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CcUC11G212370 (gene) of Watermelon (PI 537277) v1 genome

Gene IDCcUC11G212370
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionSqualene synthase
Genome locationCicolChr11:4262677..4268282
RNA-Seq ExpressionCcUC11G212370
SyntenyCcUC11G212370
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
No hits found
TrEMBL top hitse value%identityAlignment
A0A2P2LV77 Squalene synthase6.5e-0569.23Show/hide
Query:  MRLRWDLLLRMSSGHFQFQKRVKIIWVFQNCPQTPHFSL
        MRL  DLLLR+   HFQ Q+ VKIIWVFQNC Q+PHF L
Subjt:  MRLRWDLLLRMSSGHFQFQKRVKIIWVFQNCPQTPHFSL
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CCGGTAAGATCCTTACCGGAGTTTGACGCTCATACAGATTGGTTGGCTGGTAACCGTTTGGCAGAGAGATATGCGAGAATGATGCATAGTAGGCTGAAAAGTATGACAAT
CTGGATTCGAACAGCACACATCATCAGATATTCTTACATGAACGATGTTCAGAGGGCGCAGAGGAATTTAAGGTTGAAAGATAGGAAAGAGAGAGACTTGAGGACGGATA
ACACAAACCTCTTGTTCAAGAGCCCCGACTGCTTGCATGTTTGCTGTATTGCCTCGATCCTGCTCAGGATTTCAAACCGTAACAATGTTCCAAATCATAAGCATGGTATA
GCAAAATCCCCAATGAGGCTCAGGTGGGATCTGCTTCTCCGCATGTCTAGCGGCCATTTTCAGTTTCAAAAGCGGGTAAAAATCATCTGGGTGTTTCAAAATTGCCCCCA
AACTCCCCATTTCTCGCTCTCAAAACCACAGAGCTTCAGATCTCTCGCTGGTCAACCCGTAAAACAAATGCCCAATTCCTCAAATGGGATTCCAATTCTTCAATTGATGA
TGAGAAATTCAAAAATCAAAATCAAAATCAAAATGTTTGTTGAGATCCTTCCTGTACTCAGAGATTGGAAAGAAAAAACGTGA
mRNA sequenceShow/hide mRNA sequence
CCGGTAAGATCCTTACCGGAGTTTGACGCTCATACAGATTGGTTGGCTGGTAACCGTTTGGCAGAGAGATATGCGAGAATGATGCATAGTAGGCTGAAAAGTATGACAAT
CTGGATTCGAACAGCACACATCATCAGATATTCTTACATGAACGATGTTCAGAGGGCGCAGAGGAATTTAAGGTTGAAAGATAGGAAAGAGAGAGACTTGAGGACGGATA
ACACAAACCTCTTGTTCAAGAGCCCCGACTGCTTGCATGTTTGCTGTATTGCCTCGATCCTGCTCAGGATTTCAAACCGTAACAATGTTCCAAATCATAAGCATGGTATA
GCAAAATCCCCAATGAGGCTCAGGTGGGATCTGCTTCTCCGCATGTCTAGCGGCCATTTTCAGTTTCAAAAGCGGGTAAAAATCATCTGGGTGTTTCAAAATTGCCCCCA
AACTCCCCATTTCTCGCTCTCAAAACCACAGAGCTTCAGATCTCTCGCTGGTCAACCCGTAAAACAAATGCCCAATTCCTCAAATGGGATTCCAATTCTTCAATTGATGA
TGAGAAATTCAAAAATCAAAATCAAAATCAAAATGTTTGTTGAGATCCTTCCTGTACTCAGAGATTGGAAAGAAAAAACGTGA
Protein sequenceShow/hide protein sequence
PVRSLPEFDAHTDWLAGNRLAERYARMMHSRLKSMTIWIRTAHIIRYSYMNDVQRAQRNLRLKDRKERDLRTDNTNLLFKSPDCLHVCCIASILLRISNRNNVPNHKHGI
AKSPMRLRWDLLLRMSSGHFQFQKRVKIIWVFQNCPQTPHFSLSKPQSFRSLAGQPVKQMPNSSNGIPILQLMMRNSKIKIKIKMFVEILPVLRDWKEKT