTAGAGGATTTCCGGCCAGATGAGGGCGGAAAAC
AAATCCCCTGCGGACACGTGTACCATGAATCTTGTATTTCCTCTTGGCTTACCGTCGGCGACTGTTGCCCTCTCTGTCGGTGCCTCGTCGCCGGCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCTGCCGCTGCTGTGATGGCTGAGGCGACAAGAAACTTACCGGCGGCATATCCAATCGAATTTCTGTTTGATCTGGACATGGTTCTGTCCGGTGCCGACGACTTTGG
TTGCTGCCAGATCAGCACTTCCGATTCACTTGTGGCGAATTTGCCGACGGTGATGGCCGATGTTTGTGCCGTTTGTTTAGAGGATTTCCGGCCAGATGAGGGCGGAAAAC
AAATCCCCTGCGGACACGTGTACCATGAATCTTGTATTTCCTCTTGGCTTACCGTCGGCGACTGTTGCCCTCTCTGTCGGTGCCTCGTCGCCGGCTAA
Protein sequenceShow/hide protein sequence
MAAAAVMAEATRNLPAAYPIEFLFDLDMVLSGADDFGCCQISTSDSLVANLPTVMADVCAVCLEDFRPDEGGKQIPCGHVYHESCISSWLTVGDCCPLCRCLVAG