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CcUC11G212260 (gene) of Watermelon (PI 537277) v1 genome

Gene IDCcUC11G212260
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionComplex I-B22
Genome locationCicolChr11:4178519..4183499
RNA-Seq ExpressionCcUC11G212260
SyntenyCcUC11G212260
Gene Ontology termsGO:0006120 - mitochondrial electron transport, NADH to ubiquinone (biological process)
GO:0005747 - mitochondrial respiratory chain complex I (cellular component)
InterPro domainsIPR008011 - Complex 1 LYR protein
IPR033034 - NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7035055.1 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9 [Cucurbita argyrosperma subsp. argyrosperma]3.6e-5390.43Show/hide
Query:  MSFSSTAGYLARRAAQKERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFEANKHVEDLDTIDKLIADGEASYNKWRHPDPYIVPWAPGGSKFTRNPT
        MS SSTAGYLARRAAQ+ERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFEANK+VEDLDTIDKLIADGEASYNKWRHPDPYIVPWAPGGSKFTRNPT
Subjt:  MSFSSTAGYLARRAAQKERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFEANKHVEDLDTIDKLIADGEASYNKWRHPDPYIVPWAPGGSKFTRNPT

Query:  PPEGVEMVGGFVRVD
        PP GVE++  + R D
Subjt:  PPEGVEMVGGFVRVD

XP_022146081.1 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9 [Momordica charantia]2.1e-5390.43Show/hide
Query:  MSFSSTAGYLARRAAQKERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFEANKHVEDLDTIDKLIADGEASYNKWRHPDPYIVPWAPGGSKFTRNPT
        MSFSSTAGYLARRAAQKERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFEANKHVEDLDTIDKLIA GEAS+NKWRHPDPYIVPWAPGGSKFTRNPT
Subjt:  MSFSSTAGYLARRAAQKERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFEANKHVEDLDTIDKLIADGEASYNKWRHPDPYIVPWAPGGSKFTRNPT

Query:  PPEGVEMVGGFVRVD
        PP G+E++  + R D
Subjt:  PPEGVEMVGGFVRVD

XP_022944756.1 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9-like isoform X1 [Cucurbita moschata]2.7e-5388.7Show/hide
Query:  MSFSSTAGYLARRAAQKERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFEANKHVEDLDTIDKLIADGEASYNKWRHPDPYIVPWAPGGSKFTRNPT
        MSFSSTAGYLARRAAQKERVRILYRRALKDTLNWAVHRHLFYRDASDLRERF+ANKHVEDLD ID++IADGEASYNKWRHPDPYIVPWAPGGSKFTRNPT
Subjt:  MSFSSTAGYLARRAAQKERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFEANKHVEDLDTIDKLIADGEASYNKWRHPDPYIVPWAPGGSKFTRNPT

Query:  PPEGVEMVGGFVRVD
        PP G+E++  + R D
Subjt:  PPEGVEMVGGFVRVD

XP_023532128.1 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9-like [Cucurbita pepo subsp. pepo]6.1e-5389.57Show/hide
Query:  MSFSSTAGYLARRAAQKERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFEANKHVEDLDTIDKLIADGEASYNKWRHPDPYIVPWAPGGSKFTRNPT
        MS SSTAGYLARRAAQKERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFEANK+VED+DTIDKLIADGEASYNKWRHPDPYIVPWAPGGSKFTRNPT
Subjt:  MSFSSTAGYLARRAAQKERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFEANKHVEDLDTIDKLIADGEASYNKWRHPDPYIVPWAPGGSKFTRNPT

Query:  PPEGVEMVGGFVRVD
        PP G+E++  + R D
Subjt:  PPEGVEMVGGFVRVD

XP_038902763.1 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9 [Benincasa hispida]2.2e-5592.17Show/hide
Query:  MSFSSTAGYLARRAAQKERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFEANKHVEDLDTIDKLIADGEASYNKWRHPDPYIVPWAPGGSKFTRNPT
        MSFSSTAGYLARRAAQKERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFEA+KHVEDLDTID+LIADGEASYNKWRHPDPYIVPWAPGGSKFTRNPT
Subjt:  MSFSSTAGYLARRAAQKERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFEANKHVEDLDTIDKLIADGEASYNKWRHPDPYIVPWAPGGSKFTRNPT

Query:  PPEGVEMVGGFVRVD
        PPEG+E++ G+ R D
Subjt:  PPEGVEMVGGFVRVD

TrEMBL top hitse value%identityAlignment
A0A6J1CYA5 Complex I-B221.0e-5390.43Show/hide
Query:  MSFSSTAGYLARRAAQKERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFEANKHVEDLDTIDKLIADGEASYNKWRHPDPYIVPWAPGGSKFTRNPT
        MSFSSTAGYLARRAAQKERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFEANKHVEDLDTIDKLIA GEAS+NKWRHPDPYIVPWAPGGSKFTRNPT
Subjt:  MSFSSTAGYLARRAAQKERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFEANKHVEDLDTIDKLIADGEASYNKWRHPDPYIVPWAPGGSKFTRNPT

Query:  PPEGVEMVGGFVRVD
        PP G+E++  + R D
Subjt:  PPEGVEMVGGFVRVD

A0A6J1FYY7 Complex I-B221.3e-5388.7Show/hide
Query:  MSFSSTAGYLARRAAQKERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFEANKHVEDLDTIDKLIADGEASYNKWRHPDPYIVPWAPGGSKFTRNPT
        MSFSSTAGYLARRAAQKERVRILYRRALKDTLNWAVHRHLFYRDASDLRERF+ANKHVEDLD ID++IADGEASYNKWRHPDPYIVPWAPGGSKFTRNPT
Subjt:  MSFSSTAGYLARRAAQKERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFEANKHVEDLDTIDKLIADGEASYNKWRHPDPYIVPWAPGGSKFTRNPT

Query:  PPEGVEMVGGFVRVD
        PP G+E++  + R D
Subjt:  PPEGVEMVGGFVRVD

A0A6J1G8K3 Complex I-B228.6e-5389.57Show/hide
Query:  MSFSSTAGYLARRAAQKERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFEANKHVEDLDTIDKLIADGEASYNKWRHPDPYIVPWAPGGSKFTRNPT
        MS SSTAGYLARRAAQ+ERVRILYRRALKDTL WAVHRHLFYRDASDLRERFEANK+VEDLDTIDKLIADGEASYNKWRHPDPYIVPWAPGGSKFTRNPT
Subjt:  MSFSSTAGYLARRAAQKERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFEANKHVEDLDTIDKLIADGEASYNKWRHPDPYIVPWAPGGSKFTRNPT

Query:  PPEGVEMVGGFVRVD
        PP GVE++  + R D
Subjt:  PPEGVEMVGGFVRVD

A0A6J1J845 Complex I-B221.3e-5388.7Show/hide
Query:  MSFSSTAGYLARRAAQKERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFEANKHVEDLDTIDKLIADGEASYNKWRHPDPYIVPWAPGGSKFTRNPT
        MSFSSTAGYLARRAAQKERVRILYRRALKDTLNWAVHRHLFYRDASDLRERF+ANKHVEDLD ID++IADGEASYNKWRHPDPYIVPWAPGGSKFTRNPT
Subjt:  MSFSSTAGYLARRAAQKERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFEANKHVEDLDTIDKLIADGEASYNKWRHPDPYIVPWAPGGSKFTRNPT

Query:  PPEGVEMVGGFVRVD
        PP G+E++  + R D
Subjt:  PPEGVEMVGGFVRVD

A0A6J1L2P5 Complex I-B225.0e-5389.57Show/hide
Query:  MSFSSTAGYLARRAAQKERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFEANKHVEDLDTIDKLIADGEASYNKWRHPDPYIVPWAPGGSKFTRNPT
        MS SSTAGYLARRAAQ+ERVRILYRRALK+TLNWAVHRHLFYRDASDLRERFEANK+VEDLDTIDKLIADGEASYNKWRHPDPYIVPWAPGGSKFTRNPT
Subjt:  MSFSSTAGYLARRAAQKERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFEANKHVEDLDTIDKLIADGEASYNKWRHPDPYIVPWAPGGSKFTRNPT

Query:  PPEGVEMVGGFVRVD
        PP GVE++  + R D
Subjt:  PPEGVEMVGGFVRVD

SwissProt top hitse value%identityAlignment
Q02369 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 96.6e-1034.02Show/hide
Query:  MSFSSTAGYLARRAAQKERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFEANKHVEDLDTIDKLIADGEASYNKWRHPDPYIVPWAPGGSKFTR
        M+F S+  YL      +++V  LY+RAL+   +W +HR  +   A  LR RF+ +K+ +D+    +L+ + E  +   +HP PYI P +PGG+ + R
Subjt:  MSFSSTAGYLARRAAQKERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFEANKHVEDLDTIDKLIADGEASYNKWRHPDPYIVPWAPGGSKFTR

Q0MQE8 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 99.6e-0934.02Show/hide
Query:  MSFSSTAGYLARRAAQKERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFEANKHVEDLDTIDKLIADGEASYNKWRHPDPYIVPWAPGGSKFTR
        M+F ++  YL  R    ++V  LY+RAL+   +W V R  +   A  +R RFE +K+ +D+    +L+ + E  +   +HP PYI P +PGG+ + R
Subjt:  MSFSSTAGYLARRAAQKERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFEANKHVEDLDTIDKLIADGEASYNKWRHPDPYIVPWAPGGSKFTR

Q0MQE9 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 92.1e-0832.99Show/hide
Query:  MSFSSTAGYLARRAAQKERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFEANKHVEDLDTIDKLIADGEASYNKWRHPDPYIVPWAPGGSKFTR
        M+F ++  YL      +++V  LY+RAL+   +W V R  +   A  +R RFE +K+ +D+    +L+ + E  +   +HP PYI P +PGG+ + R
Subjt:  MSFSSTAGYLARRAAQKERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFEANKHVEDLDTIDKLIADGEASYNKWRHPDPYIVPWAPGGSKFTR

Q945M1 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 93.6e-4883.33Show/hide
Query:  MSFSSTAGYLARRAAQKERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFEANKHVEDLDTIDKLIADGEASYNKWRHPDPYIVPWAPGGSKFTRNPT
        MS  STA Y ARRAAQKERVRILYRRALKDTLNWAVHRH+FYRDASDLRE+F  N+ VED+D IDKLIA GEA YNKWRHPDPYIVPWAPGGSKF RNPT
Subjt:  MSFSSTAGYLARRAAQKERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFEANKHVEDLDTIDKLIADGEASYNKWRHPDPYIVPWAPGGSKFTRNPT

Query:  PPEGVEMV
        PP G+E+V
Subjt:  PPEGVEMV

Q9CQJ8 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 91.1e-0934.02Show/hide
Query:  MSFSSTAGYLARRAAQKERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFEANKHVEDLDTIDKLIADGEASYNKWRHPDPYIVPWAPGGSKFTR
        M+F +   YL      +++V  LY+RAL+   +W +HR  +   A  +R RFE +K+ +D+    +L+ + E  + + +HP PYI P +PGG+ F R
Subjt:  MSFSSTAGYLARRAAQKERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFEANKHVEDLDTIDKLIADGEASYNKWRHPDPYIVPWAPGGSKFTR

Arabidopsis top hitse value%identityAlignment
AT4G34700.1 LYR family of Fe/S cluster biogenesis protein2.6e-4983.33Show/hide
Query:  MSFSSTAGYLARRAAQKERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFEANKHVEDLDTIDKLIADGEASYNKWRHPDPYIVPWAPGGSKFTRNPT
        MS  STA Y ARRAAQKERVRILYRRALKDTLNWAVHRH+FYRDASDLRE+F  N+ VED+D IDKLIA GEA YNKWRHPDPYIVPWAPGGSKF RNPT
Subjt:  MSFSSTAGYLARRAAQKERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFEANKHVEDLDTIDKLIADGEASYNKWRHPDPYIVPWAPGGSKFTRNPT

Query:  PPEGVEMV
        PP G+E+V
Subjt:  PPEGVEMV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTTTTTCGTCGACGGCGGGATATTTGGCTCGGCGAGCTGCCCAGAAGGAGAGGGTTCGGATCCTTTACCGGCGAGCTCTCAAAGACACTCTCAATTGGGCTGTTCA
TCGCCATCTCTTTTACCGAGATGCGTCGGACCTCCGGGAGAGATTCGAGGCAAACAAACACGTGGAAGATCTTGACACAATAGACAAACTGATAGCTGATGGGGAAGCTT
CCTATAATAAGTGGCGACATCCTGATCCCTATATCGTTCCTTGGGCTCCTGGTGGTTCTAAGTTTACGCGAAACCCAACTCCACCTGAAGGGGTTGAAATGGTTGGTGGC
TTTGTGAGAGTTGATGATGATAAAAGGAGCTCTTTGATGTGTAAACTTGAATGA
mRNA sequenceShow/hide mRNA sequence
ATCGAAACCACAAACAACACAGTAGATACAAGGCATCTGAAGAAGAAGAAGAGAGAGAAAGTGAGAGATGAGTTTTTCGTCGACGGCGGGATATTTGGCTCGGCGAGCTG
CCCAGAAGGAGAGGGTTCGGATCCTTTACCGGCGAGCTCTCAAAGACACTCTCAATTGGGCTGTTCATCGCCATCTCTTTTACCGAGATGCGTCGGACCTCCGGGAGAGA
TTCGAGGCAAACAAACACGTGGAAGATCTTGACACAATAGACAAACTGATAGCTGATGGGGAAGCTTCCTATAATAAGTGGCGACATCCTGATCCCTATATCGTTCCTTG
GGCTCCTGGTGGTTCTAAGTTTACGCGAAACCCAACTCCACCTGAAGGGGTTGAAATGGTTGGTGGCTTTGTGAGAGTTGATGATGATAAAAGGAGCTCTTTGATGTGTA
AACTTGAATGAACACAAATTATAGTGATTCCTTGTTGATTTGCTTTCTACTTTTTGTTCAGATATGCAAATTTGACATAGAAAAAATCACCATTGGAACGGTGTGTGATA
GTACAACTTTTGGTTAATTTAAGCGTTCATCCTTCGCATGTACCTAATTTTTTTGTGAATGTGGCTAATTTTTCTTTTTCCTTTTGGTGGGGACTTTAGCTACGGAAGTC
TTCAGGATGAGCAGTTTGCCTCATTGCTTGTAATTGCAGCAGATGTTGAAATTGTGAGGCTTACATGAATTTTTAAACAATAGGAAATGAATTTAGC
Protein sequenceShow/hide protein sequence
MSFSSTAGYLARRAAQKERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFEANKHVEDLDTIDKLIADGEASYNKWRHPDPYIVPWAPGGSKFTRNPTPPEGVEMVGG
FVRVDDDKRSSLMCKLE