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CcUC11G212100 (gene) of Watermelon (PI 537277) v1 genome

Gene IDCcUC11G212100
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionSAUR-like auxin-responsive protein family
Genome locationCicolChr11:4006372..4011487
RNA-Seq ExpressionCcUC11G212100
SyntenyCcUC11G212100
Gene Ontology termsGO:0009733 - response to auxin (biological process)
InterPro domainsIPR003676 - Small auxin-up RNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA3487758.1 auxin-responsive protein SAUR23-like [Gossypium australe]4.8e-5357.87Show/hide
Query:  MGIRLPSSLIHHAKQILKM--KNQSNVPRGHIAVYVGEIDIQRKRFVVPISFLNHPSFKQLLSHAEEEFG---------FHH----------------PQ
        MG RLP S+I HAKQ+LK+  +NQ++VP+GHIAVYVGE  IQ+ RFVVPIS+LNHPSF  LL+ AEE+FG         F H                  
Subjt:  MGIRLPSSLIHHAKQILKM--KNQSNVPRGHIAVYVGEIDIQRKRFVVPISFLNHPSFKQLLSHAEEEFG---------FHH----------------PQ

Query:  GEMGIRLPSILLNAKQIFRMQSISTRCHSNIPKGHIAVYVGETRRKRFVVPVSYLNHPSFLSLLNRAEEEFGFNHPSGGLTIPCKEDAFIDLTSRLH
          MG RLPSI++NAKQ+ + Q    +  S++PKGHI +YVGE  RKR+++PV++LNHPSF+ LLN+AEEEFGFNHP GGLTIPCKED FIDL SRLH
Subjt:  GEMGIRLPSILLNAKQIFRMQSISTRCHSNIPKGHIAVYVGETRRKRFVVPVSYLNHPSFLSLLNRAEEEFGFNHPSGGLTIPCKEDAFIDLTSRLH

KAF8377845.1 hypothetical protein HHK36_031231 [Tetracentron sinense]6.3e-5356.59Show/hide
Query:  MGIRLPSSLIHHAKQILKMK------------NQSNVPRGHIAVYVGEIDIQRKRFVVPISFLNHPSFKQLLSHAEEEFGFHHPQGE-------------
        MGIRLP SL  HAKQILK++            N ++VP+GH AVYVGE   Q++R+VVP+S+LNHP F+ LL+ AEEEFGF H  G              
Subjt:  MGIRLPSSLIHHAKQILKMK------------NQSNVPRGHIAVYVGEIDIQRKRFVVPISFLNHPSFKQLLSHAEEEFGFHHPQGE-------------

Query:  ---MGIRLPSILLNAKQIFRMQSISTR-------CHSNIPKGHIAVYVGETRRKRFVVPVSYLNHPSFLSLLNRAEEEFGFNHPSGGLTIPCKEDAFIDL
           MGIRLPS+ L+AKQI ++QS+ TR         +++PKGH AVYVGE ++KRFVVP+S+LNHPSF  LL+RAEEEFG++HP GGLTIPCKE AFIDL
Subjt:  ---MGIRLPSILLNAKQIFRMQSISTR-------CHSNIPKGHIAVYVGETRRKRFVVPVSYLNHPSFLSLLNRAEEEFGFNHPSGGLTIPCKEDAFIDL

Query:  TSRLH
        TSRL+
Subjt:  TSRLH

KAG5581872.1 hypothetical protein H5410_052499, partial [Solanum commersonii]1.1e-5262.28Show/hide
Query:  MGIRLPSSLIHHAKQILKM-----KNQSNVPRGHIAVYVGEIDIQRKRFVVPISFLNHPSFKQLLSHAEEEFGFHHPQGEMGIRLPSILLNAKQIFRMQS
        MG RL   +I  AK I K+     +N S+VP+GH AVY+GE  I++KRFVVPI++LNHPSF++LL  AEEEFGFHH  G MG RL  ++ +AKQI +MQS
Subjt:  MGIRLPSSLIHHAKQILKM-----KNQSNVPRGHIAVYVGEIDIQRKRFVVPISFLNHPSFKQLLSHAEEEFGFHHPQGEMGIRLPSILLNAKQIFRMQS

Query:  ISTRCHSNIPKGHIAVYVGETRRKRFVVPVSYLNHPSFLSLLNRAEEEFGFNHPSGGLTIPCKEDAF
        + TR HS++PKGH AVYVGET +KR+VVP++YLNHPSF  LL ++EEEFGF+HP GGLTIPC ED F
Subjt:  ISTRCHSNIPKGHIAVYVGETRRKRFVVPVSYLNHPSFLSLLNRAEEEFGFNHPSGGLTIPCKEDAF

TXG64716.1 hypothetical protein EZV62_011710 [Acer yangbiense]8.8e-5565.36Show/hide
Query:  IRLPSSLIHHAKQILK----MKNQSN-----VPRGHIAVYVGEIDIQRKRFVVPISFLNHPSFKQLLSHAEEEFGFHHPQGE--MGIRLPSILLNAKQIF
        IRLP S+I +AKQ LK     +NQ +     VP+GH AVYVGE  IQRKRFVVPISFLN+P F  LL+  EEEFGF+HP G   MGIR PS++++AKQI 
Subjt:  IRLPSSLIHHAKQILK----MKNQSN-----VPRGHIAVYVGEIDIQRKRFVVPISFLNHPSFKQLLSHAEEEFGFHHPQGE--MGIRLPSILLNAKQIF

Query:  RMQSISTRCHSNIPKGHIAVYVGETRRKRFVVPVSYLNHPSFLSLLNRAEEEFGFNHPSGGLTIPCKEDAFIDLTSRLH
        +  +   + HS++PKGHIAVYVGE ++KRFVVP+SYLNHPSF  LLNRAEEEFGFNHP GGLTIPCKEDAFI++TS+L+
Subjt:  RMQSISTRCHSNIPKGHIAVYVGETRRKRFVVPVSYLNHPSFLSLLNRAEEEFGFNHPSGGLTIPCKEDAFIDLTSRLH

XP_006423559.2 uncharacterized protein LOC18033793 [Citrus clementina]2.0e-5456.19Show/hide
Query:  MGIRLPSSLIHHAKQILKM----KNQSNVPRGHIAVYVGEIDIQRKRFVVPISFLNHPSFKQLLSHAEEEFGFHHPQGE---------------------
        MGIRLPS ++ +AKQ+LK+    KNQ  VP+GH+AVYVGE  +++KRFVVP+++++HP F  LL  AEEEFGFHHP G                      
Subjt:  MGIRLPSSLIHHAKQILKM----KNQSNVPRGHIAVYVGEIDIQRKRFVVPISFLNHPSFKQLLSHAEEEFGFHHPQGE---------------------

Query:  ---MGIRLPSILLNAKQIFRMQSISTRCHSNIPKGHIAVYVGETRRKRFVVPVSYLNHPSFLSLLNRAEEEFGFNHPSGGLTIPCKEDAFIDLT
           MGIRLP+++ NAKQI ++ S   +  S +PKGH+ VYVGE ++ RFVVP+SYLNHPSF+ LLNRAEEEFGFNHP GGLTIPC+EDAFI++T
Subjt:  ---MGIRLPSILLNAKQIFRMQSISTRCHSNIPKGHIAVYVGETRRKRFVVPVSYLNHPSFLSLLNRAEEEFGFNHPSGGLTIPCKEDAFIDLT

TrEMBL top hitse value%identityAlignment
A0A5B6WMK6 Auxin-responsive protein SAUR23-like1.5e-5254.38Show/hide
Query:  MGIRLPSSLIHHAKQILKM--KNQSNVPRGHIAVYVGEIDIQRKRFVVPISFLNHPSFKQLLSHAEEEFGFHHPQG------------------------
        MGI LP S+I HAKQ+LK   +NQ +VP+GHIAVYVGE  ++  RFVVPIS+LNHP F  LL  AEEEFGF+HP G                        
Subjt:  MGIRLPSSLIHHAKQILKM--KNQSNVPRGHIAVYVGEIDIQRKRFVVPISFLNHPSFKQLLSHAEEEFGFHHPQG------------------------

Query:  ---------------------EMGIRLPSILLNAKQIFRMQSISTRCHSNIPKGHIAVYVGETRRKRFVVPVSYLNHPSFLSLLNRAEEEFGFNHPSGGL
                              MGI LPS++ +AKQ+ + QS   R   ++PKGHIAVYVGE ++ RFVVP+SYLNHP FL LL RAEEEFGFNHP GGL
Subjt:  ---------------------EMGIRLPSILLNAKQIFRMQSISTRCHSNIPKGHIAVYVGETRRKRFVVPVSYLNHPSFLSLLNRAEEEFGFNHPSGGL

Query:  TIPCKEDAFIDLTSRLH
        TIPC EDAFIDLTSRLH
Subjt:  TIPCKEDAFIDLTSRLH

A0A5B6X1S1 Auxin-responsive protein SAUR23-like2.3e-5357.87Show/hide
Query:  MGIRLPSSLIHHAKQILKM--KNQSNVPRGHIAVYVGEIDIQRKRFVVPISFLNHPSFKQLLSHAEEEFG---------FHH----------------PQ
        MG RLP S+I HAKQ+LK+  +NQ++VP+GHIAVYVGE  IQ+ RFVVPIS+LNHPSF  LL+ AEE+FG         F H                  
Subjt:  MGIRLPSSLIHHAKQILKM--KNQSNVPRGHIAVYVGEIDIQRKRFVVPISFLNHPSFKQLLSHAEEEFG---------FHH----------------PQ

Query:  GEMGIRLPSILLNAKQIFRMQSISTRCHSNIPKGHIAVYVGETRRKRFVVPVSYLNHPSFLSLLNRAEEEFGFNHPSGGLTIPCKEDAFIDLTSRLH
          MG RLPSI++NAKQ+ + Q    +  S++PKGHI +YVGE  RKR+++PV++LNHPSF+ LLN+AEEEFGFNHP GGLTIPCKED FIDL SRLH
Subjt:  GEMGIRLPSILLNAKQIFRMQSISTRCHSNIPKGHIAVYVGETRRKRFVVPVSYLNHPSFLSLLNRAEEEFGFNHPSGGLTIPCKEDAFIDLTSRLH

A0A5C7I8F1 Uncharacterized protein4.3e-5565.36Show/hide
Query:  IRLPSSLIHHAKQILK----MKNQSN-----VPRGHIAVYVGEIDIQRKRFVVPISFLNHPSFKQLLSHAEEEFGFHHPQGE--MGIRLPSILLNAKQIF
        IRLP S+I +AKQ LK     +NQ +     VP+GH AVYVGE  IQRKRFVVPISFLN+P F  LL+  EEEFGF+HP G   MGIR PS++++AKQI 
Subjt:  IRLPSSLIHHAKQILK----MKNQSN-----VPRGHIAVYVGEIDIQRKRFVVPISFLNHPSFKQLLSHAEEEFGFHHPQGE--MGIRLPSILLNAKQIF

Query:  RMQSISTRCHSNIPKGHIAVYVGETRRKRFVVPVSYLNHPSFLSLLNRAEEEFGFNHPSGGLTIPCKEDAFIDLTSRLH
        +  +   + HS++PKGHIAVYVGE ++KRFVVP+SYLNHPSF  LLNRAEEEFGFNHP GGLTIPCKEDAFI++TS+L+
Subjt:  RMQSISTRCHSNIPKGHIAVYVGETRRKRFVVPVSYLNHPSFLSLLNRAEEEFGFNHPSGGLTIPCKEDAFIDLTSRLH

A0A7J7LNK3 Uncharacterized protein9.2e-5052.86Show/hide
Query:  MGIRLPSSLIHHAKQILKM-----KNQSNVPRGHIAVYVGEIDIQRKRFVVPISFLNHPSFKQLLSHAEEEFGFHHPQG---------------------
        MGIRLP  ++ HAKQI++      K Q +VP+GH  VYVGE +  +KRFV+PI +LNHP F+ LL+ AEEEFGF HP G                     
Subjt:  MGIRLPSSLIHHAKQILKM-----KNQSNVPRGHIAVYVGEIDIQRKRFVVPISFLNHPSFKQLLSHAEEEFGFHHPQG---------------------

Query:  ----EMGIRLPSILLNAKQIFRMQSISTR--------CHSNIPKGHIAVYVGETRRKRFVVPVSYLNHPSFLSLLNRAEEEFGFNHPSGGLTIPCKEDAF
             MGIRL S+  +AKQI + QS+ T+          +++PKGH+AVYVGE  +KRFVVP+SYLNHPSF  LL+RAEEEFGF+H  GGLTIPCKE AF
Subjt:  ----EMGIRLPSILLNAKQIFRMQSISTR--------CHSNIPKGHIAVYVGETRRKRFVVPVSYLNHPSFLSLLNRAEEEFGFNHPSGGLTIPCKEDAF

Query:  IDLTSRLHTS
        ID TSRL+ S
Subjt:  IDLTSRLHTS

A0A7J7MSE6 Uncharacterized protein2.4e-5059.09Show/hide
Query:  MGIRLPSSLIHHAKQILKMK-----NQSNVPRGHIAVYVGEIDIQRKRFVVPISFLNHPSFKQLLSHAEEEFGFHHPQGEMGIRLPSILLNAKQIFRMQS
        MGIRLP  L+ H KQI++         +NVP+GH AVY+GE  IQ+KRFVVPI +LNHP F+ LLS AEEEFGF+HP G MGIR+PS + + KQI +   
Subjt:  MGIRLPSSLIHHAKQILKMK-----NQSNVPRGHIAVYVGEIDIQRKRFVVPISFLNHPSFKQLLSHAEEEFGFHHPQGEMGIRLPSILLNAKQIFRMQS

Query:  ISTRCHSNIPKGHIAVYVGETRRKRFVVPVSYLNHPSFLSLLNRAEEEFGFNHPSGGLTIPCKEDAFIDLTSRLHT
         ++   +N+PKGH AVYVG +++KRFVVP+SYLNH SF  LL++AEEEFGF HP GGLT+PC ED FI+LT  L++
Subjt:  ISTRCHSNIPKGHIAVYVGETRRKRFVVPVSYLNHPSFLSLLNRAEEEFGFNHPSGGLTIPCKEDAFIDLTSRLHT

SwissProt top hitse value%identityAlignment
Q9FJF6 Auxin-responsive protein SAUR234.9e-2462.07Show/hide
Query:  LLNAKQIFRMQSISTRCHSNIPKGHIAVYVGETRRKRFVVPVSYLNHPSFLSLLNRAEEEFGFNHPSGGLTIPCKEDAFIDLTSRLH
        LL AK+I    S S    S  PKG +AVYVGE+++KR++VP+SYLN PSF +LL+++EEEFGF+HP GGLTIPC ED FI++TSRLH
Subjt:  LLNAKQIFRMQSISTRCHSNIPKGHIAVYVGETRRKRFVVPVSYLNHPSFLSLLNRAEEEFGFNHPSGGLTIPCKEDAFIDLTSRLH

Q9FJF7 Auxin-responsive protein SAUR226.4e-2461.63Show/hide
Query:  LLNAKQIFRMQSISTRCHSNIPKGHIAVYVGETRRKRFVVPVSYLNHPSFLSLLNRAEEEFGFNHPSGGLTIPCKEDAFIDLTSRL
        LL AK+I    S ST   S  PKG +AVYVGE+++KR++VP+SYLN PSF +LL+++E+EFGF+HP GGLTIPC ED FI++TSRL
Subjt:  LLNAKQIFRMQSISTRCHSNIPKGHIAVYVGETRRKRFVVPVSYLNHPSFLSLLNRAEEEFGFNHPSGGLTIPCKEDAFIDLTSRL

Q9FJG0 Auxin-responsive protein SAUR204.9e-2462.35Show/hide
Query:  LLNAKQIFRMQSISTRCHSNIPKGHIAVYVGETRRKRFVVPVSYLNHPSFLSLLNRAEEEFGFNHPSGGLTIPCKEDAFIDLTSR
        LL AK+I    S ST   S  PKG +AVYVGE+++KR++VP+SYLN PSF +LL+++EEEFGF+HP GGLTIPC ED FI++TSR
Subjt:  LLNAKQIFRMQSISTRCHSNIPKGHIAVYVGETRRKRFVVPVSYLNHPSFLSLLNRAEEEFGFNHPSGGLTIPCKEDAFIDLTSR

Q9FJG1 Auxin-responsive protein SAUR191.9e-2361.63Show/hide
Query:  LLNAKQIFRMQSISTRCHSNIPKGHIAVYVGETRRKRFVVPVSYLNHPSFLSLLNRAEEEFGFNHPSGGLTIPCKEDAFIDLTSRL
        LL AK+I    S ST   S  PKG +AVYVGE+++KR++VP+SYL+ PSF +LL+++EEEFGF HP GGLTIPC ED FI++TSRL
Subjt:  LLNAKQIFRMQSISTRCHSNIPKGHIAVYVGETRRKRFVVPVSYLNHPSFLSLLNRAEEEFGFNHPSGGLTIPCKEDAFIDLTSRL

Q9FK62 Auxin-responsive protein SAUR241.3e-2463.95Show/hide
Query:  LLNAKQIFRMQSISTRCHSNIPKGHIAVYVGETRRKRFVVPVSYLNHPSFLSLLNRAEEEFGFNHPSGGLTIPCKEDAFIDLTSRL
        LL AK+I    S ST   S  PKG +AVYVGE+++KR++VPVSYLN PSF +LL+++EEEFGF+HP GGLTIPC ED FI++TSRL
Subjt:  LLNAKQIFRMQSISTRCHSNIPKGHIAVYVGETRRKRFVVPVSYLNHPSFLSLLNRAEEEFGFNHPSGGLTIPCKEDAFIDLTSRL

Arabidopsis top hitse value%identityAlignment
AT2G21210.1 SAUR-like auxin-responsive protein family4.9e-2759.18Show/hide
Query:  MGIRLPSILLNAKQIFRMQSISTRCHSNIPKGHIAVYVGE-TRRKRFVVPVSYLNHPSFLSLLNRAEEEFGFNHPSGGLTIPCKEDAFIDLTSRLHTS
        M IR+  +L ++KQ+ +  S S+  +  IPKGH+AVYVGE  +++RFVVPV+YL+HP F  LL +AEEEFGF+HP GGLTIPC E  FIDL SRL TS
Subjt:  MGIRLPSILLNAKQIFRMQSISTRCHSNIPKGHIAVYVGE-TRRKRFVVPVSYLNHPSFLSLLNRAEEEFGFNHPSGGLTIPCKEDAFIDLTSRLHTS

AT4G34800.1 SAUR-like auxin-responsive protein family1.6e-2561.96Show/hide
Query:  MGIRLPSILLNAKQIFRMQSISTRCHSNIPKGHIAVYVGE--TRRKRFVVPVSYLNHPSFLSLLNRAEEEFGFNHPSGGLTIPCKEDAFIDL
        M IRL S ++N+KQ       S +  S +PKGH+AVYVGE    +KRFVVP+SYLNHPSF  LL+RAEEEFGFNHP GGLTIPC+E+ F+ L
Subjt:  MGIRLPSILLNAKQIFRMQSISTRCHSNIPKGHIAVYVGE--TRRKRFVVPVSYLNHPSFLSLLNRAEEEFGFNHPSGGLTIPCKEDAFIDL

AT4G34810.1 SAUR-like auxin-responsive protein family7.0e-2654.81Show/hide
Query:  MGIRLPSILLNAKQIFRMQSISTR------CHSNIPKGHIAVYVG---ETRRKRFVVPVSYLNHPSFLSLLNRAEEEFGFNHPSGGLTIPCKEDAFIDL-
        MG+   +I    KQI ++ S++ R         ++PKGH+AVYVG   E  +KRFVVP+S+LNHPSF   L+RAEEEFGFNHP GGLTIPC+E+ F+DL 
Subjt:  MGIRLPSILLNAKQIFRMQSISTR------CHSNIPKGHIAVYVG---ETRRKRFVVPVSYLNHPSFLSLLNRAEEEFGFNHPSGGLTIPCKEDAFIDL-

Query:  TSRL
         SRL
Subjt:  TSRL

AT4G38840.1 SAUR-like auxin-responsive protein family2.6e-2858.59Show/hide
Query:  MGIRLPSILLNAKQIFR----MQSISTRCHSNIPKGHIAVYVGETRRKRFVVPVSYLNHPSFLSLLNRAEEEFGFNHPSGGLTIPCKEDAFIDLTSRLH
        M IR+P +L ++KQI R    + S S+    ++PKG++AVYVGE   KRFVVPVSYL+ PSF  LL +AEEEFGF+HP GGLTIPC E+ FIDL SR +
Subjt:  MGIRLPSILLNAKQIFR----MQSISTRCHSNIPKGHIAVYVGETRRKRFVVPVSYLNHPSFLSLLNRAEEEFGFNHPSGGLTIPCKEDAFIDLTSRLH

AT5G18080.1 SAUR-like auxin-responsive protein family9.2e-2663.95Show/hide
Query:  LLNAKQIFRMQSISTRCHSNIPKGHIAVYVGETRRKRFVVPVSYLNHPSFLSLLNRAEEEFGFNHPSGGLTIPCKEDAFIDLTSRL
        LL AK+I    S ST   S  PKG +AVYVGE+++KR++VPVSYLN PSF +LL+++EEEFGF+HP GGLTIPC ED FI++TSRL
Subjt:  LLNAKQIFRMQSISTRCHSNIPKGHIAVYVGETRRKRFVVPVSYLNHPSFLSLLNRAEEEFGFNHPSGGLTIPCKEDAFIDLTSRL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAATTCGTTTGCCATCGTCTTTGATTCATCATGCCAAGCAAATTCTAAAGATGAAAAACCAGTCAAATGTACCAAGAGGTCATATTGCTGTTTATGTGGGC
GAGATCGACATTCAAAGGAAACGTTTTGTGGTTCCGATATCTTTCCTAAACCATCCTTCATTTAAACAACTCCTAAGCCATGCTGAGGAAGAGTTTGGATTCCAT
CATCCCCAAGGAGAAATGGGAATTCGTCTGCCTTCGATTCTCCTCAATGCCAAGCAAATATTCAGAATGCAATCTATTTCAACAAGATGTCATTCCAACATTCCC
AAAGGCCACATTGCAGTATACGTGGGAGAGACTCGAAGGAAGCGATTTGTGGTGCCGGTATCATACTTGAACCATCCTTCATTTCTAAGTCTGCTCAACAGAGCT
GAAGAAGAGTTTGGATTCAACCATCCAAGTGGGGGTTTGACAATTCCCTGCAAAGAAGATGCCTTCATTGATCTCACTTCAAGATTGCATACCTCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGAATTCGTTTGCCATCGTCTTTGATTCATCATGCCAAGCAAATTCTAAAGATGAAAAACCAGTCAAATGTACCAAGAGGTCATATTGCTGTTTATGTGGGC
GAGATCGACATTCAAAGGAAACGTTTTGTGGTTCCGATATCTTTCCTAAACCATCCTTCATTTAAACAACTCCTAAGCCATGCTGAGGAAGAGTTTGGATTCCAT
CATCCCCAAGGAGAAATGGGAATTCGTCTGCCTTCGATTCTCCTCAATGCCAAGCAAATATTCAGAATGCAATCTATTTCAACAAGATGTCATTCCAACATTCCC
AAAGGCCACATTGCAGTATACGTGGGAGAGACTCGAAGGAAGCGATTTGTGGTGCCGGTATCATACTTGAACCATCCTTCATTTCTAAGTCTGCTCAACAGAGCT
GAAGAAGAGTTTGGATTCAACCATCCAAGTGGGGGTTTGACAATTCCCTGCAAAGAAGATGCCTTCATTGATCTCACTTCAAGATTGCATACCTCTTGA
Protein sequenceShow/hide protein sequence
MGIRLPSSLIHHAKQILKMKNQSNVPRGHIAVYVGEIDIQRKRFVVPISFLNHPSFKQLLSHAEEEFGFHHPQGEMGIRLPSILLNAKQIFRMQSISTRCHSNIP
KGHIAVYVGETRRKRFVVPVSYLNHPSFLSLLNRAEEEFGFNHPSGGLTIPCKEDAFIDLTSRLHTS