; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CcUC11G210810 (gene) of Watermelon (PI 537277) v1 genome

Gene IDCcUC11G210810
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
Descriptionmultiprotein-bridging factor 1c
Genome locationCicolChr11:2702748..2703185
RNA-Seq ExpressionCcUC11G210810
SyntenyCcUC11G210810
Gene Ontology termsGO:0009408 - response to heat (biological process)
GO:0009414 - response to water deprivation (biological process)
GO:0009737 - response to abscisic acid (biological process)
GO:0045893 - positive regulation of transcription, DNA-templated (biological process)
GO:0005730 - nucleolus (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0003713 - transcription coactivator activity (molecular function)
InterPro domainsIPR001387 - Cro/C1-type helix-turn-helix domain
IPR010982 - Lambda repressor-like, DNA-binding domain superfamily
IPR013729 - Multiprotein bridging factor 1, N-terminal


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0061560.1 multiprotein-bridging factor 1c [Cucumis melo var. makuwa]5.7e-6392.41Show/hide
Query:  MPSRYPGALAQDWEPVVLHKAKPKAETLRDPKAVNQAIRSGAAVQTVKKFDAGSNKKAAAAPVNARKLDEGTEPAALDRVAAEVRLTIQKARVEKKMSQA
        MPSR+PGAL+QDWEPVVLHKAKPKA+ LRDPKAVNQAIRSGA VQTVKKFDAG NKK AAAPVNARKLDEGTEPAALDRV  EVR  IQKARVEKKMSQA
Subjt:  MPSRYPGALAQDWEPVVLHKAKPKAETLRDPKAVNQAIRSGAAVQTVKKFDAGSNKKAAAAPVNARKLDEGTEPAALDRVAAEVRLTIQKARVEKKMSQA

Query:  ELAKQINERTQVVQEYENGKAVPNQAVLAKMEKVLGVKLRGRSGK
        ELAKQINERTQVVQEYENGKAVPNQAVLAKMEKVLGVKLRGRSGK
Subjt:  ELAKQINERTQVVQEYENGKAVPNQAVLAKMEKVLGVKLRGRSGK

TYK10712.1 multiprotein-bridging factor 1c [Cucumis melo var. makuwa]5.7e-6392.41Show/hide
Query:  MPSRYPGALAQDWEPVVLHKAKPKAETLRDPKAVNQAIRSGAAVQTVKKFDAGSNKKAAAAPVNARKLDEGTEPAALDRVAAEVRLTIQKARVEKKMSQA
        MPSR+PGAL+QDWEPVVLHKAKPKA+ LRDPKAVNQAIRSGA VQTVKKFDAG NKK AAAPVNARKLDEGTEPAALDRV  EVR  IQKARVEKKMSQA
Subjt:  MPSRYPGALAQDWEPVVLHKAKPKAETLRDPKAVNQAIRSGAAVQTVKKFDAGSNKKAAAAPVNARKLDEGTEPAALDRVAAEVRLTIQKARVEKKMSQA

Query:  ELAKQINERTQVVQEYENGKAVPNQAVLAKMEKVLGVKLRGRSGK
        ELAKQINERTQVVQEYENGKAVPNQAVLAKMEKVLGVKLRGRSGK
Subjt:  ELAKQINERTQVVQEYENGKAVPNQAVLAKMEKVLGVKLRGRSGK

XP_004139340.1 multiprotein-bridging factor 1c [Cucumis sativus]3.7e-6291.03Show/hide
Query:  MPSRYPGALAQDWEPVVLHKAKPKAETLRDPKAVNQAIRSGAAVQTVKKFDAGSNKKAAAAPVNARKLDEGTEPAALDRVAAEVRLTIQKARVEKKMSQA
        MPSR+PGAL+QDWEPVVLHKAKPKA+ LRDPKAVNQAIRSGA VQTVKKFDAG NKK  AAPVNARKL+EGTEPAALDRVA EVR  IQKAR+EKKMSQA
Subjt:  MPSRYPGALAQDWEPVVLHKAKPKAETLRDPKAVNQAIRSGAAVQTVKKFDAGSNKKAAAAPVNARKLDEGTEPAALDRVAAEVRLTIQKARVEKKMSQA

Query:  ELAKQINERTQVVQEYENGKAVPNQAVLAKMEKVLGVKLRGRSGK
        ELAKQINERTQVVQEYENGKAVPNQAVLAKMEKVLGVKLRGRSGK
Subjt:  ELAKQINERTQVVQEYENGKAVPNQAVLAKMEKVLGVKLRGRSGK

XP_008458302.1 PREDICTED: multiprotein-bridging factor 1c [Cucumis melo]5.7e-6392.41Show/hide
Query:  MPSRYPGALAQDWEPVVLHKAKPKAETLRDPKAVNQAIRSGAAVQTVKKFDAGSNKKAAAAPVNARKLDEGTEPAALDRVAAEVRLTIQKARVEKKMSQA
        MPSR+PGAL+QDWEPVVLHKAKPKA+ LRDPKAVNQAIRSGA VQTVKKFDAG NKK AAAPVNARKLDEGTEPAALDRV  EVR  IQKARVEKKMSQA
Subjt:  MPSRYPGALAQDWEPVVLHKAKPKAETLRDPKAVNQAIRSGAAVQTVKKFDAGSNKKAAAAPVNARKLDEGTEPAALDRVAAEVRLTIQKARVEKKMSQA

Query:  ELAKQINERTQVVQEYENGKAVPNQAVLAKMEKVLGVKLRGRSGK
        ELAKQINERTQVVQEYENGKAVPNQAVLAKMEKVLGVKLRGRSGK
Subjt:  ELAKQINERTQVVQEYENGKAVPNQAVLAKMEKVLGVKLRGRSGK

XP_038890461.1 multiprotein-bridging factor 1c [Benincasa hispida]6.1e-6595.17Show/hide
Query:  MPSRYPGALAQDWEPVVLHKAKPKAETLRDPKAVNQAIRSGAAVQTVKKFDAGSNKKAAAAPVNARKLDEGTEPAALDRVAAEVRLTIQKARVEKKMSQA
        MPSR+PGA+AQDWEPVVLHKAKPKA+ LRDPKAVNQAIRSGAAVQTVKKFDAGSNKKAAAAPVNARKLDE TEPAALDRVAAEVRL IQKAR+EKKMSQA
Subjt:  MPSRYPGALAQDWEPVVLHKAKPKAETLRDPKAVNQAIRSGAAVQTVKKFDAGSNKKAAAAPVNARKLDEGTEPAALDRVAAEVRLTIQKARVEKKMSQA

Query:  ELAKQINERTQVVQEYENGKAVPNQAVLAKMEKVLGVKLRGRSGK
        ELAKQINERTQVVQEYENGKAVPNQAVLAKMEKVLGVKLRGRSGK
Subjt:  ELAKQINERTQVVQEYENGKAVPNQAVLAKMEKVLGVKLRGRSGK

TrEMBL top hitse value%identityAlignment
A0A0A0LFV9 HTH cro/C1-type domain-containing protein1.8e-6291.03Show/hide
Query:  MPSRYPGALAQDWEPVVLHKAKPKAETLRDPKAVNQAIRSGAAVQTVKKFDAGSNKKAAAAPVNARKLDEGTEPAALDRVAAEVRLTIQKARVEKKMSQA
        MPSR+PGAL+QDWEPVVLHKAKPKA+ LRDPKAVNQAIRSGA VQTVKKFDAG NKK  AAPVNARKL+EGTEPAALDRVA EVR  IQKAR+EKKMSQA
Subjt:  MPSRYPGALAQDWEPVVLHKAKPKAETLRDPKAVNQAIRSGAAVQTVKKFDAGSNKKAAAAPVNARKLDEGTEPAALDRVAAEVRLTIQKARVEKKMSQA

Query:  ELAKQINERTQVVQEYENGKAVPNQAVLAKMEKVLGVKLRGRSGK
        ELAKQINERTQVVQEYENGKAVPNQAVLAKMEKVLGVKLRGRSGK
Subjt:  ELAKQINERTQVVQEYENGKAVPNQAVLAKMEKVLGVKLRGRSGK

A0A1S3C8T1 multiprotein-bridging factor 1c2.7e-6392.41Show/hide
Query:  MPSRYPGALAQDWEPVVLHKAKPKAETLRDPKAVNQAIRSGAAVQTVKKFDAGSNKKAAAAPVNARKLDEGTEPAALDRVAAEVRLTIQKARVEKKMSQA
        MPSR+PGAL+QDWEPVVLHKAKPKA+ LRDPKAVNQAIRSGA VQTVKKFDAG NKK AAAPVNARKLDEGTEPAALDRV  EVR  IQKARVEKKMSQA
Subjt:  MPSRYPGALAQDWEPVVLHKAKPKAETLRDPKAVNQAIRSGAAVQTVKKFDAGSNKKAAAAPVNARKLDEGTEPAALDRVAAEVRLTIQKARVEKKMSQA

Query:  ELAKQINERTQVVQEYENGKAVPNQAVLAKMEKVLGVKLRGRSGK
        ELAKQINERTQVVQEYENGKAVPNQAVLAKMEKVLGVKLRGRSGK
Subjt:  ELAKQINERTQVVQEYENGKAVPNQAVLAKMEKVLGVKLRGRSGK

A0A5A7V2S1 Multiprotein-bridging factor 1c2.7e-6392.41Show/hide
Query:  MPSRYPGALAQDWEPVVLHKAKPKAETLRDPKAVNQAIRSGAAVQTVKKFDAGSNKKAAAAPVNARKLDEGTEPAALDRVAAEVRLTIQKARVEKKMSQA
        MPSR+PGAL+QDWEPVVLHKAKPKA+ LRDPKAVNQAIRSGA VQTVKKFDAG NKK AAAPVNARKLDEGTEPAALDRV  EVR  IQKARVEKKMSQA
Subjt:  MPSRYPGALAQDWEPVVLHKAKPKAETLRDPKAVNQAIRSGAAVQTVKKFDAGSNKKAAAAPVNARKLDEGTEPAALDRVAAEVRLTIQKARVEKKMSQA

Query:  ELAKQINERTQVVQEYENGKAVPNQAVLAKMEKVLGVKLRGRSGK
        ELAKQINERTQVVQEYENGKAVPNQAVLAKMEKVLGVKLRGRSGK
Subjt:  ELAKQINERTQVVQEYENGKAVPNQAVLAKMEKVLGVKLRGRSGK

A0A5D3CHG2 Multiprotein-bridging factor 1c2.7e-6392.41Show/hide
Query:  MPSRYPGALAQDWEPVVLHKAKPKAETLRDPKAVNQAIRSGAAVQTVKKFDAGSNKKAAAAPVNARKLDEGTEPAALDRVAAEVRLTIQKARVEKKMSQA
        MPSR+PGAL+QDWEPVVLHKAKPKA+ LRDPKAVNQAIRSGA VQTVKKFDAG NKK AAAPVNARKLDEGTEPAALDRV  EVR  IQKARVEKKMSQA
Subjt:  MPSRYPGALAQDWEPVVLHKAKPKAETLRDPKAVNQAIRSGAAVQTVKKFDAGSNKKAAAAPVNARKLDEGTEPAALDRVAAEVRLTIQKARVEKKMSQA

Query:  ELAKQINERTQVVQEYENGKAVPNQAVLAKMEKVLGVKLRGRSGK
        ELAKQINERTQVVQEYENGKAVPNQAVLAKMEKVLGVKLRGRSGK
Subjt:  ELAKQINERTQVVQEYENGKAVPNQAVLAKMEKVLGVKLRGRSGK

A0A6J1HN61 multiprotein-bridging factor 1c4.4e-6188.97Show/hide
Query:  MPSRYPGALAQDWEPVVLHKAKPKAETLRDPKAVNQAIRSGAAVQTVKKFDAGSNKKAAAAPVNARKLDEGTEPAALDRVAAEVRLTIQKARVEKKMSQA
        MPSR+PGA++QDWEPVVLHK+KPKA+ LRDPKAVNQAIRSGA V TVKKFDAGSNKKA AAPVNARKL+EGTEPAALDRV  EVR  IQKAR+EKKMSQA
Subjt:  MPSRYPGALAQDWEPVVLHKAKPKAETLRDPKAVNQAIRSGAAVQTVKKFDAGSNKKAAAAPVNARKLDEGTEPAALDRVAAEVRLTIQKARVEKKMSQA

Query:  ELAKQINERTQVVQEYENGKAVPNQAVLAKMEKVLGVKLRGRSGK
        ELAKQINERTQVVQEYENGKAVPNQAVLAKMEKVLGVKLRG+SGK
Subjt:  ELAKQINERTQVVQEYENGKAVPNQAVLAKMEKVLGVKLRGRSGK

SwissProt top hitse value%identityAlignment
Q6GPQ6 Endothelial differentiation-related factor 1 homolog6.8e-1945.45Show/hide
Query:  DWEPV-VLHKAKPKAETLRDPKAVNQAIRSGAAVQTVKKFDAGSNKKAAAAPVNARKLDEGTEPAALDRVAAEVRLTIQKARVEKKMSQAELAKQINERT
        DW+ V VL K  P A   +  +A+  A R G  V+T KK+ AG NK+      N  KLD  TE    DRV  EV   IQ+ R  K M+Q +LA +INE+ 
Subjt:  DWEPV-VLHKAKPKAETLRDPKAVNQAIRSGAAVQTVKKFDAGSNKKAAAAPVNARKLDEGTEPAALDRVAAEVRLTIQKARVEKKMSQAELAKQINERT

Query:  QVVQEYENGKAVPNQAVLAKMEKVLGVKLRGR
        QV+ +YE GKA+PN  V+ K+E+V+G+KLRG+
Subjt:  QVVQEYENGKAVPNQAVLAKMEKVLGVKLRGR

Q6PBY3 Endothelial differentiation-related factor 1 homolog1.2e-1842.75Show/hide
Query:  DWEPVVLHKAKPKAETLRDPKAVNQAIRSGAAVQTVKKFDAGSNKKAAAAPVNARKLDEGTEPAALDRVAAEVRLTIQKARVEKKMSQAELAKQINERTQ
        DW+ V + + K  A   +  +AV  A R G AV+T KK+ AG NK+      N  KLD  TE  +  RV  EV   IQ+ R  K ++Q +LA +INE+ Q
Subjt:  DWEPVVLHKAKPKAETLRDPKAVNQAIRSGAAVQTVKKFDAGSNKKAAAAPVNARKLDEGTEPAALDRVAAEVRLTIQKARVEKKMSQAELAKQINERTQ

Query:  VVQEYENGKAVPNQAVLAKMEKVLGVKLRGR
        ++ EYE GKA+PN  V+ K+E+ +G+KLRG+
Subjt:  VVQEYENGKAVPNQAVLAKMEKVLGVKLRGR

Q9LV58 Multiprotein-bridging factor 1c1.1e-5681.08Show/hide
Query:  MPSRYPGALAQDWEPVVLHKAKPKAETLRDPKAVNQAIRSGAAVQTVKKFDAGSNK--KAAAAPV-NARKLDEGTEPAALDRVAAEVRLTIQKARVEKKM
        MPSRYPGA+ QDWEPVVLHK+K K++ LRDPKAVN A+R+G AVQTVKKFDAGSNK  K+ A PV N +KL+E TEPAA+DRV AEVRL IQKAR+EKKM
Subjt:  MPSRYPGALAQDWEPVVLHKAKPKAETLRDPKAVNQAIRSGAAVQTVKKFDAGSNK--KAAAAPV-NARKLDEGTEPAALDRVAAEVRLTIQKARVEKKM

Query:  SQAELAKQINERTQVVQEYENGKAVPNQAVLAKMEKVLGVKLRGRSGK
        SQA+LAKQINERTQVVQEYENGKAVPNQAVLAKMEKVLGVKLRG+ GK
Subjt:  SQAELAKQINERTQVVQEYENGKAVPNQAVLAKMEKVLGVKLRGRSGK

Q9LXT3 Multiprotein-bridging factor 1b1.4e-3254.01Show/hide
Query:  GALAQDWEPVVLHKAKPKAETLRDPKAVNQAIRSGAAVQTVKKFDAGSNKKAAA-APVNARKLDEGTEPAALDRVAAEVRLTIQKARVEKKMSQAELAKQ
        G + QDWEPVV+ K  P A   RD K VN A RSGA ++TV+KF+AGSNK A++   +N +KLD+ TE  + DRV  E++  I +AR EKK++Q++LA  
Subjt:  GALAQDWEPVVLHKAKPKAETLRDPKAVNQAIRSGAAVQTVKKFDAGSNKKAAA-APVNARKLDEGTEPAALDRVAAEVRLTIQKARVEKKMSQAELAKQ

Query:  INERTQVVQEYENGKAVPNQAVLAKMEKVLGVKLRGR
        INE+ QV+QEYE+GKA+PNQ +L+K+E+ LG KLRG+
Subjt:  INERTQVVQEYENGKAVPNQAVLAKMEKVLGVKLRGR

Q9SJI8 Multiprotein-bridging factor 1a3.9e-3050.36Show/hide
Query:  GALAQDWEPVVLHKAKPKAETLRDPKAVNQAIRSGAAVQTVKKFDAGSNKKAAA-APVNARKLDEGTEPAALDRVAAEVRLTIQKARVEKKMSQAELAKQ
        G + QDWEPVV+ K    A   RD K VN A RSGA ++TV+KF+AG+NK A++   +N + LD+ TE    +RV  E++  I +AR +KK++Q++LA+ 
Subjt:  GALAQDWEPVVLHKAKPKAETLRDPKAVNQAIRSGAAVQTVKKFDAGSNKKAAA-APVNARKLDEGTEPAALDRVAAEVRLTIQKARVEKKMSQAELAKQ

Query:  INERTQVVQEYENGKAVPNQAVLAKMEKVLGVKLRGR
        INE+ QV+QEYE+GKA+PNQ +L+K+E+ LG KLRG+
Subjt:  INERTQVVQEYENGKAVPNQAVLAKMEKVLGVKLRGR

Arabidopsis top hitse value%identityAlignment
AT2G42680.1 multiprotein bridging factor 1A2.7e-3150.36Show/hide
Query:  GALAQDWEPVVLHKAKPKAETLRDPKAVNQAIRSGAAVQTVKKFDAGSNKKAAA-APVNARKLDEGTEPAALDRVAAEVRLTIQKARVEKKMSQAELAKQ
        G + QDWEPVV+ K    A   RD K VN A RSGA ++TV+KF+AG+NK A++   +N + LD+ TE    +RV  E++  I +AR +KK++Q++LA+ 
Subjt:  GALAQDWEPVVLHKAKPKAETLRDPKAVNQAIRSGAAVQTVKKFDAGSNKKAAA-APVNARKLDEGTEPAALDRVAAEVRLTIQKARVEKKMSQAELAKQ

Query:  INERTQVVQEYENGKAVPNQAVLAKMEKVLGVKLRGR
        INE+ QV+QEYE+GKA+PNQ +L+K+E+ LG KLRG+
Subjt:  INERTQVVQEYENGKAVPNQAVLAKMEKVLGVKLRGR

AT3G24500.1 multiprotein bridging factor 1C7.6e-5881.08Show/hide
Query:  MPSRYPGALAQDWEPVVLHKAKPKAETLRDPKAVNQAIRSGAAVQTVKKFDAGSNK--KAAAAPV-NARKLDEGTEPAALDRVAAEVRLTIQKARVEKKM
        MPSRYPGA+ QDWEPVVLHK+K K++ LRDPKAVN A+R+G AVQTVKKFDAGSNK  K+ A PV N +KL+E TEPAA+DRV AEVRL IQKAR+EKKM
Subjt:  MPSRYPGALAQDWEPVVLHKAKPKAETLRDPKAVNQAIRSGAAVQTVKKFDAGSNK--KAAAAPV-NARKLDEGTEPAALDRVAAEVRLTIQKARVEKKM

Query:  SQAELAKQINERTQVVQEYENGKAVPNQAVLAKMEKVLGVKLRGRSGK
        SQA+LAKQINERTQVVQEYENGKAVPNQAVLAKMEKVLGVKLRG+ GK
Subjt:  SQAELAKQINERTQVVQEYENGKAVPNQAVLAKMEKVLGVKLRGRSGK

AT3G24500.2 multiprotein bridging factor 1C2.6e-2970.53Show/hide
Query:  MPSRYPGALAQDWEPVVLHKAKPKAETLRDPKAVNQAIRSGAAVQTVKKFDAGSNK--KAAAAPV-NARKLDEGTEPAALDRVAAEVRLTIQKAR
        MPSRYPGA+ QDWEPVVLHK+K K++ LRDPKAVN A+R+G AVQTVKKFDAGSNK  K+ A PV N +KL+E TEPAA+DRV AEVRL +++ R
Subjt:  MPSRYPGALAQDWEPVVLHKAKPKAETLRDPKAVNQAIRSGAAVQTVKKFDAGSNK--KAAAAPV-NARKLDEGTEPAALDRVAAEVRLTIQKAR

AT3G58680.1 multiprotein bridging factor 1B1.0e-3354.01Show/hide
Query:  GALAQDWEPVVLHKAKPKAETLRDPKAVNQAIRSGAAVQTVKKFDAGSNKKAAA-APVNARKLDEGTEPAALDRVAAEVRLTIQKARVEKKMSQAELAKQ
        G + QDWEPVV+ K  P A   RD K VN A RSGA ++TV+KF+AGSNK A++   +N +KLD+ TE  + DRV  E++  I +AR EKK++Q++LA  
Subjt:  GALAQDWEPVVLHKAKPKAETLRDPKAVNQAIRSGAAVQTVKKFDAGSNKKAAA-APVNARKLDEGTEPAALDRVAAEVRLTIQKARVEKKMSQAELAKQ

Query:  INERTQVVQEYENGKAVPNQAVLAKMEKVLGVKLRGR
        INE+ QV+QEYE+GKA+PNQ +L+K+E+ LG KLRG+
Subjt:  INERTQVVQEYENGKAVPNQAVLAKMEKVLGVKLRGR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCGAGCCGATACCCCGGAGCCCTAGCTCAAGATTGGGAGCCAGTGGTTCTCCACAAGGCGAAGCCAAAGGCTGAGACCCTTCGCGATCCAAAGGCAGTGAACCAAGC
GATCCGGTCCGGCGCAGCGGTGCAGACAGTGAAGAAATTCGACGCCGGTTCGAACAAGAAAGCCGCAGCGGCGCCAGTGAACGCGAGGAAGCTGGACGAAGGGACTGAGC
CGGCGGCGCTGGACCGCGTGGCGGCGGAGGTGAGACTGACGATTCAGAAGGCTCGAGTGGAGAAGAAGATGAGCCAGGCGGAATTGGCGAAACAGATAAACGAGCGGACT
CAGGTTGTGCAAGAATACGAAAATGGGAAGGCGGTGCCGAATCAGGCGGTTTTGGCGAAGATGGAGAAGGTTTTGGGCGTGAAGCTTCGAGGCAGATCGGGGAAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGCCGAGCCGATACCCCGGAGCCCTAGCTCAAGATTGGGAGCCAGTGGTTCTCCACAAGGCGAAGCCAAAGGCTGAGACCCTTCGCGATCCAAAGGCAGTGAACCAAGC
GATCCGGTCCGGCGCAGCGGTGCAGACAGTGAAGAAATTCGACGCCGGTTCGAACAAGAAAGCCGCAGCGGCGCCAGTGAACGCGAGGAAGCTGGACGAAGGGACTGAGC
CGGCGGCGCTGGACCGCGTGGCGGCGGAGGTGAGACTGACGATTCAGAAGGCTCGAGTGGAGAAGAAGATGAGCCAGGCGGAATTGGCGAAACAGATAAACGAGCGGACT
CAGGTTGTGCAAGAATACGAAAATGGGAAGGCGGTGCCGAATCAGGCGGTTTTGGCGAAGATGGAGAAGGTTTTGGGCGTGAAGCTTCGAGGCAGATCGGGGAAGTGA
Protein sequenceShow/hide protein sequence
MPSRYPGALAQDWEPVVLHKAKPKAETLRDPKAVNQAIRSGAAVQTVKKFDAGSNKKAAAAPVNARKLDEGTEPAALDRVAAEVRLTIQKARVEKKMSQAELAKQINERT
QVVQEYENGKAVPNQAVLAKMEKVLGVKLRGRSGK