; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CcUC11G212910 (gene) of Watermelon (PI 537277) v1 genome

Gene IDCcUC11G212910
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionATP-dependent Clp protease proteolytic subunit
Genome locationCicolChr11:4934285..4938627
RNA-Seq ExpressionCcUC11G212910
SyntenyCcUC11G212910
Gene Ontology termsGO:0006515 - protein quality control for misfolded or incompletely synthesized proteins (biological process)
GO:0009368 - endopeptidase Clp complex (cellular component)
GO:0009526 - plastid envelope (cellular component)
GO:0009570 - chloroplast stroma (cellular component)
GO:0004176 - ATP-dependent peptidase activity (molecular function)
GO:0004252 - serine-type endopeptidase activity (molecular function)
GO:0051117 - ATPase binding (molecular function)
InterPro domainsIPR001907 - ATP-dependent Clp protease proteolytic subunit
IPR023562 - Clp protease proteolytic subunit /Translocation-enhancing protein TepA
IPR029045 - ClpP/crotonase-like domain superfamily
IPR033135 - ClpP, histidine active site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6605088.1 ATP-dependent Clp protease proteolytic subunit 6, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]6.2e-13191.76Show/hide
Query:  MVVASAFTASLSFSVSSHNRTSSISQLSRRNSHRSIVSALPRPYGDPSTIGLSSKTMGAPLNLDDKDFLLTSTSYGPIEAKKGNPSIMPAVMTPGGPLDL
        MVVASAFTASL FSVSSHNR SS+ QLS RNS RSIVSA+PRPYGD STIGLSSKT+GAPLNLD+ DFL TSTSYGPI AKKGNP IMPAVMTPGGPL+L
Subjt:  MVVASAFTASLSFSVSSHNRTSSISQLSRRNSHRSIVSALPRPYGDPSTIGLSSKTMGAPLNLDDKDFLLTSTSYGPIEAKKGNPSIMPAVMTPGGPLDL

Query:  SSVLFRNRIIFIGQPVNSIVAQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSRI
        SSVLFRNRIIFIGQP+NS VAQRVISQLVTLATIDE++DILVYLNCPGGSTYS+LAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSRI
Subjt:  SSVLFRNRIIFIGQPVNSIVAQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSRI

Query:  MIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDMMYAAFTGQPIEKVQQYTERDRFLSASEALEFGLID
        MIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDMMYAAFTGQP+EKVQQYTERDRFLS SEALEFGLID
Subjt:  MIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDMMYAAFTGQPIEKVQQYTERDRFLSASEALEFGLID

XP_008457934.1 PREDICTED: ATP-dependent Clp protease proteolytic subunit 6, chloroplastic isoform X1 [Cucumis melo]4.1e-13595.13Show/hide
Query:  MVVASAFTASLSFSVSSHNRTSSISQLSRRNSHRSIVSALPRPYGDPSTIGLSSKTMGAPLNLDDKDFLLTSTSYGPIEAKKGNPSIMPAVMTPGGPLDL
        MVVAS FTASL+FSV+S NRTSSI QLSRR SHRSIVSALPRPYGD STIGLSSKT GAPLNLDDKDFLLTSTSYGPIEA+KGNP IMPAVMTPGGPLDL
Subjt:  MVVASAFTASLSFSVSSHNRTSSISQLSRRNSHRSIVSALPRPYGDPSTIGLSSKTMGAPLNLDDKDFLLTSTSYGPIEAKKGNPSIMPAVMTPGGPLDL

Query:  SSVLFRNRIIFIGQPVNSIVAQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSRI
        SSVLFRNRIIFIGQPVNS VAQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSRI
Subjt:  SSVLFRNRIIFIGQPVNSIVAQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSRI

Query:  MIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDMMYAAFTGQPIEKVQQYTERDRFLSASEALEFGLID
        MIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDMMYAAFTGQ IEKVQQYTERDRFLS SEALEFGLID
Subjt:  MIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDMMYAAFTGQPIEKVQQYTERDRFLSASEALEFGLID

XP_022948075.1 ATP-dependent Clp protease proteolytic subunit 6, chloroplastic [Cucurbita moschata]1.2e-13192.13Show/hide
Query:  MVVASAFTASLSFSVSSHNRTSSISQLSRRNSHRSIVSALPRPYGDPSTIGLSSKTMGAPLNLDDKDFLLTSTSYGPIEAKKGNPSIMPAVMTPGGPLDL
        MVVASAFTASL FSVSSHNR SS+ QLSRRNS RSIVSA+PRPYGD STIGLSSKT+GAPLNLD+ DFL TSTSYGPI AKKGNP IMPAVMTPGGPL+L
Subjt:  MVVASAFTASLSFSVSSHNRTSSISQLSRRNSHRSIVSALPRPYGDPSTIGLSSKTMGAPLNLDDKDFLLTSTSYGPIEAKKGNPSIMPAVMTPGGPLDL

Query:  SSVLFRNRIIFIGQPVNSIVAQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSRI
        SSVLFRNRIIFIGQP+NS VAQRVISQLVTLATIDE++DILVYLNCPGGSTYS+LAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSRI
Subjt:  SSVLFRNRIIFIGQPVNSIVAQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSRI

Query:  MIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDMMYAAFTGQPIEKVQQYTERDRFLSASEALEFGLID
        MIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDMMYAAFTGQP+EKVQQYTERDRFLS SEALEFGLID
Subjt:  MIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDMMYAAFTGQPIEKVQQYTERDRFLSASEALEFGLID

XP_038902836.1 ATP-dependent Clp protease proteolytic subunit 6, chloroplastic isoform X1 [Benincasa hispida]6.8e-13895.88Show/hide
Query:  MVVASAFTASLSFSVSSHNRTSSISQLSRRNSHRSIVSALPRPYGDPSTIGLSSKTMGAPLNLDDKDFLLTSTSYGPIEAKKGNPSIMPAVMTPGGPLDL
        M VASAFTASLSFSVSSHNRTSSISQLSRRNSHRSIVSALPRPYGD STIGLSSKTMG PL++DDKDFL TSTSYGPIEA+KGNP IMPAVMTPGGPLDL
Subjt:  MVVASAFTASLSFSVSSHNRTSSISQLSRRNSHRSIVSALPRPYGDPSTIGLSSKTMGAPLNLDDKDFLLTSTSYGPIEAKKGNPSIMPAVMTPGGPLDL

Query:  SSVLFRNRIIFIGQPVNSIVAQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSRI
        SSVLFRNRIIFIGQPVNSIVAQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSRI
Subjt:  SSVLFRNRIIFIGQPVNSIVAQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSRI

Query:  MIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDMMYAAFTGQPIEKVQQYTERDRFLSASEALEFGLID
        MIHQPQSGCGGHVEDVRRQVNEAVQSRHK+D MYAAFTGQPIEKVQQYTERDRFLS SEALEFGLID
Subjt:  MIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDMMYAAFTGQPIEKVQQYTERDRFLSASEALEFGLID

XP_038902837.1 ATP-dependent Clp protease proteolytic subunit 6, chloroplastic isoform X2 [Benincasa hispida]3.0e-13395.75Show/hide
Query:  MVVASAFTASLSFSVSSHNRTSSISQLSRRNSHRSIVSALPRPYGDPSTIGLSSKTMGAPLNLDDKDFLLTSTSYGPIEAKKGNPSIMPAVMTPGGPLDL
        M VASAFTASLSFSVSSHNRTSSISQLSRRNSHRSIVSALPRPYGD STIGLSSKTMG PL++DDKDFL TSTSYGPIEA+KGNP IMPAVMTPGGPLDL
Subjt:  MVVASAFTASLSFSVSSHNRTSSISQLSRRNSHRSIVSALPRPYGDPSTIGLSSKTMGAPLNLDDKDFLLTSTSYGPIEAKKGNPSIMPAVMTPGGPLDL

Query:  SSVLFRNRIIFIGQPVNSIVAQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSRI
        SSVLFRNRIIFIGQPVNSIVAQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSRI
Subjt:  SSVLFRNRIIFIGQPVNSIVAQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSRI

Query:  MIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDMMYAAFTGQPIEKVQQYTERDRFLSASE
        MIHQPQSGCGGHVEDVRRQVNEAVQSRHK+D MYAAFTGQPIEKVQQYTERDRFLS SE
Subjt:  MIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDMMYAAFTGQPIEKVQQYTERDRFLSASE

TrEMBL top hitse value%identityAlignment
A0A0A0LLX4 ATP-dependent Clp protease proteolytic subunit7.6e-12788.01Show/hide
Query:  MVVASAFTASLSFSVSSHNRTSSISQLSRRNSHRSIVSALPRPYGDPSTIGLSSKTMGAPLNLDDKDFLLTSTSYGPIEAKKGNPSIMPAVMTPGGPLDL
        MVVAS FTASLSFSV+S+NR SSISQLSRRNSHRSIVSA PRPYGD STIGLSSKT GAPLNLDDKDFL TSTSY PI A++ NP +MPAVMTPGGPLDL
Subjt:  MVVASAFTASLSFSVSSHNRTSSISQLSRRNSHRSIVSALPRPYGDPSTIGLSSKTMGAPLNLDDKDFLLTSTSYGPIEAKKGNPSIMPAVMTPGGPLDL

Query:  SSVLFRNRIIFIGQPVNSIVAQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSRI
        SSVLFRNRIIFIGQP+NS VAQRVISQLVTLATIDEDADILVYLNCPGGSTYS+LAIYDCMSWIKPKVGTVCFG+ ASQGALLLAGGEKGMRYAMPNSRI
Subjt:  SSVLFRNRIIFIGQPVNSIVAQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSRI

Query:  MIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDMMYAAFTGQPIEKVQQYTERDRFLSASEALEFGLID
        MIHQPQSGCGG VEDVRRQVNEAVQSR+K++ MYAAFTGQ IE +QQY +RDRFLS SEAL+FGLID
Subjt:  MIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDMMYAAFTGQPIEKVQQYTERDRFLSASEALEFGLID

A0A1S3C7Y1 ATP-dependent Clp protease proteolytic subunit2.0e-13595.13Show/hide
Query:  MVVASAFTASLSFSVSSHNRTSSISQLSRRNSHRSIVSALPRPYGDPSTIGLSSKTMGAPLNLDDKDFLLTSTSYGPIEAKKGNPSIMPAVMTPGGPLDL
        MVVAS FTASL+FSV+S NRTSSI QLSRR SHRSIVSALPRPYGD STIGLSSKT GAPLNLDDKDFLLTSTSYGPIEA+KGNP IMPAVMTPGGPLDL
Subjt:  MVVASAFTASLSFSVSSHNRTSSISQLSRRNSHRSIVSALPRPYGDPSTIGLSSKTMGAPLNLDDKDFLLTSTSYGPIEAKKGNPSIMPAVMTPGGPLDL

Query:  SSVLFRNRIIFIGQPVNSIVAQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSRI
        SSVLFRNRIIFIGQPVNS VAQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSRI
Subjt:  SSVLFRNRIIFIGQPVNSIVAQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSRI

Query:  MIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDMMYAAFTGQPIEKVQQYTERDRFLSASEALEFGLID
        MIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDMMYAAFTGQ IEKVQQYTERDRFLS SEALEFGLID
Subjt:  MIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDMMYAAFTGQPIEKVQQYTERDRFLSASEALEFGLID

A0A6J1D5M0 ATP-dependent Clp protease proteolytic subunit2.5e-13091.35Show/hide
Query:  VVASAFTASLSFSVSSHNRTSSISQLSRRNSHRSIVSALPRPYGDPSTIGLSSKTMGAPLNLDDKDFLLTSTSYGPIEAKKGNPSIMPAVMTPGGPLDLS
        + ASAFTASL+FSVSS+NRTSSI  LSRRNS RS+VS LPRPYGD STIGLSSK++ APL+LDDKDFL  STSY PIEAKKGNP IMPAVMTPGGPLDLS
Subjt:  VVASAFTASLSFSVSSHNRTSSISQLSRRNSHRSIVSALPRPYGDPSTIGLSSKTMGAPLNLDDKDFLLTSTSYGPIEAKKGNPSIMPAVMTPGGPLDLS

Query:  SVLFRNRIIFIGQPVNSIVAQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSRIM
        SVLFRNRIIFIGQPVNSIVAQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSRIM
Subjt:  SVLFRNRIIFIGQPVNSIVAQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSRIM

Query:  IHQPQSGCGGHVEDVRRQVNEAVQSRHKVDMMYAAFTGQPIEKVQQYTERDRFLSASEALEFGLID
        IHQPQSGCGGHVEDVRRQVNEAVQSRHKVD M++AFTGQP+EKVQQYTERDRFLS SEALEFGLID
Subjt:  IHQPQSGCGGHVEDVRRQVNEAVQSRHKVDMMYAAFTGQPIEKVQQYTERDRFLSASEALEFGLID

A0A6J1G8P9 ATP-dependent Clp protease proteolytic subunit6.0e-13292.13Show/hide
Query:  MVVASAFTASLSFSVSSHNRTSSISQLSRRNSHRSIVSALPRPYGDPSTIGLSSKTMGAPLNLDDKDFLLTSTSYGPIEAKKGNPSIMPAVMTPGGPLDL
        MVVASAFTASL FSVSSHNR SS+ QLSRRNS RSIVSA+PRPYGD STIGLSSKT+GAPLNLD+ DFL TSTSYGPI AKKGNP IMPAVMTPGGPL+L
Subjt:  MVVASAFTASLSFSVSSHNRTSSISQLSRRNSHRSIVSALPRPYGDPSTIGLSSKTMGAPLNLDDKDFLLTSTSYGPIEAKKGNPSIMPAVMTPGGPLDL

Query:  SSVLFRNRIIFIGQPVNSIVAQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSRI
        SSVLFRNRIIFIGQP+NS VAQRVISQLVTLATIDE++DILVYLNCPGGSTYS+LAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSRI
Subjt:  SSVLFRNRIIFIGQPVNSIVAQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSRI

Query:  MIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDMMYAAFTGQPIEKVQQYTERDRFLSASEALEFGLID
        MIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDMMYAAFTGQP+EKVQQYTERDRFLS SEALEFGLID
Subjt:  MIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDMMYAAFTGQPIEKVQQYTERDRFLSASEALEFGLID

A0A6J1KXP8 ATP-dependent Clp protease proteolytic subunit3.0e-13191.39Show/hide
Query:  MVVASAFTASLSFSVSSHNRTSSISQLSRRNSHRSIVSALPRPYGDPSTIGLSSKTMGAPLNLDDKDFLLTSTSYGPIEAKKGNPSIMPAVMTPGGPLDL
        M VASAFTASL FSVSSHNR SS+ QLSRRNS RSIVSA+PRPYGD STIGLSSKT+G PLNLD+ DFL TSTSYGPI AKKGNP IMPAVMTPGGPL+L
Subjt:  MVVASAFTASLSFSVSSHNRTSSISQLSRRNSHRSIVSALPRPYGDPSTIGLSSKTMGAPLNLDDKDFLLTSTSYGPIEAKKGNPSIMPAVMTPGGPLDL

Query:  SSVLFRNRIIFIGQPVNSIVAQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSRI
        SSVLFRNRIIFIGQP+NS VAQRVISQLVTLATIDE++DILVYLNCPGGSTYS+LAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSRI
Subjt:  SSVLFRNRIIFIGQPVNSIVAQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSRI

Query:  MIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDMMYAAFTGQPIEKVQQYTERDRFLSASEALEFGLID
        MIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDMMYAAFTGQP+EKVQQYTERDRFLS SEALEFGLID
Subjt:  MIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDMMYAAFTGQPIEKVQQYTERDRFLSASEALEFGLID

SwissProt top hitse value%identityAlignment
B4UAX9 ATP-dependent Clp protease proteolytic subunit1.2e-4151.48Show/hide
Query:  DLSSVLFRNRIIFIGQPVNSIVAQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNS
        D+ S L ++RIIF+G PV+  VA  +I+QL+ L + D D DI +Y+N PGGS  S LAIYD M ++KP+V T+C G AAS GA LLAGG  G R+A+PN+
Subjt:  DLSSVLFRNRIIFIGQPVNSIVAQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNS

Query:  RIMIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDMMYAAFTGQPIEKVQQYTERDRFLSASEALEFGLID
        RIMIHQ   G  G   D+  Q  EA++ + K++ + A  T QPIE++++ TERD F+SA EA E+GLID
Subjt:  RIMIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDMMYAAFTGQPIEKVQQYTERDRFLSASEALEFGLID

B8J5G7 ATP-dependent Clp protease proteolytic subunit1.2e-4151.48Show/hide
Query:  DLSSVLFRNRIIFIGQPVNSIVAQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNS
        D+ S L ++RIIF+G PV+  VA  +I+QL+ L + D D DI +Y+N PGGS  S LAIYD M ++KP+V T+C G AAS GA LLAGG  G R+A+PN+
Subjt:  DLSSVLFRNRIIFIGQPVNSIVAQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNS

Query:  RIMIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDMMYAAFTGQPIEKVQQYTERDRFLSASEALEFGLID
        RIMIHQ   G  G   D+  Q  EA++ + K++ + A  T QPIE++++ TERD F+SA EA E+GLID
Subjt:  RIMIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDMMYAAFTGQPIEKVQQYTERDRFLSASEALEFGLID

Q2IEW1 ATP-dependent Clp protease proteolytic subunit1.2e-4151.48Show/hide
Query:  DLSSVLFRNRIIFIGQPVNSIVAQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNS
        D+ S L ++RIIF+G PV+  VA  +I+QL+ L + D D DI +Y+N PGGS  S LAIYD M ++KP+V T+C G AAS GA LLAGG  G R+A+PN+
Subjt:  DLSSVLFRNRIIFIGQPVNSIVAQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNS

Query:  RIMIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDMMYAAFTGQPIEKVQQYTERDRFLSASEALEFGLID
        RIMIHQ   G  G   D+  Q  EA++ + K++ + A  T QPIE++++ TERD F+SA EA E+GLID
Subjt:  RIMIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDMMYAAFTGQPIEKVQQYTERDRFLSASEALEFGLID

Q59993 ATP-dependent Clp protease proteolytic subunit 23.9e-4347.72Show/hide
Query:  PIEAKKGN--PSIMPAVMTPGG----PLDLSSVLFRNRIIFIGQPVNSIVAQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGT
        P+    GN   S++P V+   G      D+ S L R RIIF+G PV+  VA  +++QL+ L   D + DI +Y+N PGGS Y+ LAIYD M  I+P V T
Subjt:  PIEAKKGN--PSIMPAVMTPGG----PLDLSSVLFRNRIIFIGQPVNSIVAQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGT

Query:  VCFGVAASQGALLLAGGEKGMRYAMPNSRIMIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDMMYAAFTGQPIEKVQQYTERDRFLSASEALEFGLID
        +CFG+AAS GA LL+GG KG R A+P+SRIMIHQP  G  G   ++  Q  E +  + +++ M    TGQP+EK+Q+ TERD F+SA EA E+GLID
Subjt:  VCFGVAASQGALLLAGGEKGMRYAMPNSRIMIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDMMYAAFTGQPIEKVQQYTERDRFLSASEALEFGLID

Q9SAA2 ATP-dependent Clp protease proteolytic subunit 6, chloroplastic2.1e-10575.58Show/hide
Query:  LSFSVSSHN-RTSSISQLSRRNSHRSIVSALPRPYGDPSTIGLSSKTMGAPLNLDDKDFLLTSTSYGPIEAKKGNPSIMPAVMTPGGPLDLSSVLFRNRI
        LSFS  + N + +S    ++RN  R IVSAL  PYGD    GLSS   G+P+ +D+K     +  +G IEAKKGNP +MP+VMTPGGPLDLSSVLFRNRI
Subjt:  LSFSVSSHN-RTSSISQLSRRNSHRSIVSALPRPYGDPSTIGLSSKTMGAPLNLDDKDFLLTSTSYGPIEAKKGNPSIMPAVMTPGGPLDLSSVLFRNRI

Query:  IFIGQPVNSIVAQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSRIMIHQPQSGC
        IFIGQP+N+ VAQRVISQLVTLA+ID+ +DIL+YLNCPGGSTYSVLAIYDCMSWIKPKVGTV FGVAASQGALLLAGGEKGMRYAMPN+R+MIHQPQ+GC
Subjt:  IFIGQPVNSIVAQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSRIMIHQPQSGC

Query:  GGHVEDVRRQVNEAVQSRHKVDMMYAAFTGQPIEKVQQYTERDRFLSASEALEFGLID
        GGHVEDVRRQVNEA+++R K+D MYAAFTGQP+EKVQQYTERDRFLSASEALEFGLID
Subjt:  GGHVEDVRRQVNEAVQSRHKVDMMYAAFTGQPIEKVQQYTERDRFLSASEALEFGLID

Arabidopsis top hitse value%identityAlignment
AT1G02560.1 nuclear encoded CLP protease 55.0e-3842.86Show/hide
Query:  DFLLTSTSYGPIEAKKGNPSIMPAVMTPGGPLDLSSVLFRNRIIFIGQPVNSIVAQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKP
        D  + S+ Y P  A+   P  M           + S LF+ RII  G  V+  +A  +++QL+ L  +D   DI++Y+N PGGS  + +AI+D M  I+P
Subjt:  DFLLTSTSYGPIEAKKGNPSIMPAVMTPGGPLDLSSVLFRNRIIFIGQPVNSIVAQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKP

Query:  KVGTVCFGVAASQGALLLAGGEKGMRYAMPNSRIMIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDMMYAAFTGQPIEKVQQYTERDRFLSASEALEFGLI
         V TVC G+AAS GA LL+ G KG RY++PNSRIMIHQP  G  G   D+  Q NE +  +  ++   A  TGQ +EK+ Q T+RD F+SA EA E+GLI
Subjt:  KVGTVCFGVAASQGALLLAGGEKGMRYAMPNSRIMIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDMMYAAFTGQPIEKVQQYTERDRFLSASEALEFGLI

Query:  DVCGIIFSKL
        D  G+I + L
Subjt:  DVCGIIFSKL

AT1G11750.1 CLP protease proteolytic subunit 61.5e-10675.58Show/hide
Query:  LSFSVSSHN-RTSSISQLSRRNSHRSIVSALPRPYGDPSTIGLSSKTMGAPLNLDDKDFLLTSTSYGPIEAKKGNPSIMPAVMTPGGPLDLSSVLFRNRI
        LSFS  + N + +S    ++RN  R IVSAL  PYGD    GLSS   G+P+ +D+K     +  +G IEAKKGNP +MP+VMTPGGPLDLSSVLFRNRI
Subjt:  LSFSVSSHN-RTSSISQLSRRNSHRSIVSALPRPYGDPSTIGLSSKTMGAPLNLDDKDFLLTSTSYGPIEAKKGNPSIMPAVMTPGGPLDLSSVLFRNRI

Query:  IFIGQPVNSIVAQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSRIMIHQPQSGC
        IFIGQP+N+ VAQRVISQLVTLA+ID+ +DIL+YLNCPGGSTYSVLAIYDCMSWIKPKVGTV FGVAASQGALLLAGGEKGMRYAMPN+R+MIHQPQ+GC
Subjt:  IFIGQPVNSIVAQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSRIMIHQPQSGC

Query:  GGHVEDVRRQVNEAVQSRHKVDMMYAAFTGQPIEKVQQYTERDRFLSASEALEFGLID
        GGHVEDVRRQVNEA+++R K+D MYAAFTGQP+EKVQQYTERDRFLSASEALEFGLID
Subjt:  GGHVEDVRRQVNEAVQSRHKVDMMYAAFTGQPIEKVQQYTERDRFLSASEALEFGLID

AT1G11750.2 CLP protease proteolytic subunit 63.3e-10673.43Show/hide
Query:  LSFSVSSHN-RTSSISQLSRRNSHRSIVSALPRPYGDPSTIGLSSKTMGAPLNLDDK----------DFLLTSTSY---GPIEAKKGNPSIMPAVMTPGG
        LSFS  + N + +S    ++RN  R IVSAL  PYGD    GLSS   G+P+ +D+K          + L +ST Y   G IEAKKGNP +MP+VMTPGG
Subjt:  LSFSVSSHN-RTSSISQLSRRNSHRSIVSALPRPYGDPSTIGLSSKTMGAPLNLDDK----------DFLLTSTSY---GPIEAKKGNPSIMPAVMTPGG

Query:  PLDLSSVLFRNRIIFIGQPVNSIVAQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMP
        PLDLSSVLFRNRIIFIGQP+N+ VAQRVISQLVTLA+ID+ +DIL+YLNCPGGSTYSVLAIYDCMSWIKPKVGTV FGVAASQGALLLAGGEKGMRYAMP
Subjt:  PLDLSSVLFRNRIIFIGQPVNSIVAQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMP

Query:  NSRIMIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDMMYAAFTGQPIEKVQQYTERDRFLSASEALEFGLID
        N+R+MIHQPQ+GCGGHVEDVRRQVNEA+++R K+D MYAAFTGQP+EKVQQYTERDRFLSASEALEFGLID
Subjt:  NSRIMIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDMMYAAFTGQPIEKVQQYTERDRFLSASEALEFGLID

AT1G66670.1 CLP protease proteolytic subunit 36.6e-3841.58Show/hide
Query:  IEAKKGNPSIMPAVMTPGGPLDLSSVLFRNRIIFIGQPVNSIVAQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAA
        I++   +PS +P+       LD +++L R RI+F+G  V+ + A  VISQL+ L   D + DI +++N PGGS  + + IYD M   K  V TVC G+AA
Subjt:  IEAKKGNPSIMPAVMTPGGPLDLSSVLFRNRIIFIGQPVNSIVAQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAA

Query:  SQGALLLAGGEKGMRYAMPNSRIMIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDMMYAAFTGQPIEKVQQYTERDRFLSASEALEFGLID
        S GA LLA G KG RY MPNS++MIHQP    GG   ++  ++ E +  + K++ +++  TG+P  +++  T+RD FL+  EA E+GLID
Subjt:  SQGALLLAGGEKGMRYAMPNSRIMIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDMMYAAFTGQPIEKVQQYTERDRFLSASEALEFGLID

AT5G45390.1 CLP protease P45.7e-3435.02Show/hide
Query:  SFSVSSHNRTSSISQLSRRNSHRSIVSALPRPYGDPSTIGLS-SKTMGAPLNLDDKDFLLTSTSYGPIEAKKGNPSIMPAVMTPGGPLDLSSVLFRNRII
        + S+SS  + S +S  SR NS  S  S+    +  P+ + L  +K +  PL       L  + +   IE  +   S +      G   D+  +L R RI+
Subjt:  SFSVSSHNRTSSISQLSRRNSHRSIVSALPRPYGDPSTIGLS-SKTMGAPLNLDDKDFLLTSTSYGPIEAKKGNPSIMPAVMTPGGPLDLSSVLFRNRII

Query:  FIGQPVNSIVAQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSRIMIHQPQSGCG
        F+G  ++  VA  ++SQL+ L   D   DI +++N PGGS  + +AIYD +  ++  V T+  G+AAS  +++L  G KG R+AMPN+RIMIHQP  G  
Subjt:  FIGQPVNSIVAQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSRIMIHQPQSGCG

Query:  GHVEDVRRQVNEAVQSRHKVDMMYAAFTGQPIEKVQQYTERDRFLSASEALEFGLID
        G   DV  Q  E + +++ V  + A  T +  E+V +  +RDR++S  EA+E+GLID
Subjt:  GHVEDVRRQVNEAVQSRHKVDMMYAAFTGQPIEKVQQYTERDRFLSASEALEFGLID


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTAGTAGCTTCAGCTTTTACTGCATCTCTCAGTTTCTCTGTCTCTTCGCACAATCGAACGTCATCCATTTCTCAACTTTCTCGAAGAAATTCACACAGGTCG
ATAGTATCTGCCTTGCCGAGGCCATATGGTGACCCTTCGACAATTGGATTATCGAGTAAAACAATGGGGGCACCTCTAAACCTTGACGATAAAGACTTTCTTCTC
ACCAGTACAAGTTATGGACCTATAGAGGCTAAGAAAGGTAATCCATCCATTATGCCTGCAGTGATGACACCAGGAGGGCCTTTGGATCTCTCTTCTGTGTTATTT
AGGAATCGTATTATATTTATTGGTCAACCTGTCAACTCTATCGTGGCACAGCGAGTCATATCACAACTTGTGACTTTAGCAACAATTGATGAGGATGCAGATATC
CTGGTGTATCTGAATTGCCCTGGTGGAAGTACATACTCGGTATTAGCAATTTATGATTGTATGTCTTGGATAAAGCCTAAGGTTGGTACAGTGTGCTTCGGAGTT
GCTGCAAGCCAAGGGGCTCTTCTCCTTGCAGGTGGAGAAAAGGGGATGCGCTATGCCATGCCAAATTCTCGAATTATGATACATCAGCCACAAAGTGGATGTGGG
GGTCATGTGGAGGATGTTAGACGTCAAGTCAATGAAGCAGTTCAATCACGCCATAAAGTTGACATGATGTATGCTGCATTTACTGGCCAACCTATAGAGAAAGTA
CAACAATACACGGAGAGGGATCGGTTTTTGTCTGCTTCCGAGGCGTTAGAGTTTGGGCTTATTGACGTGTGCGGAATCATCTTCTCCAAGCTTTGGTACAGAATA
TCAAAATTTCGGTCCGAATTTTCCAGCGCTGTGTGTCGTTTCATTGGTGAACTCCCAAATTCTCTAATCAATGCTCAGGAGCTAGCAATTGAGAACACGATGAGA
TGA
mRNA sequenceShow/hide mRNA sequence
GCCTCATCGATATTGTTGTAATTTCCATTAGTCTCTTTTGGTTTCACAGTGAAGCTCGAGAACACAGCGCCATTCTCACAATCTTCGCTCAAAATGGTAGTAGCT
TCAGCTTTTACTGCATCTCTCAGTTTCTCTGTCTCTTCGCACAATCGAACGTCATCCATTTCTCAACTTTCTCGAAGAAATTCACACAGGTCGATAGTATCTGCC
TTGCCGAGGCCATATGGTGACCCTTCGACAATTGGATTATCGAGTAAAACAATGGGGGCACCTCTAAACCTTGACGATAAAGACTTTCTTCTCACCAGTACAAGT
TATGGACCTATAGAGGCTAAGAAAGGTAATCCATCCATTATGCCTGCAGTGATGACACCAGGAGGGCCTTTGGATCTCTCTTCTGTGTTATTTAGGAATCGTATT
ATATTTATTGGTCAACCTGTCAACTCTATCGTGGCACAGCGAGTCATATCACAACTTGTGACTTTAGCAACAATTGATGAGGATGCAGATATCCTGGTGTATCTG
AATTGCCCTGGTGGAAGTACATACTCGGTATTAGCAATTTATGATTGTATGTCTTGGATAAAGCCTAAGGTTGGTACAGTGTGCTTCGGAGTTGCTGCAAGCCAA
GGGGCTCTTCTCCTTGCAGGTGGAGAAAAGGGGATGCGCTATGCCATGCCAAATTCTCGAATTATGATACATCAGCCACAAAGTGGATGTGGGGGTCATGTGGAG
GATGTTAGACGTCAAGTCAATGAAGCAGTTCAATCACGCCATAAAGTTGACATGATGTATGCTGCATTTACTGGCCAACCTATAGAGAAAGTACAACAATACACG
GAGAGGGATCGGTTTTTGTCTGCTTCCGAGGCGTTAGAGTTTGGGCTTATTGACGTGTGCGGAATCATCTTCTCCAAGCTTTGGTACAGAATATCAAAATTTCGG
TCCGAATTTTCCAGCGCTGTGTGTCGTTTCATTGGTGAACTCCCAAATTCTCTAATCAATGCTCAGGAGCTAGCAATTGAGAACACGATGAGATGATTCCTATAT
TCATTCTCATTCTTGTCAAAATTCTTGTTCTTGAAAAAACATGTATTCTTGAACTCTCACCTTGTCCAGGGCTTCAACATTAAGAATTCATCCTGATAGCAACTT
GAAAAATAGAGTACACTGAAAGCAGGTTTGGAAGCTGTTCTCAAATTTTAGATAGATTG
Protein sequenceShow/hide protein sequence
MVVASAFTASLSFSVSSHNRTSSISQLSRRNSHRSIVSALPRPYGDPSTIGLSSKTMGAPLNLDDKDFLLTSTSYGPIEAKKGNPSIMPAVMTPGGPLDLSSVLF
RNRIIFIGQPVNSIVAQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSRIMIHQPQSGCG
GHVEDVRRQVNEAVQSRHKVDMMYAAFTGQPIEKVQQYTERDRFLSASEALEFGLIDVCGIIFSKLWYRISKFRSEFSSAVCRFIGELPNSLINAQELAIENTMR