; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CcUC11G212030 (gene) of Watermelon (PI 537277) v1 genome

Gene IDCcUC11G212030
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionUnknown protein
Genome locationCicolChr11:3987874..3990305
RNA-Seq ExpressionCcUC11G212030
SyntenyCcUC11G212030
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6571061.1 hypothetical protein SDJN03_29976, partial [Cucurbita argyrosperma subsp. sororia]3.8e-1176.79Show/hide
Query:  NYNQALFSSF--HEMCILEVTSMKASSLQGMVNPPVGWLNPNSSSALLSKSKNEGW
        N + AL S F       LEVTSMKASSLQ MVNPPVGWLNPNSSSALLSKSKNEGW
Subjt:  NYNQALFSSF--HEMCILEVTSMKASSLQGMVNPPVGWLNPNSSSALLSKSKNEGW
KAG6605012.1 hypothetical protein SDJN03_02329, partial [Cucurbita argyrosperma subsp. sororia]4.9e-1157.75Show/hide
Query:  LEVTSMKASSLQGMVNPPVGWLNPNSSSALLSKSKNEGWFKNTGLTSPRNGLCFENLLGTKENRWYTKSHV
        LEV   KASSL G+V PP+GW NPNSSS LLSKS  EG F           L F+NLLG K+NRW T+SH+
Subjt:  LEVTSMKASSLQGMVNPPVGWLNPNSSSALLSKSKNEGWFKNTGLTSPRNGLCFENLLGTKENRWYTKSHV
TrEMBL top hitse value%identityAlignment
A0A6J1JHD6 uncharacterized protein LOC111484388 isoform X26.3e-0460.47Show/hide
Query:  EMCILEVTSMKASSLQGMVNPPVGWLNPNSSSALLSKSKNEGW
        E  I ++       +  MVNPPVGWL PNSSSALLS SKNEGW
Subjt:  EMCILEVTSMKASSLQGMVNPPVGWLNPNSSSALLSKSKNEGW
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATATGGAAAGTGAGAAAGGAGAGAAGACAAGAACAAACAACTCGAAGATACGTGTCGTTGACAAGCTGCTTCATCAAATATTCACATGGGTTAATCAAGTGATTGA
AGTACAATCATTTTCAAATTTGATCCAAATTTTGAAAAAGAATAAAAAAAGTTGTCAAAACTACAACCAGGCTTTGTTCTCAAGCTTCCATGAAATGTGCATTCTAGAAG
TGACATCAATGAAGGCTTCTTCTTTGCAGGGAATGGTCAACCCTCCTGTTGGATGGTTGAATCCAAACTCTTCTTCAGCCCTCCTTAGCAAGTCTAAAAATGAAGGATGG
TTCAAGAACACTGGATTGACATCTCCCAGAAATGGACTGTGTTTTGAAAATTTGCTTGGCACTAAAGAGAATAGATGGTATACGAAATCCCATGTCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGATATGGAAAGTGAGAAAGGAGAGAAGACAAGAACAAACAACTCGAAGATACGTGTCGTTGACAAGCTGCTTCATCAAATATTCACATGGGTTAATCAAGTGATTGA
AGTACAATCATTTTCAAATTTGATCCAAATTTTGAAAAAGAATAAAAAAAGTTGTCAAAACTACAACCAGGCTTTGTTCTCAAGCTTCCATGAAATGTGCATTCTAGAAG
TGACATCAATGAAGGCTTCTTCTTTGCAGGGAATGGTCAACCCTCCTGTTGGATGGTTGAATCCAAACTCTTCTTCAGCCCTCCTTAGCAAGTCTAAAAATGAAGGATGG
TTCAAGAACACTGGATTGACATCTCCCAGAAATGGACTGTGTTTTGAAAATTTGCTTGGCACTAAAGAGAATAGATGGTATACGAAATCCCATGTCTAA
Protein sequenceShow/hide protein sequence
MDMESEKGEKTRTNNSKIRVVDKLLHQIFTWVNQVIEVQSFSNLIQILKKNKKSCQNYNQALFSSFHEMCILEVTSMKASSLQGMVNPPVGWLNPNSSSALLSKSKNEGW
FKNTGLTSPRNGLCFENLLGTKENRWYTKSHV